RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 GSX1Q9H4S2 264 aaPredicted RBP12.96□□□□□ -0.34
CIRBP-228ENST00000590347 NRN1Q9NPD7 142 aa12.96□□□□□ -0.34
CIRBP-228ENST00000590347 SLC45A2Q9UMX9 530 aa12.96□□□□□ -0.34
CIRBP-228ENST00000590347 VAMP5O95183 116 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 ZNF90Q03938 601 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 RIPPLY2Q5TAB7 128 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 C1orf174Q8IYL3 243 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 ZNF525Q8N782 197 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 P2RX4Q99571 388 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 MEGF9Q9H1U4 602 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 DECR2Q9NUI1 292 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 PSENENQ9NZ42 101 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 CACNG5Q9UF02 275 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 ST3GAL6Q9Y274 331 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 ADAMTS9Q9P2N4 1935 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 NPIPB7O75200 414 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 TSPOP30536 169 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 KRTCAP3Q53RY4 240 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 MRGPRDQ8TDS7 321 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 MBD3L1Q8WWY6 194 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 UHRF2Q96PU4 802 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 SPIN2AQ99865 258 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 SPIN2BQ9BPZ2 258 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 AGMATQ9BSE5 352 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 ELOVL5Q9NYP7 299 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 CLN8Q9UBY8 286 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 IGHV2-70DA0A0C4DH43 119 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 VSTM2BA6NLU5 285 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 C11orf94C9JXX5 98 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 TCL1AP56279 114 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 H1FNTQ75WM6 255 aaPredicted RBP12.95□□□□□ -0.34
CIRBP-228ENST00000590347 LINC01551Q86U37 167 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 SMRP1Q8NCR6 262 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 IL19Q9UHD0 177 aa12.95□□□□□ -0.34
CIRBP-228ENST00000590347 IGKV1-12A0A0C4DH73 117 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 IGKV1D-12P01611 117 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 CD38P28907 300 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 SNAI3Q3KNW1 292 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 HLA-DQA1Q5Y7H0 255 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 GNB4Q9HAV0 340 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 ZNF586Q9NXT0 402 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 BET1LQ9NYM9 111 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 SNURFLB1AK76 121 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 TNFSF14O43557 240 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 PSG2P11465 335 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 CD46P15529 392 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 TNFSF4P23510 183 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 HLA-DRB5Q30154 266 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 NMSQ5H8A3 153 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 AMMECR1LQ6DCA0 310 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 OR4B1Q8NGF8 309 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 LRFN3Q9BTN0 628 aa12.94□□□□□ -0.34
CIRBP-228ENST00000590347 PATE4P0C8F1 98 aa12.93□□□□□ -0.34
CIRBP-228ENST00000590347 SRP14P37108 136 aaKnown RBP12.93□□□□□ -0.34
CIRBP-228ENST00000590347 CTRLP40313 264 aa12.93□□□□□ -0.34
CIRBP-228ENST00000590347 SLC37A2Q8TED4 501 aa12.93□□□□□ -0.34
CIRBP-228ENST00000590347 ANAPC16Q96DE5 110 aa12.93□□□□□ -0.34
CIRBP-228ENST00000590347 DAP3P51398 398 aaKnown RBP12.93□□□□□ -0.34
CIRBP-228ENST00000590347 UBE2NP61088 152 aaKnown RBP12.93□□□□□ -0.34
CIRBP-228ENST00000590347 Q56UQ5 140 aa12.93□□□□□ -0.34
CIRBP-228ENST00000590347 AGBL5Q8NDL9 886 aa12.93□□□□□ -0.34
CIRBP-228ENST00000590347 USF3Q68DE3 2245 aa12.93□□□□□ -0.34
CIRBP-228ENST00000590347 A0A1W2PRS3 328 aa12.93□□□□□ -0.34
CIRBP-228ENST00000590347 TYMSP04818 313 aa12.93□□□□□ -0.34
CIRBP-228ENST00000590347 GNB1P62873 340 aa12.93□□□□□ -0.34
CIRBP-228ENST00000590347 SSC4DQ8WTU2 575 aa12.93□□□□□ -0.34
CIRBP-228ENST00000590347 PINX1Q96BK5 328 aaKnown RBP12.93□□□□□ -0.34
CIRBP-228ENST00000590347 NAA38Q9BRA0 125 aaKnown RBP12.93□□□□□ -0.34
CIRBP-228ENST00000590347 TM2D1Q9BX74 207 aa12.93□□□□□ -0.34
CIRBP-228ENST00000590347 IL36RNQ9UBH0 155 aa12.93□□□□□ -0.34
CIRBP-228ENST00000590347 A0A0J9YY10 115 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 CBR3O75828 277 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 C3orf79P0CE67 100 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 GLB1P16278 677 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 KITLGP21583 273 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 VDAC1P21796 283 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 OOSP2Q86WS3 158 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 OR10G9Q8NGN4 311 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 OR10G7Q8NGN6 311 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 NEIL1Q96FI4 390 aaPredicted RBP12.92□□□□□ -0.34
CIRBP-228ENST00000590347 ZNF430Q9H8G1 570 aaPredicted RBP12.92□□□□□ -0.34
CIRBP-228ENST00000590347 TRBV20OR9-2A0A075B6H5 130 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 TRAV38-1A0A0B4J264 116 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 PRR19A6NJB7 356 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 IGHV4-34P06331 123 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 DRD1P21728 446 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 NPBWR2P48146 333 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 TFF3Q07654 80 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 MPV17L2Q567V2 206 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 IL1F10Q8WWZ1 152 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 SARAFQ96BY9 339 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 HS3ST6Q96QI5 342 aa12.92□□□□□ -0.34
CIRBP-228ENST00000590347 PRRC2CQ9Y520 2896 aaKnown RBP12.92□□□□□ -0.34
CIRBP-228ENST00000590347 TOMM40O96008 361 aa12.91□□□□□ -0.34
CIRBP-228ENST00000590347 PNRC2Q9NPJ4 139 aaKnown RBP12.91□□□□□ -0.34
CIRBP-228ENST00000590347 CLEC18AA5D8T8 446 aa12.91□□□□□ -0.34
CIRBP-228ENST00000590347 SMPD2O60906 423 aa12.91□□□□□ -0.34
CIRBP-228ENST00000590347 CDC34P49427 236 aaPredicted RBP12.91□□□□□ -0.34
CIRBP-228ENST00000590347 PAFAH1B2P68402 229 aa12.91□□□□□ -0.34
CIRBP-228ENST00000590347 STPG3Q8N7X2 389 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms