RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	CABLES2	Q9BTV7	478 aa		13.7	□□□□□ -0.22
MBD1-221	ENST00000589867	MGAT4A	Q9UM21	535 aa		13.7	□□□□□ -0.22
MBD1-221	ENST00000589867	METTL21EP	A6NDL7	271 aa		13.69	□□□□□ -0.22
MBD1-221	ENST00000589867	SERPINE3	A8MV23	424 aa		13.69	□□□□□ -0.22
MBD1-221	ENST00000589867		M0QZ24	198 aa		13.69	□□□□□ -0.22
MBD1-221	ENST00000589867	AIRE	O43918	545 aa		13.69	□□□□□ -0.22
MBD1-221	ENST00000589867	FBXO24	O75426	580 aa		13.69	□□□□□ -0.22
MBD1-221	ENST00000589867	MOS	P00540	346 aa		13.69	□□□□□ -0.22
MBD1-221	ENST00000589867	GSTT2	P0CG29	244 aa		13.69	□□□□□ -0.22
MBD1-221	ENST00000589867	GSTT2B	P0CG30	244 aa		13.69	□□□□□ -0.22
MBD1-221	ENST00000589867	CEACAM6	P40199	344 aa		13.69	□□□□□ -0.22
MBD1-221	ENST00000589867	CD83	Q01151	205 aa		13.69	□□□□□ -0.22
MBD1-221	ENST00000589867	ZNF260	Q3ZCT1	412 aa		13.69	□□□□□ -0.22
MBD1-221	ENST00000589867	CDNF	Q49AH0	187 aa		13.69	□□□□□ -0.22
MBD1-221	ENST00000589867	CITED2	Q99967	270 aa	Predicted RBP	13.69	□□□□□ -0.22
MBD1-221	ENST00000589867	RHBDL2	Q9NX52	303 aa		13.69	□□□□□ -0.22
MBD1-221	ENST00000589867	FABP7	O15540	132 aa		13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	SSX5	O60225	188 aa		13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	IGHG2	P01859	326 aa		13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	CT45A6	P0DMU7	189 aa		13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	CT45A5	P0DMU8	189 aa		13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	CT45A7	P0DMV0	189 aa		13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	ZBTB25	P24278	435 aa		13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	CNTFR	P26992	372 aa		13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	RPS19	P39019	145 aa	Known RBP	13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	LINC00205	P59089	165 aa		13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	LSM3	P62310	102 aa	Known RBP	13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	IDNK	Q5T6J7	187 aa		13.68	□□□□□ -0.22
MBD1-221	ENST00000589867		Q6ZS49	121 aa		13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	FAM71E2	Q8N5Q1	922 aa		13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	OR5AU1	Q8NGC0	362 aa		13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	OR4A4P	Q8NGN8	299 aa		13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	C5orf30	Q96GV9	206 aa		13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	NOL4L	Q96MY1	436 aa	Predicted RBP	13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	S1PR3	Q99500	378 aa		13.68	□□□□□ -0.22
MBD1-221	ENST00000589867	SRSF7	Q16629	238 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
MBD1-221	ENST00000589867	C9orf152	Q5JTZ5	239 aa		13.67	□□□□□ -0.22
MBD1-221	ENST00000589867	HACD4	Q5VWC8	232 aa		13.67	□□□□□ -0.22
MBD1-221	ENST00000589867	FAM71F2	Q6NXP2	309 aa		13.67	□□□□□ -0.22
MBD1-221	ENST00000589867	OR13F1	Q8NGS4	319 aa		13.67	□□□□□ -0.22
MBD1-221	ENST00000589867	FUNDC2	Q9BWH2	189 aa		13.67	□□□□□ -0.22
MBD1-221	ENST00000589867	ABCG5	Q9H222	651 aa		13.67	□□□□□ -0.22
MBD1-221	ENST00000589867	MMP27	Q9H306	513 aa		13.67	□□□□□ -0.22
MBD1-221	ENST00000589867	RDH8	Q9NYR8	311 aa		13.67	□□□□□ -0.22
MBD1-221	ENST00000589867	RNF150	Q9ULK6	438 aa		13.67	□□□□□ -0.22
MBD1-221	ENST00000589867	TRBV6-7	A0A0A0MS04	114 aa		13.66	□□□□□ -0.22
MBD1-221	ENST00000589867	TMEM235	A6NFC5	223 aa		13.66	□□□□□ -0.22
MBD1-221	ENST00000589867	RAB29	O14966	203 aa		13.66	□□□□□ -0.22
MBD1-221	ENST00000589867	SCAND1	P57086	179 aa		13.66	□□□□□ -0.22
MBD1-221	ENST00000589867	NCS1	P62166	190 aa		13.66	□□□□□ -0.22
MBD1-221	ENST00000589867	C2orf68	Q2NKX9	166 aa		13.66	□□□□□ -0.22
MBD1-221	ENST00000589867	TIMM50	Q3ZCQ8	353 aa		13.66	□□□□□ -0.22
MBD1-221	ENST00000589867	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.66	□□□□□ -0.22
MBD1-221	ENST00000589867	GLDN	Q6ZMI3	551 aa	Predicted RBP	13.66	□□□□□ -0.22
MBD1-221	ENST00000589867	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.66	□□□□□ -0.22
MBD1-221	ENST00000589867	NUDCD2	Q8WVJ2	157 aa		13.66	□□□□□ -0.22
MBD1-221	ENST00000589867	HSPB9	Q9BQS6	159 aa		13.66	□□□□□ -0.22
MBD1-221	ENST00000589867	NAA50	Q9GZZ1	169 aa	Known RBP	13.66	□□□□□ -0.22
MBD1-221	ENST00000589867	PIPOX	Q9P0Z9	390 aa		13.66	□□□□□ -0.22
MBD1-221	ENST00000589867	LINC00527	Q9UJ94	153 aa		13.66	□□□□□ -0.22
MBD1-221	ENST00000589867	ETV7	Q9Y603	341 aa		13.66	□□□□□ -0.22
MBD1-221	ENST00000589867	PRKDC	P78527	4128 aa	Known RBP	13.66	□□□□□ -0.22
MBD1-221	ENST00000589867	NCBP2L	A6PVI3	153 aa	Known RBP	13.65	□□□□□ -0.22
MBD1-221	ENST00000589867		H0YJW9	148 aa		13.65	□□□□□ -0.22
MBD1-221	ENST00000589867	GSTP1	P09211	210 aa	Known RBP	13.65	□□□□□ -0.22
MBD1-221	ENST00000589867	CSF1	P09603	554 aa		13.65	□□□□□ -0.22
MBD1-221	ENST00000589867	DTYMK	P23919	212 aa		13.65	□□□□□ -0.22
MBD1-221	ENST00000589867	GPR12	P47775	334 aa		13.65	□□□□□ -0.22
MBD1-221	ENST00000589867	ARFRP1	Q13795	201 aa		13.65	□□□□□ -0.22
MBD1-221	ENST00000589867	NDUFA11	Q86Y39	141 aa		13.65	□□□□□ -0.22
MBD1-221	ENST00000589867	VCX3A	Q9NNX9	186 aa		13.65	□□□□□ -0.22
MBD1-221	ENST00000589867	LIN7C	Q9NUP9	197 aa	Known RBP	13.65	□□□□□ -0.22
MBD1-221	ENST00000589867	SPATA2	Q9UM82	520 aa		13.65	□□□□□ -0.22
MBD1-221	ENST00000589867	BET1	O15155	118 aa		13.64	□□□□□ -0.23
MBD1-221	ENST00000589867	HSPA12A	O43301	675 aa		13.64	□□□□□ -0.23
MBD1-221	ENST00000589867	DIRAS3	O95661	229 aa		13.64	□□□□□ -0.23
MBD1-221	ENST00000589867	ACTB	P60709	375 aa		13.64	□□□□□ -0.23
MBD1-221	ENST00000589867	KIR2DS1	Q14954	304 aa		13.64	□□□□□ -0.23
MBD1-221	ENST00000589867	NSUN5P1	Q3KNT7	163 aa		13.64	□□□□□ -0.23
MBD1-221	ENST00000589867	FAM131A	Q6UXB0	335 aa		13.64	□□□□□ -0.23
MBD1-221	ENST00000589867	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.64	□□□□□ -0.23
MBD1-221	ENST00000589867	ZNF329	Q86UD4	541 aa		13.64	□□□□□ -0.23
MBD1-221	ENST00000589867	ZNF383	Q8NA42	475 aa		13.64	□□□□□ -0.23
MBD1-221	ENST00000589867	OR8H1	Q8NGG4	311 aa		13.64	□□□□□ -0.23
MBD1-221	ENST00000589867	OR5AN1	Q8NGI8	311 aa		13.64	□□□□□ -0.23
MBD1-221	ENST00000589867	EDARADD	Q8WWZ3	215 aa		13.64	□□□□□ -0.23
MBD1-221	ENST00000589867	PEX14	O75381	377 aa		13.63	□□□□□ -0.23
MBD1-221	ENST00000589867	PTHLH	P12272	177 aa		13.63	□□□□□ -0.23
MBD1-221	ENST00000589867	SERPINB10	P48595	397 aa		13.63	□□□□□ -0.23
MBD1-221	ENST00000589867	ARL6IP1	Q15041	203 aa		13.63	□□□□□ -0.23
MBD1-221	ENST00000589867	PNLIPRP3	Q17RR3	467 aa		13.63	□□□□□ -0.23
MBD1-221	ENST00000589867	SLC35E3	Q7Z769	313 aa		13.63	□□□□□ -0.23
MBD1-221	ENST00000589867	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.63	□□□□□ -0.23
MBD1-221	ENST00000589867	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.63	□□□□□ -0.23
MBD1-221	ENST00000589867	NPB	Q8NG41	125 aa		13.63	□□□□□ -0.23
MBD1-221	ENST00000589867	ZNF107	Q9UII5	783 aa	Predicted RBP	13.63	□□□□□ -0.23
MBD1-221	ENST00000589867	TRAV18	A0A075B6X5	111 aa		13.62	□□□□□ -0.23
MBD1-221	ENST00000589867	NDUFA3	O95167	84 aa		13.62	□□□□□ -0.23
MBD1-221	ENST00000589867	TFAP2A	P05549	437 aa		13.62	□□□□□ -0.23
MBD1-221	ENST00000589867	ALDH3B2	P48448	385 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms