RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 FAM157CP0CG43 387 aa11.04□□□□□ -0.64
VMP1-210ENST00000589823 CD40LGP29965 261 aa11.04□□□□□ -0.64
VMP1-210ENST00000589823 FAUP35544 74 aaKnown RBP11.04□□□□□ -0.64
VMP1-210ENST00000589823 ARHGDIBP52566 201 aa11.04□□□□□ -0.64
VMP1-210ENST00000589823 PPP5CP53041 499 aa11.04□□□□□ -0.64
VMP1-210ENST00000589823 HERV-K104P61576 105 aa11.04□□□□□ -0.64
VMP1-210ENST00000589823 SSX2Q16385 188 aa11.04□□□□□ -0.64
VMP1-210ENST00000589823 ZNF57Q68EA5 555 aaPredicted RBP11.04□□□□□ -0.64
VMP1-210ENST00000589823 CCDC144NLQ6NUI1 221 aa11.04□□□□□ -0.64
VMP1-210ENST00000589823 OR8U1Q8NH10 309 aa11.04□□□□□ -0.64
VMP1-210ENST00000589823 TRIM63Q969Q1 353 aa11.04□□□□□ -0.64
VMP1-210ENST00000589823 ZDHHC16Q969W1 377 aa11.04□□□□□ -0.64
VMP1-210ENST00000589823 SLC6A7Q99884 636 aa11.04□□□□□ -0.64
VMP1-210ENST00000589823 ZNF2Q9BSG1 426 aaPredicted RBP11.04□□□□□ -0.64
VMP1-210ENST00000589823 CCDC32Q9BV29 185 aa11.04□□□□□ -0.64
VMP1-210ENST00000589823 IFI27L2Q9H2X8 130 aa11.04□□□□□ -0.64
VMP1-210ENST00000589823 HILPDAQ9Y5L2 63 aa11.04□□□□□ -0.64
VMP1-210ENST00000589823 OOSP1A8MZH6 123 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 DISC1C4P0D8 188 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 HSD17B6O14756 317 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 TUSC2O75896 110 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 PPYP01298 95 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 GAPDHP04406 335 aaKnown RBP11.03□□□□□ -0.64
VMP1-210ENST00000589823 AADACP22760 399 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 GPR12P47775 334 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 ZNF137PP52743 207 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 FXYD4P59646 89 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 LSAMPQ13449 338 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 BAK1Q16611 211 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 DEFB112Q30KQ8 113 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 LDLRAD2Q5SZI1 272 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 DHRS11Q6UWP2 260 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 RBMS3Q6XE24 437 aaKnown RBP11.03□□□□□ -0.64
VMP1-210ENST00000589823 ARRDC1Q8N5I2 433 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 C17orf50Q8WW18 174 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 ABHD14BQ96IU4 210 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 S1PR3Q99500 378 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 SDHCQ99643 169 aaPredicted RBP11.03□□□□□ -0.64
VMP1-210ENST00000589823 AGMATQ9BSE5 352 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 TINAGL1Q9GZM7 467 aaPredicted RBP11.03□□□□□ -0.64
VMP1-210ENST00000589823 OR2D2Q9H210 308 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 OCEL1Q9H607 264 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 RNF150Q9ULK6 438 aa11.03□□□□□ -0.64
VMP1-210ENST00000589823 SOX21Q9Y651 276 aaPredicted RBP11.03□□□□□ -0.64
VMP1-210ENST00000589823 SAA2-SAA4A0A096LPE2 208 aa11.02□□□□□ -0.65
VMP1-210ENST00000589823 MDFIC2A0A1B0GVS7 189 aa11.02□□□□□ -0.65
VMP1-210ENST00000589823 LY6LH3BQJ8 138 aa11.02□□□□□ -0.65
VMP1-210ENST00000589823 TXNL1O43396 289 aa11.02□□□□□ -0.65
VMP1-210ENST00000589823 SLC22A5O76082 557 aa11.02□□□□□ -0.65
VMP1-210ENST00000589823 AMY2AP04746 511 aa11.02□□□□□ -0.65
VMP1-210ENST00000589823 SAA2P0DJI9 122 aaPredicted RBP11.02□□□□□ -0.65
VMP1-210ENST00000589823 IL7P13232 177 aa11.02□□□□□ -0.65
VMP1-210ENST00000589823 KLF9Q13886 244 aaPredicted RBP11.02□□□□□ -0.65
VMP1-210ENST00000589823 FAM71F2Q6NXP2 309 aa11.02□□□□□ -0.65
VMP1-210ENST00000589823 TGIF2LXQ8IUE1 241 aa11.02□□□□□ -0.65
VMP1-210ENST00000589823 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.02□□□□□ -0.65
VMP1-210ENST00000589823 OR4C16Q8NGL9 310 aa11.02□□□□□ -0.65
VMP1-210ENST00000589823 ZNF418Q8TF45 676 aaPredicted RBP11.02□□□□□ -0.65
VMP1-210ENST00000589823 DEDD2Q8WXF8 326 aa11.02□□□□□ -0.65
VMP1-210ENST00000589823 MEGF9Q9H1U4 602 aa11.02□□□□□ -0.65
VMP1-210ENST00000589823 NAV3Q8IVL0 2385 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 REG1BP48304 166 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 ZNF816Q0VGE8 651 aaPredicted RBP11.01□□□□□ -0.65
VMP1-210ENST00000589823 SCGB2B2Q4G0G5 96 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 PLA1AQ53H76 456 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 ZNF660Q6AZW8 331 aaPredicted RBP11.01□□□□□ -0.65
VMP1-210ENST00000589823 FAAP20Q6NZ36 180 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 ODF3L1Q8IXM7 274 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 OR8H3Q8N146 312 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 ZNF645Q8N7E2 425 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 SIGLECL1Q8N7X8 197 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 OR4D10Q8NGI6 311 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 OR56B4Q8NH76 319 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 SECTM1Q8WVN6 248 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 RTN4IP1Q8WWV3 396 aaPredicted RBP11.01□□□□□ -0.65
VMP1-210ENST00000589823 ST6GALNAC6Q969X2 333 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 AJUBAQ96IF1 538 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 TSC22D3Q99576 134 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 SLC5A7Q9GZV3 580 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 ABCB10Q9NRK6 738 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 MCUBQ9NWR8 336 aa11.01□□□□□ -0.65
VMP1-210ENST00000589823 NSD1Q96L73 2696 aaPredicted RBP11.01□□□□□ -0.65
VMP1-210ENST00000589823 IGKV1D-13A0A0B4J2D9 117 aa11□□□□□ -0.65
VMP1-210ENST00000589823 BTBD17A6NE02 478 aa11□□□□□ -0.65
VMP1-210ENST00000589823 CENPXA8MT69 81 aa11□□□□□ -0.65
VMP1-210ENST00000589823 IGKV1-13P0DP09 117 aa11□□□□□ -0.65
VMP1-210ENST00000589823 PAX6P26367 422 aa11□□□□□ -0.65
VMP1-210ENST00000589823 BRS3P32247 399 aa11□□□□□ -0.65
VMP1-210ENST00000589823 DIAPH2-AS1Q14236 149 aa11□□□□□ -0.65
VMP1-210ENST00000589823 LRRC75BQ2VPJ9 315 aa11□□□□□ -0.65
VMP1-210ENST00000589823 RPL39P5Q59GN2 51 aa11□□□□□ -0.65
VMP1-210ENST00000589823 LPCAT3Q6P1A2 487 aa11□□□□□ -0.65
VMP1-210ENST00000589823 Q6YL49 198 aa11□□□□□ -0.65
VMP1-210ENST00000589823 ZNF833PQ6ZTB9 187 aa11□□□□□ -0.65
VMP1-210ENST00000589823 MOB3BQ86TA1 216 aa11□□□□□ -0.65
VMP1-210ENST00000589823 LDLRAD3Q86YD5 345 aa11□□□□□ -0.65
VMP1-210ENST00000589823 DYNAPQ8N1N2 210 aa11□□□□□ -0.65
VMP1-210ENST00000589823 BORCS5Q969J3 196 aa11□□□□□ -0.65
VMP1-210ENST00000589823 MOB3AQ96BX8 217 aa11□□□□□ -0.65
VMP1-210ENST00000589823 ZNF48Q96MX3 618 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms