RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 EPHA1P21709 976 aa12.32□□□□□ -0.44
ATG4D-211ENST00000589753 IL3RAP26951 378 aa12.32□□□□□ -0.44
ATG4D-211ENST00000589753 FXYD4P59646 89 aa12.32□□□□□ -0.44
ATG4D-211ENST00000589753 SCGB2B2Q4G0G5 96 aa12.32□□□□□ -0.44
ATG4D-211ENST00000589753 MINOS1Q5TGZ0 78 aa12.32□□□□□ -0.44
ATG4D-211ENST00000589753 LHFPL4Q7Z7J7 247 aa12.32□□□□□ -0.44
ATG4D-211ENST00000589753 AGMATQ9BSE5 352 aa12.32□□□□□ -0.44
ATG4D-211ENST00000589753 BEX2Q9BXY8 128 aa12.32□□□□□ -0.44
ATG4D-211ENST00000589753 MS4A7Q9GZW8 240 aaPredicted RBP12.32□□□□□ -0.44
ATG4D-211ENST00000589753 GHITMQ9H3K2 345 aa12.32□□□□□ -0.44
ATG4D-211ENST00000589753 PIPOXQ9P0Z9 390 aa12.32□□□□□ -0.44
ATG4D-211ENST00000589753 DPM3Q9P2X0 92 aa12.32□□□□□ -0.44
ATG4D-211ENST00000589753 CDC42EP3Q9UKI2 254 aa12.32□□□□□ -0.44
ATG4D-211ENST00000589753 RNF150Q9ULK6 438 aa12.32□□□□□ -0.44
ATG4D-211ENST00000589753 MINOS1-NBL1R4GNA1 71 aa12.32□□□□□ -0.44
ATG4D-211ENST00000589753 IGKV1D-13A0A0B4J2D9 117 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 CENPXA8MT69 81 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 LEUTXA8MZ59 168 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 RAB29O14966 203 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 IGKV1-13P0DP09 117 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 CEACAM3P40198 252 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 GPR12P47775 334 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 LDLRAD2Q5SZI1 272 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 LDLRAD3Q86YD5 345 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 ODF3L1Q8IXM7 274 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 OR51S1Q8NGJ8 323 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 BORCS5Q969J3 196 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 MOB3AQ96BX8 217 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 ABHD14BQ96IU4 210 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 PRRT1Q99946 306 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 C7orf50Q9BRJ6 194 aaKnown RBP12.31□□□□□ -0.44
ATG4D-211ENST00000589753 OR2D2Q9H210 308 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 SCP2D1Q9UJQ7 156 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 ZNF221Q9UK13 617 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 ACANP16112 2415 aa12.31□□□□□ -0.44
ATG4D-211ENST00000589753 SAA2-SAA4A0A096LPE2 208 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 A0A0U1RQK1 487 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 NAP1L6A6NFF2 107 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 OR5H14A6NHG9 310 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 INAFM1C9JVW0 142 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 LY6LH3BQJ8 138 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 SAA2P0DJI9 122 aaPredicted RBP12.3□□□□□ -0.44
ATG4D-211ENST00000589753 ZNF137PP52743 207 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 TPTE2P1Q5T6R2 138 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 AADACL3Q5VUY0 350 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 C9orf139Q6ZV77 190 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 LHFPL1Q86WI0 220 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 TERB2Q8NHR7 220 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 SECTM1Q8WVN6 248 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 C17orf50Q8WW18 174 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 TOMM40LQ969M1 308 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 RPEQ96AT9 228 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 MALSU1Q96EH3 234 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 S1PR3Q99500 378 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 SLC5A7Q9GZV3 580 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 FXYD6Q9H0Q3 95 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 SLC2A8Q9NY64 477 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 FAM96BQ9Y3D0 163 aa12.3□□□□□ -0.44
ATG4D-211ENST00000589753 HIVEP1P15822 2718 aa12.29□□□□□ -0.44
ATG4D-211ENST00000589753 HSD17B6O14756 317 aa12.29□□□□□ -0.44
ATG4D-211ENST00000589753 PLA2G10O15496 165 aa12.29□□□□□ -0.44
ATG4D-211ENST00000589753 SLC22A5O76082 557 aa12.29□□□□□ -0.44
ATG4D-211ENST00000589753 IFITM3Q01628 133 aa12.29□□□□□ -0.44
ATG4D-211ENST00000589753 C16orf87Q6PH81 154 aa12.29□□□□□ -0.44
ATG4D-211ENST00000589753 IDO2Q6ZQW0 420 aa12.29□□□□□ -0.44
ATG4D-211ENST00000589753 BCL6BQ8N143 479 aaPredicted RBP12.29□□□□□ -0.44
ATG4D-211ENST00000589753 ZNF645Q8N7E2 425 aa12.29□□□□□ -0.44
ATG4D-211ENST00000589753 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.29□□□□□ -0.44
ATG4D-211ENST00000589753 C22orf15Q8WYQ4 148 aa12.29□□□□□ -0.44
ATG4D-211ENST00000589753 ST6GALNAC6Q969X2 333 aa12.29□□□□□ -0.44
ATG4D-211ENST00000589753 AJUBAQ96IF1 538 aa12.29□□□□□ -0.44
ATG4D-211ENST00000589753 GAB2Q9UQC2 676 aa12.29□□□□□ -0.44
ATG4D-211ENST00000589753 HILPDAQ9Y5L2 63 aa12.29□□□□□ -0.44
ATG4D-211ENST00000589753 SOX21Q9Y651 276 aaPredicted RBP12.29□□□□□ -0.44
ATG4D-211ENST00000589753 CSPG4Q6UVK1 2322 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 OOSP1A8MZH6 123 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 LYRM1O43325 122 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 GAPDHP04406 335 aaKnown RBP12.28□□□□□ -0.44
ATG4D-211ENST00000589753 SRD5A1P18405 259 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 ECI1P42126 302 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 UCP3P55916 312 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 ZNF816Q0VGE8 651 aaPredicted RBP12.28□□□□□ -0.44
ATG4D-211ENST00000589753 SCGB2A2Q13296 93 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 DIAPH2-AS1Q14236 149 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 SSX2Q16385 188 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 RPL39P5Q59GN2 51 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 FAM71F2Q6NXP2 309 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 LPCAT3Q6P1A2 487 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 ZNF833PQ6ZTB9 187 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 TGIF2LXQ8IUE1 241 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 DYNAPQ8N1N2 210 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 ZNF251Q9BRH9 671 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 CCL28Q9NRJ3 127 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 SDHAF2Q9NX18 166 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 TBC1D24Q9ULP9 559 aa12.28□□□□□ -0.44
ATG4D-211ENST00000589753 TXNL1O43396 289 aa12.27□□□□□ -0.45
ATG4D-211ENST00000589753 IGLV2-14P01704 120 aa12.27□□□□□ -0.45
ATG4D-211ENST00000589753 FBP1P09467 338 aa12.27□□□□□ -0.45
ATG4D-211ENST00000589753 PGAM2P15259 253 aa12.27□□□□□ -0.45
ATG4D-211ENST00000589753 REG1BP48304 166 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms