RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 PITPNAQ00169 270 aa10.78□□□□□ -0.68
VMP1-209ENST00000588915 NDPQ00604 133 aa10.78□□□□□ -0.68
VMP1-209ENST00000588915 ECSCRQ19T08 205 aa10.78□□□□□ -0.68
VMP1-209ENST00000588915 C6orf141Q5SZD1 244 aa10.78□□□□□ -0.68
VMP1-209ENST00000588915 ZNF485Q8NCK3 441 aa10.78□□□□□ -0.68
VMP1-209ENST00000588915 ZNF555Q8NEP9 628 aa10.78□□□□□ -0.68
VMP1-209ENST00000588915 TMEM80Q96HE8 168 aa10.78□□□□□ -0.68
VMP1-209ENST00000588915 ELOVL1Q9BW60 279 aa10.78□□□□□ -0.68
VMP1-209ENST00000588915 ALX4Q9H161 411 aaPredicted RBP10.78□□□□□ -0.68
VMP1-209ENST00000588915 IFI27L2Q9H2X8 130 aa10.78□□□□□ -0.68
VMP1-209ENST00000588915 ABRACLQ9P1F3 81 aa10.78□□□□□ -0.68
VMP1-209ENST00000588915 STEAP1Q9UHE8 339 aa10.78□□□□□ -0.68
VMP1-209ENST00000588915 FBXO7Q9Y3I1 522 aa10.78□□□□□ -0.68
VMP1-209ENST00000588915 LYSTQ99698 3801 aa10.77□□□□□ -0.68
VMP1-209ENST00000588915 RAB29O14966 203 aa10.77□□□□□ -0.69
VMP1-209ENST00000588915 HSPA12AO43301 675 aa10.77□□□□□ -0.69
VMP1-209ENST00000588915 UBBP0CG47 229 aa10.77□□□□□ -0.69
VMP1-209ENST00000588915 EGR2P11161 476 aaPredicted RBP10.77□□□□□ -0.69
VMP1-209ENST00000588915 OR3A3P47888 321 aa10.77□□□□□ -0.69
VMP1-209ENST00000588915 HMGN3Q15651 99 aa10.77□□□□□ -0.69
VMP1-209ENST00000588915 ACTBL2Q562R1 376 aa10.77□□□□□ -0.69
VMP1-209ENST00000588915 Q8N1Y9 231 aa10.77□□□□□ -0.69
VMP1-209ENST00000588915 ARPC1AQ92747 370 aa10.77□□□□□ -0.69
VMP1-209ENST00000588915 RHOVQ96L33 236 aa10.77□□□□□ -0.69
VMP1-209ENST00000588915 NEDD4LQ96PU5 975 aa10.77□□□□□ -0.69
VMP1-209ENST00000588915 FBXL15Q9H469 300 aa10.77□□□□□ -0.69
VMP1-209ENST00000588915 CLEC2DQ9UHP7 191 aa10.77□□□□□ -0.69
VMP1-209ENST00000588915 A0A1W2PPK0 400 aa10.76□□□□□ -0.69
VMP1-209ENST00000588915 IGLV1-51P01701 117 aa10.76□□□□□ -0.69
VMP1-209ENST00000588915 GSTP1P09211 210 aaKnown RBP10.76□□□□□ -0.69
VMP1-209ENST00000588915 CT45A6P0DMU7 189 aa10.76□□□□□ -0.69
VMP1-209ENST00000588915 CT45A5P0DMU8 189 aa10.76□□□□□ -0.69
VMP1-209ENST00000588915 CT45A7P0DMV0 189 aa10.76□□□□□ -0.69
VMP1-209ENST00000588915 VEGFCP49767 419 aa10.76□□□□□ -0.69
VMP1-209ENST00000588915 PLGLAQ15195 96 aa10.76□□□□□ -0.69
VMP1-209ENST00000588915 ZNF562Q6V9R5 426 aa10.76□□□□□ -0.69
VMP1-209ENST00000588915 PPP1R27Q86WC6 154 aa10.76□□□□□ -0.69
VMP1-209ENST00000588915 OR5AN1Q8NGI8 311 aa10.76□□□□□ -0.69
VMP1-209ENST00000588915 ISOC1Q96CN7 298 aa10.76□□□□□ -0.69
VMP1-209ENST00000588915 DERL3Q96Q80 235 aa10.76□□□□□ -0.69
VMP1-209ENST00000588915 EDA2RQ9HAV5 297 aa10.76□□□□□ -0.69
VMP1-209ENST00000588915 C19orf73Q9NVV2 129 aa10.76□□□□□ -0.69
VMP1-209ENST00000588915 SMPD3Q9NY59 655 aaPredicted RBP10.76□□□□□ -0.69
VMP1-209ENST00000588915 SLC23A1Q9UHI7 598 aa10.76□□□□□ -0.69
VMP1-209ENST00000588915 STUB1Q9UNE7 303 aa10.76□□□□□ -0.69
VMP1-209ENST00000588915 FCN1O00602 326 aa10.75□□□□□ -0.69
VMP1-209ENST00000588915 BAG2O95816 211 aa10.75□□□□□ -0.69
VMP1-209ENST00000588915 TFAP2AP05549 437 aa10.75□□□□□ -0.69
VMP1-209ENST00000588915 IGHV4-30-4P0DP06 118 aa10.75□□□□□ -0.69
VMP1-209ENST00000588915 MAPK3P27361 379 aaPredicted RBP10.75□□□□□ -0.69
VMP1-209ENST00000588915 LRRC36Q1X8D7 754 aa10.75□□□□□ -0.69
VMP1-209ENST00000588915 MOGAT2Q3SYC2 334 aa10.75□□□□□ -0.69
VMP1-209ENST00000588915 ZNF880Q6PDB4 577 aa10.75□□□□□ -0.69
VMP1-209ENST00000588915 FAM131AQ6UXB0 335 aa10.75□□□□□ -0.69
VMP1-209ENST00000588915 SGPP2Q8IWX5 399 aa10.75□□□□□ -0.69
VMP1-209ENST00000588915 PQLC1Q8N2U9 271 aa10.75□□□□□ -0.69
VMP1-209ENST00000588915 RIMS4Q9H426 269 aaPredicted RBP10.75□□□□□ -0.69
VMP1-209ENST00000588915 S100A14Q9HCY8 104 aa10.75□□□□□ -0.69
VMP1-209ENST00000588915 RANGRFQ9HD47 186 aaPredicted RBP10.75□□□□□ -0.69
VMP1-209ENST00000588915 CNOT2Q9NZN8 540 aaKnown RBP10.75□□□□□ -0.69
VMP1-209ENST00000588915 WASHC3Q9Y3C0 194 aa10.75□□□□□ -0.69
VMP1-209ENST00000588915 CSMD3Q7Z407 3707 aa10.74□□□□□ -0.69
VMP1-209ENST00000588915 H0YJW9 148 aa10.74□□□□□ -0.69
VMP1-209ENST00000588915 H3BUA1 57 aa10.74□□□□□ -0.69
VMP1-209ENST00000588915 SPDEFO95238 335 aa10.74□□□□□ -0.69
VMP1-209ENST00000588915 NAPSAO96009 420 aa10.74□□□□□ -0.69
VMP1-209ENST00000588915 ZP3P21754 424 aa10.74□□□□□ -0.69
VMP1-209ENST00000588915 SRSF7Q16629 238 aaKnown RBP eCLIP10.74□□□□□ -0.69
VMP1-209ENST00000588915 TTC23Q5W5X9 447 aa10.74□□□□□ -0.69
VMP1-209ENST00000588915 UNQ5815/PRO19632Q6UWF5 114 aa10.74□□□□□ -0.69
VMP1-209ENST00000588915 MOB1BQ7L9L4 216 aa10.74□□□□□ -0.69
VMP1-209ENST00000588915 C5orf24Q7Z6I8 188 aa10.74□□□□□ -0.69
VMP1-209ENST00000588915 ANKRD13BQ86YJ7 626 aa10.74□□□□□ -0.69
VMP1-209ENST00000588915 SVOPQ8N4V2 548 aa10.74□□□□□ -0.69
VMP1-209ENST00000588915 ABHD5Q8WTS1 349 aa10.74□□□□□ -0.69
VMP1-209ENST00000588915 EDARADDQ8WWZ3 215 aa10.74□□□□□ -0.69
VMP1-209ENST00000588915 SULT4A1Q9BR01 284 aa10.74□□□□□ -0.69
VMP1-209ENST00000588915 AGMATQ9BSE5 352 aa10.74□□□□□ -0.69
VMP1-209ENST00000588915 STARD9Q9P2P6 4700 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 TRBV6-6A0A0A6YYG2 114 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 EFCAB10A6NFE3 127 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 H7C2Y5 167 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 SLC22A1O15245 554 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 ST8SIA5O15466 376 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 IGHV3-11P01762 117 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 CELP19835 753 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 TPPP2P59282 170 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 RPS27AP62979 156 aaKnown RBP10.73□□□□□ -0.69
VMP1-209ENST00000588915 ZFP41Q8N8Y5 198 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 SETD9Q8NE22 299 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 LFNGQ8NES3 379 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 KCNG3Q8TAE7 436 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 CASTOR1Q8WTX7 329 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 IL1F10Q8WWZ1 152 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 GGHQ92820 318 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 FAM46BQ96A09 425 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 TMEM68Q96MH6 324 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 TSNAXQ99598 290 aaKnown RBP10.73□□□□□ -0.69
VMP1-209ENST00000588915 FAAP24Q9BTP7 215 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 TM2D1Q9BX74 207 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms