RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 SLC2A9Q9NRM0 540 aa11.85□□□□□ -0.51
NPC1-207ENST00000588867 A0A087X0M5 115 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 IGHV2-26A0A0B4J1V2 119 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 TEX13DA0A0J9YY54 714 aaPredicted RBP11.84□□□□□ -0.51
NPC1-207ENST00000588867 A0A1B0GX30 115 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 J3QR06 171 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 ITGB1BP1O14713 200 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 OR4E1P0C645 316 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 DCAF12L2Q5VW00 463 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 SLC25A48Q6ZT89 311 aaKnown RBP11.84□□□□□ -0.51
NPC1-207ENST00000588867 DRAM1Q8N682 238 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 OR13D1Q8NGV5 346 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 ZNF486Q96H40 463 aaPredicted RBP11.84□□□□□ -0.51
NPC1-207ENST00000588867 SEC22CQ9BRL7 303 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 CLEC7AQ9BXN2 247 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 SIRPDQ9H106 197 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 IFI27L2Q9H2X8 130 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 HEXA-AS1Q9H8Q6 139 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 HIF1ANQ9NWT6 349 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 CCDC168Q8NDH2 2452 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 IGLV2-14P01704 120 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 VAMP1P23763 118 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 S100GP29377 79 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 PRRX1P54821 245 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 TAS2R31P59538 309 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 CBX3Q13185 183 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 TMEM249Q2WGJ8 235 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 TMEM128Q5BJH2 165 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 OR52B4Q8NGK2 314 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 OR10X1Q8NGY0 326 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 RTN4IP1Q8WWV3 396 aaPredicted RBP11.84□□□□□ -0.51
NPC1-207ENST00000588867 TMEM230Q96A57 120 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 MSI2Q96DH6 328 aaKnown RBP11.84□□□□□ -0.51
NPC1-207ENST00000588867 AKR1E2Q96JD6 320 aa11.84□□□□□ -0.51
NPC1-207ENST00000588867 ALX4Q9H161 411 aaPredicted RBP11.84□□□□□ -0.51
NPC1-207ENST00000588867 CSMD1Q96PZ7 3565 aa11.83□□□□□ -0.52
NPC1-207ENST00000588867 CR1P17927 2039 aa11.83□□□□□ -0.52
NPC1-207ENST00000588867 A0A0B4J293 547 aa11.83□□□□□ -0.52
NPC1-207ENST00000588867 SMAD7O15105 426 aaKnown RBP11.83□□□□□ -0.52
NPC1-207ENST00000588867 SLC22A5O76082 557 aa11.83□□□□□ -0.52
NPC1-207ENST00000588867 TGFAP01135 160 aa11.83□□□□□ -0.52
NPC1-207ENST00000588867 MECP2P51608 486 aaKnown RBP11.83□□□□□ -0.52
NPC1-207ENST00000588867 PAX8Q06710 450 aa11.83□□□□□ -0.52
NPC1-207ENST00000588867 KLRD1Q13241 179 aa11.83□□□□□ -0.52
NPC1-207ENST00000588867 PPP1R1AQ13522 171 aa11.83□□□□□ -0.52
NPC1-207ENST00000588867 Q3ZCU0 254 aa11.83□□□□□ -0.52
NPC1-207ENST00000588867 FAHD2BQ6P2I3 314 aaPredicted RBP11.83□□□□□ -0.52
NPC1-207ENST00000588867 GLDNQ6ZMI3 551 aaPredicted RBP11.83□□□□□ -0.52
NPC1-207ENST00000588867 CCDC71LQ8N9Z2 235 aa11.83□□□□□ -0.52
NPC1-207ENST00000588867 BVESQ8NE79 360 aa11.83□□□□□ -0.52
NPC1-207ENST00000588867 TMEM186Q96B77 213 aa11.83□□□□□ -0.52
NPC1-207ENST00000588867 FAHD2AQ96GK7 314 aa11.83□□□□□ -0.52
NPC1-207ENST00000588867 C1orf159Q96HA4 380 aa11.83□□□□□ -0.52
NPC1-207ENST00000588867 SDHAF2Q9NX18 166 aa11.83□□□□□ -0.52
NPC1-207ENST00000588867 ALG5Q9Y673 324 aa11.83□□□□□ -0.52
NPC1-207ENST00000588867 A0A1W2PRD5 423 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 A0A1W2PRF3 423 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 A0A1W2PRM7 423 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 RAB29O14966 203 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 PRAF2O60831 178 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 PGLYRP1O75594 196 aaPredicted RBP11.82□□□□□ -0.52
NPC1-207ENST00000588867 HLA-AP01891 365 aaKnown RBP11.82□□□□□ -0.52
NPC1-207ENST00000588867 CD34P28906 385 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 RPL39P5Q59GN2 51 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 TBC1D26Q86UD7 250 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 SGPP2Q8IWX5 399 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 CIARTQ8N365 385 aaPredicted RBP11.82□□□□□ -0.52
NPC1-207ENST00000588867 GPN1Q9HCN4 374 aaPredicted RBP11.82□□□□□ -0.52
NPC1-207ENST00000588867 PIPOXQ9P0Z9 390 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 SAA2-SAA4A0A096LPE2 208 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 A0A0A6YYJ9 748 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 TRAV20A0A0B4J274 112 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 MPPED1O15442 326 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 ARG1P05089 322 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 IL5P05113 134 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 SAA2P0DJI9 122 aaPredicted RBP11.82□□□□□ -0.52
NPC1-207ENST00000588867 IGHV4-31P0DP07 118 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 MMP9P14780 707 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 ZNF16P17020 682 aaPredicted RBP11.82□□□□□ -0.52
NPC1-207ENST00000588867 SLC9A3R2Q15599 337 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 ODF3L1Q8IXM7 274 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 C8orf31Q8N9H6 132 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 CASTOR1Q8WTX7 329 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 FAM216AQ8WUB2 273 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 TNFRSF14Q92956 283 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 LHX4Q969G2 390 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 C5orf30Q96GV9 206 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 TBX15Q96SF7 602 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 C7orf69Q9H7B7 122 aa11.82□□□□□ -0.52
NPC1-207ENST00000588867 CRYM-AS1A6NIL9 109 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 GZMKP49863 264 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 DHODHQ02127 395 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 DHRS2Q13268 280 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 C1orf229Q6ZS94 237 aaPredicted RBP11.81□□□□□ -0.52
NPC1-207ENST00000588867 LINC00311Q8N616 119 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 DRAXINQ8NBI3 349 aaPredicted RBP11.81□□□□□ -0.52
NPC1-207ENST00000588867 ZBTB34Q8NCN2 500 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 OR51H1Q8NH63 302 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 ZNF596Q8TC21 504 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 S1PR3Q99500 378 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms