RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 FCN2Q15485 313 aa18.28■□□□□ 0.52
ATG4D-209ENST00000588857 MITD1Q8WV92 249 aa18.28■□□□□ 0.52
ATG4D-209ENST00000588857 ABHD14AQ9BUJ0 271 aa18.28■□□□□ 0.52
ATG4D-209ENST00000588857 TNFSF12O43508 249 aa18.27■□□□□ 0.52
ATG4D-209ENST00000588857 DEFB113Q30KQ7 82 aa18.27■□□□□ 0.52
ATG4D-209ENST00000588857 TBC1D26Q86UD7 250 aa18.27■□□□□ 0.52
ATG4D-209ENST00000588857 DRAM1Q8N682 238 aa18.27■□□□□ 0.52
ATG4D-209ENST00000588857 ZBTB34Q8NCN2 500 aa18.27■□□□□ 0.52
ATG4D-209ENST00000588857 NEURL2Q9BR09 285 aa18.27■□□□□ 0.52
ATG4D-209ENST00000588857 AGMATQ9BSE5 352 aa18.27■□□□□ 0.52
ATG4D-209ENST00000588857 ONECUT1Q9UBC0 465 aa18.27■□□□□ 0.52
ATG4D-209ENST00000588857 IGHV4-30-2A0A087WSY4 118 aa18.26■□□□□ 0.51
ATG4D-209ENST00000588857 PGLYRP1O75594 196 aaPredicted RBP18.26■□□□□ 0.51
ATG4D-209ENST00000588857 CCNKO75909 580 aa18.26■□□□□ 0.51
ATG4D-209ENST00000588857 IGLV2-14P01704 120 aa18.26■□□□□ 0.51
ATG4D-209ENST00000588857 RBP4P02753 201 aa18.26■□□□□ 0.51
ATG4D-209ENST00000588857 IGHV1-8P0DP01 117 aa18.26■□□□□ 0.51
ATG4D-209ENST00000588857 GPR12P47775 334 aa18.26■□□□□ 0.51
ATG4D-209ENST00000588857 ZNF134P52741 427 aa18.26■□□□□ 0.51
ATG4D-209ENST00000588857 MSMO1Q15800 293 aa18.26■□□□□ 0.51
ATG4D-209ENST00000588857 CLEC12BQ2HXU8 276 aa18.26■□□□□ 0.51
ATG4D-209ENST00000588857 COQ8AQ8NI60 647 aa18.26■□□□□ 0.51
ATG4D-209ENST00000588857 ABHD14BQ96IU4 210 aa18.26■□□□□ 0.51
ATG4D-209ENST00000588857 SUCNR1Q9BXA5 334 aa18.26■□□□□ 0.51
ATG4D-209ENST00000588857 MAP1AP78559 2803 aaPredicted RBP18.26■□□□□ 0.51
ATG4D-209ENST00000588857 C3orf85A0A1B0GTC6 90 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 KIAA1324LA8MWY0 1029 aaPredicted RBP18.25■□□□□ 0.51
ATG4D-209ENST00000588857 SULT1A3P0DMM9 295 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 SULT1A4P0DMN0 295 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 GNG10P50151 68 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 CT45A1Q5HYN5 189 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 UTF1Q5T230 341 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 KCTD9Q7L273 389 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 LRRC75A-AS1Q8N1F1 130 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 CT45A3Q8NHU0 189 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 GALNT14Q96FL9 552 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 SESN1Q9Y6P5 492 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 A0A1W2PPE3 182 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 A8MXK9 166 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 ENSAO43768 121 aaKnown RBP18.25■□□□□ 0.51
ATG4D-209ENST00000588857 ZFP36P26651 326 aaKnown RBP18.25■□□□□ 0.51
ATG4D-209ENST00000588857 LCN2P80188 198 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 Q3ZCU0 254 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 LIN54Q6MZP7 749 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 C11orf42Q8N5U0 333 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 ZNF439Q8NDP4 499 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 OR11H7Q8NGC8 314 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 MBD6Q96DN6 1003 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 GPHA2Q96T91 129 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 FOXC2Q99958 501 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 MGAT4CQ9UBM8 478 aa18.25■□□□□ 0.51
ATG4D-209ENST00000588857 IGHV4-61A0A0C4DH41 118 aa18.24■□□□□ 0.51
ATG4D-209ENST00000588857 RNF212BA8MTL3 300 aa18.24■□□□□ 0.51
ATG4D-209ENST00000588857 SLC31A2O15432 143 aa18.24■□□□□ 0.51
ATG4D-209ENST00000588857 FOXH1O75593 365 aa18.24■□□□□ 0.51
ATG4D-209ENST00000588857 OR5AC1P0C628 307 aa18.24■□□□□ 0.51
ATG4D-209ENST00000588857 SP6Q3SY56 376 aa18.24■□□□□ 0.51
ATG4D-209ENST00000588857 SPNS3Q6ZMD2 512 aa18.24■□□□□ 0.51
ATG4D-209ENST00000588857 DMRTB1Q96MA1 342 aa18.24■□□□□ 0.51
ATG4D-209ENST00000588857 TMEM133Q9H2Q1 129 aa18.24■□□□□ 0.51
ATG4D-209ENST00000588857 IFI27L2Q9H2X8 130 aa18.24■□□□□ 0.51
ATG4D-209ENST00000588857 A0A0B4J2A0 478 aa18.23■□□□□ 0.51
ATG4D-209ENST00000588857 SLC25A16P16260 332 aa18.23■□□□□ 0.51
ATG4D-209ENST00000588857 CXCL3P19876 107 aa18.23■□□□□ 0.51
ATG4D-209ENST00000588857 CD83Q01151 205 aa18.23■□□□□ 0.51
ATG4D-209ENST00000588857 ANKRD55Q3KP44 614 aa18.23■□□□□ 0.51
ATG4D-209ENST00000588857 SLC25A48Q6ZT89 311 aaKnown RBP18.23■□□□□ 0.51
ATG4D-209ENST00000588857 OR51H1Q8NH63 302 aa18.23■□□□□ 0.51
ATG4D-209ENST00000588857 SDHAF2Q9NX18 166 aa18.23■□□□□ 0.51
ATG4D-209ENST00000588857 PRR13Q9NZ81 148 aa18.23■□□□□ 0.51
ATG4D-209ENST00000588857 SHPKQ9UHJ6 478 aa18.23■□□□□ 0.51
ATG4D-209ENST00000588857 A0A087X0M5 115 aa18.22■□□□□ 0.51
ATG4D-209ENST00000588857 A0A1B0GX30 115 aa18.22■□□□□ 0.51
ATG4D-209ENST00000588857 A8MV72 311 aaPredicted RBP18.22■□□□□ 0.51
ATG4D-209ENST00000588857 M0R1W7 72 aa18.22■□□□□ 0.51
ATG4D-209ENST00000588857 RAB29O14966 203 aa18.22■□□□□ 0.51
ATG4D-209ENST00000588857 F2RP25116 425 aa18.22■□□□□ 0.51
ATG4D-209ENST00000588857 ARF6P62330 175 aa18.22■□□□□ 0.51
ATG4D-209ENST00000588857 LYG1Q8N1E2 194 aa18.22■□□□□ 0.51
ATG4D-209ENST00000588857 TP53RKQ96S44 253 aa18.22■□□□□ 0.51
ATG4D-209ENST00000588857 GOSR2O14653 212 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 B3GALNT1O75752 331 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 ZNF16P17020 682 aaPredicted RBP18.21■□□□□ 0.51
ATG4D-209ENST00000588857 TMEM187Q14656 261 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 BTNL3Q6UXE8 466 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 ABHD12Q8N2K0 398 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 C8orf31Q8N9H6 132 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 PIPOXQ9P0Z9 390 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 GAB2Q9UQC2 676 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 MED13LQ71F56 2210 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 WNK2Q9Y3S1 2297 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 H0Y980 276 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 SRPXP78539 464 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 CATR1Q13166 79 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 LIAT1Q6ZQX7 453 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 KIR3DL3Q8N743 410 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.21■□□□□ 0.51
ATG4D-209ENST00000588857 OR9G1Q8NH87 305 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 GLYATL2Q8WU03 294 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 C5orf30Q96GV9 206 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms