RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 SURF2Q15527 256 aaPredicted RBP18.46■□□□□ 0.55
ACTN4-210ENST00000588618 CT45A1Q5HYN5 189 aa18.46■□□□□ 0.55
ACTN4-210ENST00000588618 PLET1Q6UQ28 207 aa18.46■□□□□ 0.55
ACTN4-210ENST00000588618 SLC38A6Q8IZM9 456 aa18.46■□□□□ 0.55
ACTN4-210ENST00000588618 LYG1Q8N1E2 194 aa18.46■□□□□ 0.55
ACTN4-210ENST00000588618 C8orf31Q8N9H6 132 aa18.46■□□□□ 0.55
ACTN4-210ENST00000588618 CT45A3Q8NHU0 189 aa18.46■□□□□ 0.55
ACTN4-210ENST00000588618 ZFAND1Q8TCF1 268 aa18.46■□□□□ 0.55
ACTN4-210ENST00000588618 GHITMQ9H3K2 345 aa18.46■□□□□ 0.55
ACTN4-210ENST00000588618 C14orf166Q9Y224 244 aaKnown RBP18.46■□□□□ 0.55
ACTN4-210ENST00000588618 VSIG4Q9Y279 399 aa18.46■□□□□ 0.55
ACTN4-210ENST00000588618 CSPG4Q6UVK1 2322 aa18.45■□□□□ 0.54
ACTN4-210ENST00000588618 TLN2Q9Y4G6 2542 aa18.45■□□□□ 0.54
ACTN4-210ENST00000588618 SLC22A5O76082 557 aa18.45■□□□□ 0.54
ACTN4-210ENST00000588618 ARG1P05089 322 aa18.45■□□□□ 0.54
ACTN4-210ENST00000588618 HOXB4P17483 251 aaPredicted RBP18.45■□□□□ 0.54
ACTN4-210ENST00000588618 S100GP29377 79 aa18.45■□□□□ 0.54
ACTN4-210ENST00000588618 KLRD1Q13241 179 aa18.45■□□□□ 0.54
ACTN4-210ENST00000588618 ABCA11PQ4W5N1 156 aa18.45■□□□□ 0.54
ACTN4-210ENST00000588618 CCBE1Q6UXH8 406 aaPredicted RBP18.45■□□□□ 0.54
ACTN4-210ENST00000588618 CREB3L1Q96BA8 519 aa18.45■□□□□ 0.54
ACTN4-210ENST00000588618 C18orf12Q96KH6 178 aa18.45■□□□□ 0.54
ACTN4-210ENST00000588618 PIPOXQ9P0Z9 390 aa18.45■□□□□ 0.54
ACTN4-210ENST00000588618 HSD17B6O14756 317 aa18.44■□□□□ 0.54
ACTN4-210ENST00000588618 RLN1P04808 185 aa18.44■□□□□ 0.54
ACTN4-210ENST00000588618 IL3RAP26951 378 aa18.44■□□□□ 0.54
ACTN4-210ENST00000588618 UCP3P55916 312 aa18.44■□□□□ 0.54
ACTN4-210ENST00000588618 TRIM16LQ309B1 348 aa18.44■□□□□ 0.54
ACTN4-210ENST00000588618 CMTM1Q8IZ96 169 aa18.44■□□□□ 0.54
ACTN4-210ENST00000588618 CENPSQ8N2Z9 138 aa18.44■□□□□ 0.54
ACTN4-210ENST00000588618 ZNF645Q8N7E2 425 aa18.44■□□□□ 0.54
ACTN4-210ENST00000588618 BEND2Q8NDZ0 799 aa18.44■□□□□ 0.54
ACTN4-210ENST00000588618 OR11H6Q8NGC7 330 aa18.44■□□□□ 0.54
ACTN4-210ENST00000588618 ABHD14BQ96IU4 210 aa18.44■□□□□ 0.54
ACTN4-210ENST00000588618 AGMATQ9BSE5 352 aa18.44■□□□□ 0.54
ACTN4-210ENST00000588618 NUDT15Q9NV35 164 aa18.44■□□□□ 0.54
ACTN4-210ENST00000588618 AMMECR1Q9Y4X0 333 aaPredicted RBP18.44■□□□□ 0.54
ACTN4-210ENST00000588618 ZFHX3Q15911 3703 aa18.44■□□□□ 0.54
ACTN4-210ENST00000588618 TRAV6A0A075B6T7 132 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 RNASEK-C17orf49H0YIS7 233 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 RAB29O14966 203 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 PI3P19957 117 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 LGALS4P56470 323 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 LINC00311Q8N616 119 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 ZDHHC22Q8N966 263 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 C20orf85Q9H1P6 137 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 IFI27L2Q9H2X8 130 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 NUBP2Q9Y5Y2 271 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 IGLV2-14P01704 120 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 UBE2E1P51965 193 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 HLA-DRB5Q30154 266 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 GPR157Q5UAW9 335 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 HCP5Q6MZN7 132 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 SPNS3Q6ZMD2 512 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 TMED4Q7Z7H5 227 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 C5orf30Q96GV9 206 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 CCL28Q9NRJ3 127 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 GPR132Q9UNW8 380 aa18.43■□□□□ 0.54
ACTN4-210ENST00000588618 TRAV40A0A0B4J280 105 aa18.42■□□□□ 0.54
ACTN4-210ENST00000588618 ZNF626Q68DY1 528 aa18.42■□□□□ 0.54
ACTN4-210ENST00000588618 ZNF486Q96H40 463 aaPredicted RBP18.42■□□□□ 0.54
ACTN4-210ENST00000588618 S1PR3Q99500 378 aa18.42■□□□□ 0.54
ACTN4-210ENST00000588618 C5orf66Q9H5L9 145 aa18.42■□□□□ 0.54
ACTN4-210ENST00000588618 A0A1W2PRD5 423 aa18.41■□□□□ 0.54
ACTN4-210ENST00000588618 A0A1W2PRF3 423 aa18.41■□□□□ 0.54
ACTN4-210ENST00000588618 A0A1W2PRM7 423 aa18.41■□□□□ 0.54
ACTN4-210ENST00000588618 GPR31O00270 319 aa18.41■□□□□ 0.54
ACTN4-210ENST00000588618 ARPC1BO15143 372 aaKnown RBP18.41■□□□□ 0.54
ACTN4-210ENST00000588618 IGLV1-47P01700 117 aa18.41■□□□□ 0.54
ACTN4-210ENST00000588618 GNRHRP30968 328 aa18.41■□□□□ 0.54
ACTN4-210ENST00000588618 ZNF818PQ6ZRF7 136 aa18.41■□□□□ 0.54
ACTN4-210ENST00000588618 AKR1E2Q96JD6 320 aa18.41■□□□□ 0.54
ACTN4-210ENST00000588618 RTBDNQ9BSG5 229 aaPredicted RBP18.41■□□□□ 0.54
ACTN4-210ENST00000588618 CTSDP07339 412 aaPredicted RBP18.4■□□□□ 0.54
ACTN4-210ENST00000588618 HTR1DP28221 377 aa18.4■□□□□ 0.54
ACTN4-210ENST00000588618 PHLDA2Q53GA4 152 aa18.4■□□□□ 0.54
ACTN4-210ENST00000588618 C1orf229Q6ZS94 237 aaPredicted RBP18.4■□□□□ 0.54
ACTN4-210ENST00000588618 MINDY2Q8NBR6 621 aa18.4■□□□□ 0.54
ACTN4-210ENST00000588618 ZBTB34Q8NCN2 500 aa18.4■□□□□ 0.54
ACTN4-210ENST00000588618 RSRP1Q9BUV0 290 aa18.4■□□□□ 0.54
ACTN4-210ENST00000588618 ANK3Q12955 4377 aaKnown RBP18.4■□□□□ 0.54
ACTN4-210ENST00000588618 SAA2-SAA4A0A096LPE2 208 aa18.4■□□□□ 0.54
ACTN4-210ENST00000588618 CENPVL3A0A0U1RRI6 287 aa18.4■□□□□ 0.54
ACTN4-210ENST00000588618 CD5LO43866 347 aa18.4■□□□□ 0.54
ACTN4-210ENST00000588618 SAA2P0DJI9 122 aaPredicted RBP18.4■□□□□ 0.54
ACTN4-210ENST00000588618 CEACAM3P40198 252 aa18.4■□□□□ 0.54
ACTN4-210ENST00000588618 RAB25P57735 213 aa18.4■□□□□ 0.54
ACTN4-210ENST00000588618 ODF3L1Q8IXM7 274 aa18.4■□□□□ 0.54
ACTN4-210ENST00000588618 DRAM1Q8N682 238 aa18.4■□□□□ 0.54
ACTN4-210ENST00000588618 CCDC71LQ8N9Z2 235 aa18.4■□□□□ 0.54
ACTN4-210ENST00000588618 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.4■□□□□ 0.54
ACTN4-210ENST00000588618 ADAD2Q8NCV1 583 aaKnown RBP18.4■□□□□ 0.54
ACTN4-210ENST00000588618 OR4P4Q8NGL7 312 aa18.4■□□□□ 0.54
ACTN4-210ENST00000588618 GPHA2Q96T91 129 aa18.4■□□□□ 0.54
ACTN4-210ENST00000588618 MARVELD1Q9BSK0 173 aa18.4■□□□□ 0.54
ACTN4-210ENST00000588618 SDHAF2Q9NX18 166 aa18.4■□□□□ 0.54
ACTN4-210ENST00000588618 ODF3BA8MYP8 253 aa18.39■□□□□ 0.53
ACTN4-210ENST00000588618 BUB1B-PAK6H3BSN5 160 aa18.39■□□□□ 0.53
ACTN4-210ENST00000588618 PROP1O75360 226 aa18.39■□□□□ 0.53
ACTN4-210ENST00000588618 H2AFB2P0C5Z0 115 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms