RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, human

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM4-210	ENST00000588507	TRPT1	Q86TN4	253 aa	Known RBP	4.65	□□□□□ -1.67
TPM4-210	ENST00000588507	PRSS35	Q8N3Z0	413 aa		4.65	□□□□□ -1.67
TPM4-210	ENST00000588507	LILRB2	Q8N423	598 aa		4.65	□□□□□ -1.67
TPM4-210	ENST00000588507	MZB1	Q8WU39	189 aa		4.65	□□□□□ -1.67
TPM4-210	ENST00000588507	UHRF2	Q96PU4	802 aa		4.65	□□□□□ -1.67
TPM4-210	ENST00000588507	NEU1	Q99519	415 aa		4.65	□□□□□ -1.67
TPM4-210	ENST00000588507	TEAD3	Q99594	435 aa		4.65	□□□□□ -1.67
TPM4-210	ENST00000588507	PHB2	Q99623	299 aa		4.65	□□□□□ -1.67
TPM4-210	ENST00000588507	FNDC11	Q9BVV2	318 aa		4.65	□□□□□ -1.67
TPM4-210	ENST00000588507	TM2D1	Q9BX74	207 aa		4.65	□□□□□ -1.67
TPM4-210	ENST00000588507	SEPSECS	Q9HD40	501 aa	Known RBP	4.65	□□□□□ -1.67
TPM4-210	ENST00000588507	ETV7	Q9Y603	341 aa		4.65	□□□□□ -1.67
TPM4-210	ENST00000588507		V9GYQ6	96 aa		4.65	□□□□□ -1.67
TPM4-210	ENST00000588507	UNC119B	A6NIH7	251 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507		A6NIN4	97 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	ACOD1	A6NK06	481 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	NPIPB6	E9PJ23	425 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	C15orf65	H3BRN8	121 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	IGLV3-1	P01715	115 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	IGHV3-23	P01764	117 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	APELA	P0DMC3	54 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	MAS1L	P35410	378 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	ALDH3B2	P48448	385 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	DEFB131A	P59861	70 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	SSBP2	P81877	361 aa	Predicted RBP	4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	CYP51A1	Q16850	503 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	PAN3	Q58A45	887 aa	Known RBP	4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	GLT8D1	Q68CQ7	371 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	OFCC1	Q8IZS5	231 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	ARHGAP24	Q8N264	748 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	PRR18	Q8N4B5	295 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	OR6N2	Q8NGY6	317 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	RNF141	Q8WVD5	230 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	PPP1R14B	Q96C90	147 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	SPDL1	Q96EA4	605 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	BORCS8	Q96FH0	119 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	ELAC2	Q9BQ52	826 aa	Known RBP	4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	CHAC1	Q9BUX1	264 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	IFT27	Q9BW83	186 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	TXLNGY	Q9BZA5	131 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	VCX	Q9H320	206 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	KAT8	Q9H7Z6	458 aa	Known RBP	4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	VAPA	Q9P0L0	249 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	GMPR2	Q9P2T1	348 aa	Known RBP	4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	GNG12	Q9UBI6	72 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	AASS	Q9UDR5	926 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	ING4	Q9UNL4	249 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	MRPS16	Q9Y3D3	137 aa	Known RBP	4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	CDH10	Q9Y6N8	788 aa		4.64	□□□□□ -1.67
TPM4-210	ENST00000588507	SMIM9	A6NGZ8	99 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507		F5H768	121 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	SNX3	O60493	162 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	E2F6	O75461	281 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	OR2J3	O76001	311 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	DFFB	O76075	338 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	SPDEF	O95238	335 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	GNB3	P16520	340 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	MC5R	P33032	325 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	YAP1	P46937	504 aa	Known RBP	4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	PAX5	Q02548	391 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	SLC35F1	Q5T1Q4	408 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	SHF	Q7M4L6	423 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	ZNF781	Q8N8C0	355 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	OR10V1	Q8NGI7	309 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	PLPPR1	Q8TBJ4	325 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	MRPS24	Q96EL2	167 aa	Known RBP	4.63	□□□□□ -1.67
TPM4-210	ENST00000588507		Q96M66	194 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	LINC01600	Q96MT4	127 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	TSNAX	Q99598	290 aa	Known RBP	4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	ENOPH1	Q9UHY7	261 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	RFNG	Q9Y644	331 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507		V9GYS6	101 aa		4.63	□□□□□ -1.67
TPM4-210	ENST00000588507	IGKV3-7	A0A075B6H7	116 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507		H0YJX3	145 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507		H7C2Y5	167 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	MPPED1	O15442	326 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	ORC5	O43913	435 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	APOL3	O95236	402 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	CRYGC	P07315	174 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	IDO1	P14902	403 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	ZNF3	P17036	446 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	HOXA5	P20719	270 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	BLVRA	P53004	296 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	SLC18A1	P54219	525 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	HTD2	P86397	168 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	ESRG	Q1W209	222 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	ZNF833P	Q6ZTB9	187 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	ERI1	Q8IV48	349 aa	Known RBP	4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	ODF3L1	Q8IXM7	274 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	SLC15A3	Q8IY34	581 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	MFSD4A	Q8N468	514 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	CIRBP-AS1	Q8TBR5	109 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	FANK1	Q8TC84	345 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	RBPMS	Q93062	196 aa	Known RBP	4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	DAZ1	Q9NQZ3	744 aa	Known RBP	4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	WASHC3	Q9Y3C0	194 aa		4.62	□□□□□ -1.67
TPM4-210	ENST00000588507	TRBV5-3	A0A0A0MS03	114 aa		4.61	□□□□□ -1.67
TPM4-210	ENST00000588507	TMEM269	A0A1B0GVZ9	245 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms