RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 NDUFA3O95167 84 aa11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 IGHV3-11P01762 117 aa11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 CT45A6P0DMU7 189 aa11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 CT45A5P0DMU8 189 aa11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 CT45A7P0DMV0 189 aa11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 LINC00205P59089 165 aa11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 RPS27AP62979 156 aaKnown RBP11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 RUNX1Q01196 453 aa11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 GABPB1Q06547 395 aaPredicted RBP11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 RCN1Q15293 331 aa11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 ACSM3Q53FZ2 586 aa11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 RBM48Q5RL73 367 aaKnown RBP11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 SBSPONQ8IVN8 264 aa11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 C8orf59Q8N0T1 100 aaPredicted RBP11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 NANOGP1Q8N7R0 232 aa11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 MINDY2Q8NBR6 621 aa11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 NPBQ8NG41 125 aa11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 CLCC1Q96S66 551 aa11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 TMEM59Q9BXS4 323 aa11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 CHMP1AQ9HD42 196 aaPredicted RBP11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 CNOT2Q9NZN8 540 aaKnown RBP11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 OR1A1Q9P1Q5 309 aa11.75□□□□□ -0.53
PRKCSH-204ENST00000587290 EBAG9O00559 213 aa11.74□□□□□ -0.53
PRKCSH-204ENST00000587290 RGS11O94810 467 aa11.74□□□□□ -0.53
PRKCSH-204ENST00000587290 EGR2P11161 476 aaPredicted RBP11.74□□□□□ -0.53
PRKCSH-204ENST00000587290 SPNP16150 400 aa11.74□□□□□ -0.53
PRKCSH-204ENST00000587290 CX3CL1P78423 397 aa11.74□□□□□ -0.53
PRKCSH-204ENST00000587290 PLGLAQ15195 96 aa11.74□□□□□ -0.53
PRKCSH-204ENST00000587290 ZNF554Q86TJ5 538 aa11.74□□□□□ -0.53
PRKCSH-204ENST00000587290 DRAXINQ8NBI3 349 aaPredicted RBP11.74□□□□□ -0.53
PRKCSH-204ENST00000587290 ARPC1AQ92747 370 aa11.74□□□□□ -0.53
PRKCSH-204ENST00000587290 ABRACLQ9P1F3 81 aa11.74□□□□□ -0.53
PRKCSH-204ENST00000587290 SMAD5-AS1Q9Y6J3 95 aa11.74□□□□□ -0.53
PRKCSH-204ENST00000587290 H0YJW9 148 aa11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 RRHO14718 337 aa11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 NAPSAO96009 420 aa11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 CD1AP06126 327 aa11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 MAPK3P27361 379 aaPredicted RBP11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 QRFPP83859 136 aa11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 PACRGLQ8N7B6 248 aa11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 FBLIM1Q8WUP2 373 aa11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 MS4A10Q96PG2 267 aa11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 CHCHD6Q9BRQ6 235 aa11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 TOLLIPQ9H0E2 274 aa11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 TPSG1Q9NRR2 321 aa11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 FKBP14Q9NWM8 211 aa11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 GAR1Q9NY12 217 aaKnown RBP11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 GHRLQ9UBU3 117 aa11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 STEAP1Q9UHE8 339 aa11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 SLC23A1Q9UHI7 598 aa11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 FOXA2Q9Y261 457 aaPredicted RBP11.73□□□□□ -0.53
PRKCSH-204ENST00000587290 SACSQ9NZJ4 4579 aa11.72□□□□□ -0.53
PRKCSH-204ENST00000587290 TENM2Q9NT68 2774 aa11.72□□□□□ -0.53
PRKCSH-204ENST00000587290 TRIM64CA6NLI5 447 aa11.72□□□□□ -0.53
PRKCSH-204ENST00000587290 H7C2Y5 167 aa11.72□□□□□ -0.53
PRKCSH-204ENST00000587290 SOCS1O15524 211 aa11.72□□□□□ -0.53
PRKCSH-204ENST00000587290 LGALS1P09382 135 aaKnown RBP11.72□□□□□ -0.53
PRKCSH-204ENST00000587290 P2RY14Q15391 338 aa11.72□□□□□ -0.53
PRKCSH-204ENST00000587290 LY6G6FQ5SQ64 297 aa11.72□□□□□ -0.53
PRKCSH-204ENST00000587290 C1orf100Q5SVJ3 147 aa11.72□□□□□ -0.53
PRKCSH-204ENST00000587290 ZNF880Q6PDB4 577 aa11.72□□□□□ -0.53
PRKCSH-204ENST00000587290 RCHY1Q96PM5 261 aa11.72□□□□□ -0.53
PRKCSH-204ENST00000587290 GFI1Q99684 422 aa11.72□□□□□ -0.53
PRKCSH-204ENST00000587290 TM2D1Q9BX74 207 aa11.72□□□□□ -0.53
PRKCSH-204ENST00000587290 PLCXD1Q9NUJ7 323 aa11.72□□□□□ -0.53
PRKCSH-204ENST00000587290 AK3Q9UIJ7 227 aa11.72□□□□□ -0.53
PRKCSH-204ENST00000587290 RNF150Q9ULK6 438 aa11.72□□□□□ -0.53
PRKCSH-204ENST00000587290 ERGIC3Q9Y282 383 aa11.72□□□□□ -0.53
PRKCSH-204ENST00000587290 TMEM14DPA8MWL7 114 aa11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 LINC01619G3V211 115 aa11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 RAB29O14966 203 aa11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 GSTP1P09211 210 aaKnown RBP11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 FRMD6-AS1P0C7T7 363 aa11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 UBBP0CG47 229 aa11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 INSL3P51460 131 aa11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 SRSF7Q16629 238 aaKnown RBP eCLIP11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 GLT8D1Q68CQ7 371 aa11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 CEACAM19Q7Z692 300 aa11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 ZNF429Q86V71 674 aa11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 TMEM203Q969S6 136 aa11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 AGMATQ9BSE5 352 aa11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 C11orf54Q9H0W9 315 aaPredicted RBP11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 LPAR5Q9H1C0 372 aa11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 PLEKHJ1Q9NW61 149 aa11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 PIPOXQ9P0Z9 390 aa11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 METTL1Q9UBP6 276 aaKnown RBP11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 LSM2Q9Y333 95 aaKnown RBP11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 NUBP2Q9Y5Y2 271 aa11.71□□□□□ -0.53
PRKCSH-204ENST00000587290 OR5H14A6NHG9 310 aa11.7□□□□□ -0.54
PRKCSH-204ENST00000587290 PTGES3LE9PB15 166 aa11.7□□□□□ -0.54
PRKCSH-204ENST00000587290 SLC22A1O15245 554 aa11.7□□□□□ -0.54
PRKCSH-204ENST00000587290 PROP1O75360 226 aa11.7□□□□□ -0.54
PRKCSH-204ENST00000587290 CA2P00918 260 aa11.7□□□□□ -0.54
PRKCSH-204ENST00000587290 IGKV1-16P04430 117 aa11.7□□□□□ -0.54
PRKCSH-204ENST00000587290 CDK1P06493 297 aa11.7□□□□□ -0.54
PRKCSH-204ENST00000587290 SCTP09683 121 aa11.7□□□□□ -0.54
PRKCSH-204ENST00000587290 GP9P14770 177 aa11.7□□□□□ -0.54
PRKCSH-204ENST00000587290 CRIP2P52943 208 aaPredicted RBP11.7□□□□□ -0.54
PRKCSH-204ENST00000587290 TPPP2P59282 170 aa11.7□□□□□ -0.54
PRKCSH-204ENST00000587290 HLA-DRB3P79483 266 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms