RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 PRRT1Q99946 306 aa13.09□□□□□ -0.31
ATG4D-205ENST00000586477 ABHD14AQ9BUJ0 271 aa13.09□□□□□ -0.31
ATG4D-205ENST00000586477 PSG11Q9UQ72 335 aa13.09□□□□□ -0.31
ATG4D-205ENST00000586477 TBL2Q9Y4P3 447 aaKnown RBP13.09□□□□□ -0.31
ATG4D-205ENST00000586477 RBM7Q9Y580 266 aaKnown RBP13.09□□□□□ -0.31
ATG4D-205ENST00000586477 MINOS1-NBL1R4GNA1 71 aa13.09□□□□□ -0.31
ATG4D-205ENST00000586477 TRRAPQ9Y4A5 3859 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 IGHV3-43A0A0B4J1X8 118 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 IGHV1-69DA0A0B4J2H0 117 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 IGKV1-6A0A0C4DH72 117 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 RNASEK-C17orf49H0YIS7 233 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 IGHV1-69P01742 117 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 PMP2P02689 132 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 CD3DP04234 171 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 ARG1P05089 322 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 FCER2P06734 321 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 IGHV3-43DP0DP04 118 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 PPP1CCP36873 323 aaKnown RBP13.08□□□□□ -0.32
ATG4D-205ENST00000586477 DHRS11Q6UWP2 260 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 BRD3OSQ6XYD6 125 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 SLC25A48Q6ZT89 311 aaKnown RBP13.08□□□□□ -0.32
ATG4D-205ENST00000586477 MMP28Q9H239 520 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 PIPOXQ9P0Z9 390 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 OR1A1Q9P1Q5 309 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 SCP2D1Q9UJQ7 156 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 OR2W1Q9Y3N9 320 aa13.08□□□□□ -0.32
ATG4D-205ENST00000586477 CENPVL3A0A0U1RRI6 287 aa13.07□□□□□ -0.32
ATG4D-205ENST00000586477 FAM172BPA6NC97 362 aa13.07□□□□□ -0.32
ATG4D-205ENST00000586477 LEUTXA8MZ59 168 aa13.07□□□□□ -0.32
ATG4D-205ENST00000586477 NPFFO15130 113 aa13.07□□□□□ -0.32
ATG4D-205ENST00000586477 TXNL1O43396 289 aa13.07□□□□□ -0.32
ATG4D-205ENST00000586477 IGLV1-47P01700 117 aa13.07□□□□□ -0.32
ATG4D-205ENST00000586477 HTR1DP28221 377 aa13.07□□□□□ -0.32
ATG4D-205ENST00000586477 FCGR2CP31995 323 aa13.07□□□□□ -0.32
ATG4D-205ENST00000586477 RFX2P48378 723 aa13.07□□□□□ -0.32
ATG4D-205ENST00000586477 GNG10P50151 68 aa13.07□□□□□ -0.32
ATG4D-205ENST00000586477 LUMP51884 338 aaPredicted RBP13.07□□□□□ -0.32
ATG4D-205ENST00000586477 KLF9Q13886 244 aaPredicted RBP13.07□□□□□ -0.32
ATG4D-205ENST00000586477 GNMTQ14749 295 aa13.07□□□□□ -0.32
ATG4D-205ENST00000586477 BAK1Q16611 211 aa13.07□□□□□ -0.32
ATG4D-205ENST00000586477 HLA-DRB5Q30154 266 aa13.07□□□□□ -0.32
ATG4D-205ENST00000586477 PLA1AQ53H76 456 aa13.07□□□□□ -0.32
ATG4D-205ENST00000586477 RUSC1-AS1Q66K80 236 aa13.07□□□□□ -0.32
ATG4D-205ENST00000586477 LPCAT3Q6P1A2 487 aa13.07□□□□□ -0.32
ATG4D-205ENST00000586477 SDHCQ99643 169 aaPredicted RBP13.07□□□□□ -0.32
ATG4D-205ENST00000586477 ZNF221Q9UK13 617 aa13.07□□□□□ -0.32
ATG4D-205ENST00000586477 ODF3BA8MYP8 253 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 OOSP1A8MZH6 123 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 RAB29O14966 203 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 LANCL1O43813 399 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 UPK1BO75841 260 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 TUSC2O75896 110 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 AMY2AP04746 511 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 S100GP29377 79 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 DEFA1P59665 94 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 DEFA3P59666 94 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 SLC9A3R2Q15599 337 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 MSMO1Q15800 293 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 DEFB112Q30KQ8 113 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 CCDC144NLQ6NUI1 221 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 FAM71F2Q6NXP2 309 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 C3orf56Q8N813 242 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.06□□□□□ -0.32
ATG4D-205ENST00000586477 ZNF439Q8NDP4 499 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 TAF15Q92804 592 aaKnown RBP eCLIP13.06□□□□□ -0.32
ATG4D-205ENST00000586477 S1PR3Q99500 378 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 ZNF2Q9BSG1 426 aaPredicted RBP13.06□□□□□ -0.32
ATG4D-205ENST00000586477 MS4A7Q9GZW8 240 aaPredicted RBP13.06□□□□□ -0.32
ATG4D-205ENST00000586477 PRDM13Q9H4Q3 707 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 PALMDQ9NP74 551 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 MCUBQ9NWR8 336 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 DPM3Q9P2X0 92 aa13.06□□□□□ -0.32
ATG4D-205ENST00000586477 PKD1L1Q8TDX9 2849 aa13.05□□□□□ -0.32
ATG4D-205ENST00000586477 M0QYG6 137 aa13.05□□□□□ -0.32
ATG4D-205ENST00000586477 PPYP01298 95 aa13.05□□□□□ -0.32
ATG4D-205ENST00000586477 NFYAP23511 347 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-205ENST00000586477 BAMBIQ13145 260 aa13.05□□□□□ -0.32
ATG4D-205ENST00000586477 KLRD1Q13241 179 aa13.05□□□□□ -0.32
ATG4D-205ENST00000586477 HCP5Q6MZN7 132 aa13.05□□□□□ -0.32
ATG4D-205ENST00000586477 C16orf87Q6PH81 154 aa13.05□□□□□ -0.32
ATG4D-205ENST00000586477 OR4C16Q8NGL9 310 aa13.05□□□□□ -0.32
ATG4D-205ENST00000586477 MALSU1Q96EH3 234 aa13.05□□□□□ -0.32
ATG4D-205ENST00000586477 SCGB3A2Q96PL1 93 aa13.05□□□□□ -0.32
ATG4D-205ENST00000586477 TINAGL1Q9GZM7 467 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-205ENST00000586477 C11orf54Q9H0W9 315 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-205ENST00000586477 ABCB10Q9NRK6 738 aa13.05□□□□□ -0.32
ATG4D-205ENST00000586477 SLC2A8Q9NY64 477 aa13.05□□□□□ -0.32
ATG4D-205ENST00000586477 GAB2Q9UQC2 676 aa13.05□□□□□ -0.32
ATG4D-205ENST00000586477 FAM96BQ9Y3D0 163 aa13.05□□□□□ -0.32
ATG4D-205ENST00000586477 BUB1B-PAK6H3BSN5 160 aa13.04□□□□□ -0.32
ATG4D-205ENST00000586477 GPR12P47775 334 aa13.04□□□□□ -0.32
ATG4D-205ENST00000586477 ZNF137PP52743 207 aa13.04□□□□□ -0.32
ATG4D-205ENST00000586477 SURF2Q15527 256 aaPredicted RBP13.04□□□□□ -0.32
ATG4D-205ENST00000586477 CT45A1Q5HYN5 189 aa13.04□□□□□ -0.32
ATG4D-205ENST00000586477 MZT2BQ6NZ67 158 aa13.04□□□□□ -0.32
ATG4D-205ENST00000586477 RBMS3Q6XE24 437 aaKnown RBP13.04□□□□□ -0.32
ATG4D-205ENST00000586477 LYG1Q8N1E2 194 aa13.04□□□□□ -0.32
ATG4D-205ENST00000586477 OR4P4Q8NGL7 312 aa13.04□□□□□ -0.32
ATG4D-205ENST00000586477 TERB2Q8NHR7 220 aa13.04□□□□□ -0.32
ATG4D-205ENST00000586477 CT45A3Q8NHU0 189 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms