RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 KCNS2Q9ULS6 477 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 PSG11Q9UQ72 335 aa11.5□□□□□ -0.57
UBBP4-202ENST00000584755 TENM4Q6N022 2769 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 AKAP6Q13023 2319 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 A0A087X0M5 115 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 A0A1B0GX30 115 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 SMLR1H3BR10 107 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 CCSO14618 274 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 TNFSF12O43508 249 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 ADAP1O75689 374 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 CDS2O95674 445 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 RBP4P02753 201 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 PDLIM4P50479 330 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 CT45A1Q5HYN5 189 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 C8orf31Q8N9H6 132 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 CT45A3Q8NHU0 189 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 LHFPL5Q8TAF8 219 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 IL22RA2Q969J5 263 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 ABHD14BQ96IU4 210 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 ABHD14AQ9BUJ0 271 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 BARX1Q9HBU1 254 aaPredicted RBP11.49□□□□□ -0.57
UBBP4-202ENST00000584755 SDHAF2Q9NX18 166 aa11.49□□□□□ -0.57
UBBP4-202ENST00000584755 MALRD1Q5VYJ5 2156 aa11.48□□□□□ -0.57
UBBP4-202ENST00000584755 RNF212BA8MTL3 300 aa11.48□□□□□ -0.57
UBBP4-202ENST00000584755 SLC31A2O15432 143 aa11.48□□□□□ -0.57
UBBP4-202ENST00000584755 PROP1O75360 226 aa11.48□□□□□ -0.57
UBBP4-202ENST00000584755 GSG1LQ6UXU4 331 aa11.48□□□□□ -0.57
UBBP4-202ENST00000584755 ZNF66Q6ZN08 573 aa11.48□□□□□ -0.57
UBBP4-202ENST00000584755 SLC25A48Q6ZT89 311 aaKnown RBP11.48□□□□□ -0.57
UBBP4-202ENST00000584755 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.48□□□□□ -0.57
UBBP4-202ENST00000584755 ZNF596Q8TC21 504 aa11.48□□□□□ -0.57
UBBP4-202ENST00000584755 RAB39BQ96DA2 213 aa11.48□□□□□ -0.57
UBBP4-202ENST00000584755 NMES1Q9C002 83 aa11.48□□□□□ -0.57
UBBP4-202ENST00000584755 FAM212BQ9NTI7 297 aaPredicted RBP11.48□□□□□ -0.57
UBBP4-202ENST00000584755 LIN7CQ9NUP9 197 aaKnown RBP11.48□□□□□ -0.57
UBBP4-202ENST00000584755 DOCK11Q5JSL3 2073 aa11.47□□□□□ -0.57
UBBP4-202ENST00000584755 PIGBOS1A0A0B4J2F0 54 aa11.47□□□□□ -0.57
UBBP4-202ENST00000584755 DUXBA0A1W2PPF3 345 aa11.47□□□□□ -0.57
UBBP4-202ENST00000584755 A0A1W2PPH5 198 aa11.47□□□□□ -0.57
UBBP4-202ENST00000584755 IGHV2-5P01817 119 aa11.47□□□□□ -0.57
UBBP4-202ENST00000584755 NFYBP25208 207 aa11.47□□□□□ -0.57
UBBP4-202ENST00000584755 GNB2P62879 340 aa11.47□□□□□ -0.57
UBBP4-202ENST00000584755 CYCSP99999 105 aaKnown RBP11.47□□□□□ -0.57
UBBP4-202ENST00000584755 IL15RAQ13261 267 aa11.47□□□□□ -0.57
UBBP4-202ENST00000584755 Q5BKY6 102 aa11.47□□□□□ -0.57
UBBP4-202ENST00000584755 GGNBP1Q5YKI7 109 aa11.47□□□□□ -0.57
UBBP4-202ENST00000584755 ODF3L1Q8IXM7 274 aa11.47□□□□□ -0.57
UBBP4-202ENST00000584755 SELENOHQ8IZQ5 122 aaKnown RBP11.47□□□□□ -0.57
UBBP4-202ENST00000584755 TCTEX1D1Q8N7M0 179 aa11.47□□□□□ -0.57
UBBP4-202ENST00000584755 OR11H4Q8NGC9 324 aa11.47□□□□□ -0.57
UBBP4-202ENST00000584755 HYLS1Q96M11 299 aa11.47□□□□□ -0.57
UBBP4-202ENST00000584755 HSD17B10Q99714 261 aaKnown RBP11.47□□□□□ -0.57
UBBP4-202ENST00000584755 SSBP3Q9BWW4 388 aaPredicted RBP11.47□□□□□ -0.57
UBBP4-202ENST00000584755 PPIAL4CA0A0B4J2A2 164 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 MPTX1A8MV57 137 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 KIAA1324LA8MWY0 1029 aaPredicted RBP11.46□□□□□ -0.57
UBBP4-202ENST00000584755 C22orf46C9J442 243 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 NDUFS8O00217 210 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 HOXB5P09067 269 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 PPIAL4GP0DN37 164 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 IGHV1-8P0DP01 117 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 DNASE1P24855 282 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 GPR12P47775 334 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 NKX2-5P52952 324 aaPredicted RBP11.46□□□□□ -0.57
UBBP4-202ENST00000584755 ERVFRD-1P60508 538 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 RPL30P62888 115 aaKnown RBP11.46□□□□□ -0.57
UBBP4-202ENST00000584755 ZNF585BQ52M93 769 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 LYZL2Q7Z4W2 148 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 LINC00311Q8N616 119 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 SLC35G3Q8N808 338 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 DRAXINQ8NBI3 349 aaPredicted RBP11.46□□□□□ -0.57
UBBP4-202ENST00000584755 OR51H1Q8NH63 302 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 RBPMSQ93062 196 aaKnown RBP11.46□□□□□ -0.57
UBBP4-202ENST00000584755 LEAP2Q969E1 77 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 OR10C1Q96KK4 312 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 C2orf50Q96LR7 162 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 PSMG3-AS1Q96PY0 264 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 ZNF251Q9BRH9 671 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 GSX2Q9BZM3 304 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 BPESC1Q9GZL8 116 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 METTL8Q9H825 291 aaKnown RBP11.46□□□□□ -0.57
UBBP4-202ENST00000584755 TMED3Q9Y3Q3 217 aa11.46□□□□□ -0.57
UBBP4-202ENST00000584755 C5orf51A6NDU8 294 aa11.45□□□□□ -0.58
UBBP4-202ENST00000584755 A8MXK9 166 aa11.45□□□□□ -0.58
UBBP4-202ENST00000584755 FAM25EA8MYX2 175 aa11.45□□□□□ -0.58
UBBP4-202ENST00000584755 VWC2LB2RUY7 222 aa11.45□□□□□ -0.58
UBBP4-202ENST00000584755 IFNA21P01568 189 aa11.45□□□□□ -0.58
UBBP4-202ENST00000584755 IGHV3-7P01780 117 aa11.45□□□□□ -0.58
UBBP4-202ENST00000584755 LIPFP07098 398 aa11.45□□□□□ -0.58
UBBP4-202ENST00000584755 COL8A1P27658 744 aa11.45□□□□□ -0.58
UBBP4-202ENST00000584755 SSTR2P30874 369 aa11.45□□□□□ -0.58
UBBP4-202ENST00000584755 DUTP33316 252 aaKnown RBP11.45□□□□□ -0.58
UBBP4-202ENST00000584755 ATP5J2P56134 94 aa11.45□□□□□ -0.58
UBBP4-202ENST00000584755 LMO4P61968 165 aa11.45□□□□□ -0.58
UBBP4-202ENST00000584755 CATR1Q13166 79 aa11.45□□□□□ -0.58
UBBP4-202ENST00000584755 ESCO2Q56NI9 601 aa11.45□□□□□ -0.58
UBBP4-202ENST00000584755 TMEM268Q5VZI3 342 aa11.45□□□□□ -0.58
UBBP4-202ENST00000584755 C10orf105Q8TEF2 133 aa11.45□□□□□ -0.58
UBBP4-202ENST00000584755 SEC22AQ96IW7 307 aa11.45□□□□□ -0.58
UBBP4-202ENST00000584755 PDCD10Q9BUL8 212 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms