RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 SLC35B1P78383 322 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 C9orf152Q5JTZ5 239 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 HES5Q5TA89 166 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 C22orf42Q6IC83 251 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 Q6ZS49 121 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 NR2C2APQ86WQ0 139 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 STPG2Q8N412 459 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 RNF152Q8N8N0 203 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 OR10R2Q8NGX6 335 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 IL1F10Q8WWZ1 152 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 RNF5Q99942 180 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 RASL11BQ9BPW5 248 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 CMSS1Q9BQ75 279 aaKnown RBP7.81□□□□□ -1.16
SKA2-208ENST00000583927 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.81□□□□□ -1.16
SKA2-208ENST00000583927 KCNK7Q9Y2U2 307 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 OR5H14A6NHG9 310 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 SH2D7A6NKC9 451 aaPredicted RBP7.8□□□□□ -1.16
SKA2-208ENST00000583927 TRDCB7Z8K6 153 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 MFNGO00587 321 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 TMEM127O75204 238 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 SCGNO76038 276 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 NDUFA3O95167 84 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 MC5RP33032 325 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 SOX6P35712 828 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 F2RL1P55085 397 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 PLA2G7Q13093 441 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 KIR2DS1Q14954 304 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 BEAN1Q3B7T3 259 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 HIST2H2BDQ6DRA6 164 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 TEX38Q6PEX7 206 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 C5orf24Q7Z6I8 188 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 NPBQ8NG41 125 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 OR4A4PQ8NGN8 299 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 PHF21AQ96BD5 680 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 RAB3CQ96E17 227 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 HDHD3Q9BSH5 251 aaPredicted RBP7.8□□□□□ -1.16
SKA2-208ENST00000583927 CABLES2Q9BTV7 478 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 MRPL20Q9BYC9 149 aaKnown RBP7.8□□□□□ -1.16
SKA2-208ENST00000583927 SSR3Q9UNL2 185 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 GAB2Q9UQC2 676 aa7.8□□□□□ -1.16
SKA2-208ENST00000583927 HSPA12AO43301 675 aa7.79□□□□□ -1.16
SKA2-208ENST00000583927 RBBP9O75884 186 aa7.79□□□□□ -1.16
SKA2-208ENST00000583927 HLA-DRB1P01911 266 aa7.79□□□□□ -1.16
SKA2-208ENST00000583927 FCGR3AP08637 254 aa7.79□□□□□ -1.16
SKA2-208ENST00000583927 SCTP09683 121 aa7.79□□□□□ -1.16
SKA2-208ENST00000583927 CD3GP09693 182 aa7.79□□□□□ -1.16
SKA2-208ENST00000583927 OR5H8P0DN80 308 aa7.79□□□□□ -1.16
SKA2-208ENST00000583927 HIST1H1DP16402 221 aaKnown RBP7.79□□□□□ -1.16
SKA2-208ENST00000583927 CEACAM6P40199 344 aa7.79□□□□□ -1.16
SKA2-208ENST00000583927 OR3A3P47888 321 aa7.79□□□□□ -1.16
SKA2-208ENST00000583927 ACTBP60709 375 aa7.79□□□□□ -1.16
SKA2-208ENST00000583927 RPL23AP62750 156 aaKnown RBP7.79□□□□□ -1.16
SKA2-208ENST00000583927 MRPS15P82914 257 aaKnown RBP7.79□□□□□ -1.16
SKA2-208ENST00000583927 CFHR3Q02985 330 aa7.79□□□□□ -1.16
SKA2-208ENST00000583927 MOGAT2Q3SYC2 334 aa7.79□□□□□ -1.16
SKA2-208ENST00000583927 C10orf99Q6UWK7 81 aa7.79□□□□□ -1.16
SKA2-208ENST00000583927 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.79□□□□□ -1.16
SKA2-208ENST00000583927 OR5AN1Q8NGI8 311 aa7.79□□□□□ -1.16
SKA2-208ENST00000583927 SETD6Q8TBK2 473 aa7.79□□□□□ -1.16
SKA2-208ENST00000583927 KCTD7Q96MP8 289 aa7.79□□□□□ -1.16
SKA2-208ENST00000583927 NOL4LQ96MY1 436 aaPredicted RBP7.79□□□□□ -1.16
SKA2-208ENST00000583927 C11orf54Q9H0W9 315 aaPredicted RBP7.79□□□□□ -1.16
SKA2-208ENST00000583927 COL7A1Q02388 2944 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 TRBV6-7A0A0A0MS04 114 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 IGKV1-6A0A0C4DH72 117 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 LINC01548A6NM66 108 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 G3V4G9 280 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 NBR2O15453 112 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 ST8SIA5O15466 376 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 FABP7O15540 132 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 DUS4LO95620 317 aaKnown RBP7.78□□□□□ -1.16
SKA2-208ENST00000583927 IGHG4P01861 327 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 ELANEP08246 267 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 CT45A6P0DMU7 189 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 CT45A5P0DMU8 189 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 CT45A7P0DMV0 189 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 PF4V1P10720 104 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 DTYMKP23919 212 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 CRIP2P52943 208 aaPredicted RBP7.78□□□□□ -1.16
SKA2-208ENST00000583927 FOXE3Q13461 319 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 MMDQ15546 238 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 PNLIPRP3Q17RR3 467 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 C5orf64Q2M2E5 130 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 REC114Q7Z4M0 266 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 ZNF329Q86UD4 541 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 HSPB9Q9BQS6 159 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 OR1A1Q9P1Q5 309 aa7.78□□□□□ -1.16
SKA2-208ENST00000583927 SORL1Q92673 2214 aa7.77□□□□□ -1.17
SKA2-208ENST00000583927 A0A0A6YYH2 397 aa7.77□□□□□ -1.17
SKA2-208ENST00000583927 A6NJ64 397 aa7.77□□□□□ -1.17
SKA2-208ENST00000583927 H0YJW9 148 aa7.77□□□□□ -1.17
SKA2-208ENST00000583927 PROP1O75360 226 aa7.77□□□□□ -1.17
SKA2-208ENST00000583927 GSTP1P09211 210 aaKnown RBP7.77□□□□□ -1.17
SKA2-208ENST00000583927 GNB3P16520 340 aa7.77□□□□□ -1.17
SKA2-208ENST00000583927 CD33P20138 364 aa7.77□□□□□ -1.17
SKA2-208ENST00000583927 SDC2P34741 201 aa7.77□□□□□ -1.17
SKA2-208ENST00000583927 CDX1P47902 265 aaPredicted RBP7.77□□□□□ -1.17
SKA2-208ENST00000583927 PITPNAQ00169 270 aa7.77□□□□□ -1.17
SKA2-208ENST00000583927 TAGLNQ01995 201 aaKnown RBP7.77□□□□□ -1.17
SKA2-208ENST00000583927 TIMM50Q3ZCQ8 353 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms