RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 PNRC1Q12796 327 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC8-211ENST00000582539 IGSF11Q5DX21 431 aa8.53□□□□□ -1.04
TRAPPC8-211ENST00000582539 PDPNQ86YL7 162 aa8.53□□□□□ -1.04
TRAPPC8-211ENST00000582539 SLC35D1Q9NTN3 355 aa8.53□□□□□ -1.04
TRAPPC8-211ENST00000582539 KIAA1456Q9P272 454 aa8.53□□□□□ -1.04
TRAPPC8-211ENST00000582539 A0A1W2PR80 420 aa8.52□□□□□ -1.04
TRAPPC8-211ENST00000582539 C12orf77C9JDV5 145 aa8.52□□□□□ -1.04
TRAPPC8-211ENST00000582539 CRYZL1O95825 349 aa8.52□□□□□ -1.04
TRAPPC8-211ENST00000582539 DLK1P80370 383 aa8.52□□□□□ -1.04
TRAPPC8-211ENST00000582539 ID3Q02535 119 aa8.52□□□□□ -1.04
TRAPPC8-211ENST00000582539 ZNF474Q6S9Z5 364 aaPredicted RBP8.52□□□□□ -1.04
TRAPPC8-211ENST00000582539 PCSK4Q6UW60 755 aa8.52□□□□□ -1.04
TRAPPC8-211ENST00000582539 LYZL2Q7Z4W2 148 aa8.52□□□□□ -1.04
TRAPPC8-211ENST00000582539 PUSL1Q8N0Z8 303 aaKnown RBP8.52□□□□□ -1.04
TRAPPC8-211ENST00000582539 OR4D5Q8NGN0 318 aa8.52□□□□□ -1.04
TRAPPC8-211ENST00000582539 TMEM171Q8WVE6 324 aa8.52□□□□□ -1.04
TRAPPC8-211ENST00000582539 SEC11CQ9BY50 192 aa8.52□□□□□ -1.04
TRAPPC8-211ENST00000582539 MSL2Q9HCI7 577 aa8.52□□□□□ -1.04
TRAPPC8-211ENST00000582539 TMEM106BQ9NUM4 274 aa8.52□□□□□ -1.04
TRAPPC8-211ENST00000582539 C1RLQ9NZP8 487 aa8.52□□□□□ -1.04
TRAPPC8-211ENST00000582539 FAM215AQ9Y5M1 114 aa8.52□□□□□ -1.04
TRAPPC8-211ENST00000582539 KIAA1549Q9HCM3 1950 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 A0A1B0GW64 132 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 NKX2-6A6NCS4 301 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 IFNA4P05014 189 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 USF1P22415 310 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 BPIFB3P59826 476 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 TMEM155Q4W5P6 130 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 DRAM1Q8N682 238 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 CBLN4Q9NTU7 201 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 SH3BGRL2Q9UJC5 107 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 SSUH2Q9Y2M2 353 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 IGHV1-69-2A0A0G2JMI3 117 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 RPL31P62899 125 aaKnown RBP8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 Q6ZRG5 221 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 OR5B3Q8NH48 314 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 FAM122AQ96E09 287 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 SMCO4Q9NRQ5 59 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 TRAV14DV4A0A0A6YYC5 116 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 F6UZH7 168 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 TDGF1P3P51864 188 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 TMEM252Q8N6L7 170 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 DTD1Q8TEA8 209 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 TMED6Q8WW62 240 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 RPUSD4Q96CM3 377 aaKnown RBP8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 GAR1Q9NY12 217 aaKnown RBP8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 AUP1Q9Y679 476 aa8.52□□□□□ -1.05
TRAPPC8-211ENST00000582539 A0A0G2JNJ9 132 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 NMBP08949 121 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 LGALS4P56470 323 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 UBE2KP61086 200 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 NCR3LG1Q68D85 454 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 ZNF818PQ6ZRF7 136 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 OR11H4Q8NGC9 324 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 OR1L8Q8NGR8 309 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 SNRNP40Q96DI7 357 aaKnown RBP8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 P2RX4Q99571 388 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 SSX3Q99909 188 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 SRSF8Q9BRL6 282 aaKnown RBP8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 JKAMPQ9P055 326 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 KAAG1Q9UBP8 84 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 Q9UFV3 132 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 PCNX2A6NKB5 2137 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 FBXO24O75426 580 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 DSCR9P59020 149 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 CD300CQ08708 224 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 C4orf17Q53FE4 359 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 LINC00311Q8N616 119 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 FAM213BQ8TBF2 198 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 C17orf50Q8WW18 174 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 PLPPR2Q96GM1 343 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 CISD1Q9NZ45 108 aaKnown RBP8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 ZNF257Q9Y2Q1 563 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 FGF16O43320 207 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 IGHV1-46P01743 117 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 AESQ08117 197 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 FOXF2Q12947 444 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 CLINT1Q14677 625 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 CR1LQ2VPA4 569 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 CHRDL1Q9BU40 450 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 MRPL37Q9BZE1 423 aaKnown RBP8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 RALYQ9UKM9 306 aaKnown RBP8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 WASHC3Q9Y3C0 194 aa8.51□□□□□ -1.05
TRAPPC8-211ENST00000582539 FAM90A27PA6NNH2 459 aa8.5□□□□□ -1.05
TRAPPC8-211ENST00000582539 LEUTXA8MZ59 168 aa8.5□□□□□ -1.05
TRAPPC8-211ENST00000582539 CELA3BP08861 270 aa8.5□□□□□ -1.05
TRAPPC8-211ENST00000582539 RPS2P15880 293 aaKnown RBP8.5□□□□□ -1.05
TRAPPC8-211ENST00000582539 SOHLH1Q5JUK2 328 aa8.5□□□□□ -1.05
TRAPPC8-211ENST00000582539 C20orf204Q6ZNR8 217 aa8.5□□□□□ -1.05
TRAPPC8-211ENST00000582539 STXBP6Q8NFX7 210 aa8.5□□□□□ -1.05
TRAPPC8-211ENST00000582539 OR1L4Q8NGR5 311 aa8.5□□□□□ -1.05
TRAPPC8-211ENST00000582539 PFDN5Q99471 154 aa8.5□□□□□ -1.05
TRAPPC8-211ENST00000582539 APOC3P02656 99 aa8.5□□□□□ -1.05
TRAPPC8-211ENST00000582539 FOXG1P55316 489 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC8-211ENST00000582539 SELENOTP62341 195 aa8.5□□□□□ -1.05
TRAPPC8-211ENST00000582539 SUPT4H1P63272 117 aaKnown RBP8.5□□□□□ -1.05
TRAPPC8-211ENST00000582539 TNFRSF9Q07011 255 aa8.5□□□□□ -1.05
TRAPPC8-211ENST00000582539 SP6Q3SY56 376 aa8.5□□□□□ -1.05
TRAPPC8-211ENST00000582539 TMEM41BQ5BJD5 291 aa8.5□□□□□ -1.05
TRAPPC8-211ENST00000582539 SLC7A5P1Q8MH63 180 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms