RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 FUNDC2Q9BWH2 189 aa10.54□□□□□ -0.72
NUP85-215ENST00000580879 WNT10AQ9GZT5 417 aa10.54□□□□□ -0.72
NUP85-215ENST00000580879 C11orf54Q9H0W9 315 aaPredicted RBP10.54□□□□□ -0.72
NUP85-215ENST00000580879 RNF150Q9ULK6 438 aa10.54□□□□□ -0.72
NUP85-215ENST00000580879 IGKV1D-8A0A087WSZ0 117 aa10.53□□□□□ -0.72
NUP85-215ENST00000580879 TMEM235A6NFC5 223 aa10.53□□□□□ -0.72
NUP85-215ENST00000580879 FBXO24O75426 580 aa10.53□□□□□ -0.72
NUP85-215ENST00000580879 MOSP00540 346 aa10.53□□□□□ -0.72
NUP85-215ENST00000580879 NCS1P62166 190 aa10.53□□□□□ -0.72
NUP85-215ENST00000580879 WIPF2Q8TF74 440 aaPredicted RBP10.53□□□□□ -0.72
NUP85-215ENST00000580879 NUDCD2Q8WVJ2 157 aa10.53□□□□□ -0.72
NUP85-215ENST00000580879 NABP2Q9BQ15 211 aa10.53□□□□□ -0.72
NUP85-215ENST00000580879 FGF16O43320 207 aa10.52□□□□□ -0.73
NUP85-215ENST00000580879 F2RL1P55085 397 aa10.52□□□□□ -0.73
NUP85-215ENST00000580879 VBP1P61758 197 aa10.52□□□□□ -0.73
NUP85-215ENST00000580879 KIR2DS1Q14954 304 aa10.52□□□□□ -0.73
NUP85-215ENST00000580879 HACD4Q5VWC8 232 aa10.52□□□□□ -0.73
NUP85-215ENST00000580879 C10orf99Q6UWK7 81 aa10.52□□□□□ -0.73
NUP85-215ENST00000580879 GLDNQ6ZMI3 551 aaPredicted RBP10.52□□□□□ -0.73
NUP85-215ENST00000580879 CENPVQ7Z7K6 275 aaPredicted RBP10.52□□□□□ -0.73
NUP85-215ENST00000580879 OR5AU1Q8NGC0 362 aa10.52□□□□□ -0.73
NUP85-215ENST00000580879 OR4A4PQ8NGN8 299 aa10.52□□□□□ -0.73
NUP85-215ENST00000580879 OR13F1Q8NGS4 319 aa10.52□□□□□ -0.73
NUP85-215ENST00000580879 FAM110DQ8TAY7 271 aaPredicted RBP10.52□□□□□ -0.73
NUP85-215ENST00000580879 RITA1Q96K30 269 aa10.52□□□□□ -0.73
NUP85-215ENST00000580879 ZNF251Q9BRH9 671 aa10.52□□□□□ -0.73
NUP85-215ENST00000580879 AGMATQ9BSE5 352 aa10.52□□□□□ -0.73
NUP85-215ENST00000580879 ST6GALNAC5Q9BVH7 336 aa10.52□□□□□ -0.73
NUP85-215ENST00000580879 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.52□□□□□ -0.73
NUP85-215ENST00000580879 PLSCR3Q9NRY6 295 aa10.52□□□□□ -0.73
NUP85-215ENST00000580879 RDH8Q9NYR8 311 aa10.52□□□□□ -0.73
NUP85-215ENST00000580879 LINC00527Q9UJ94 153 aa10.52□□□□□ -0.73
NUP85-215ENST00000580879 ETV7Q9Y603 341 aa10.52□□□□□ -0.73
NUP85-215ENST00000580879 TRAV18A0A075B6X5 111 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 LINC01548A6NM66 108 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 RAB29O14966 203 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 SCGNO76038 276 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 CSF1P09603 554 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 CNTFRP26992 372 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 SERPINB10P48595 397 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 GNG2P59768 71 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 ARL6IP1Q15041 203 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 C2orf68Q2NKX9 166 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 NSUN5P1Q3KNT7 163 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 ZNF260Q3ZCT1 412 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 Q8N9W7 124 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 EDARADDQ8WWZ3 215 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 PHF21AQ96BD5 680 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 NOL4LQ96MY1 436 aaPredicted RBP10.51□□□□□ -0.73
NUP85-215ENST00000580879 S1PR3Q99500 378 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 CITED2Q99967 270 aaPredicted RBP10.51□□□□□ -0.73
NUP85-215ENST00000580879 CABLES2Q9BTV7 478 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 NAA50Q9GZZ1 169 aaKnown RBP10.51□□□□□ -0.73
NUP85-215ENST00000580879 PIPOXQ9P0Z9 390 aa10.51□□□□□ -0.73
NUP85-215ENST00000580879 TET2Q6N021 2002 aaPredicted RBP10.51□□□□□ -0.73
NUP85-215ENST00000580879 TRBV6-7A0A0A0MS04 114 aa10.5□□□□□ -0.73
NUP85-215ENST00000580879 ITGB1BP1O14713 200 aa10.5□□□□□ -0.73
NUP85-215ENST00000580879 SSX5O60225 188 aa10.5□□□□□ -0.73
NUP85-215ENST00000580879 GSTP1P09211 210 aaKnown RBP10.5□□□□□ -0.73
NUP85-215ENST00000580879 CT45A6P0DMU7 189 aa10.5□□□□□ -0.73
NUP85-215ENST00000580879 CT45A5P0DMU8 189 aa10.5□□□□□ -0.73
NUP85-215ENST00000580879 CT45A7P0DMV0 189 aa10.5□□□□□ -0.73
NUP85-215ENST00000580879 DTYMKP23919 212 aa10.5□□□□□ -0.73
NUP85-215ENST00000580879 GPR12P47775 334 aa10.5□□□□□ -0.73
NUP85-215ENST00000580879 SCAND1P57086 179 aa10.5□□□□□ -0.73
NUP85-215ENST00000580879 LINC00205P59089 165 aa10.5□□□□□ -0.73
NUP85-215ENST00000580879 MMDQ15546 238 aa10.5□□□□□ -0.73
NUP85-215ENST00000580879 FAM131AQ6UXB0 335 aa10.5□□□□□ -0.73
NUP85-215ENST00000580879 DRAXINQ8NBI3 349 aaPredicted RBP10.5□□□□□ -0.73
NUP85-215ENST00000580879 OR10J5Q8NHC4 309 aa10.5□□□□□ -0.73
NUP85-215ENST00000580879 MRPS26Q9BYN8 205 aaKnown RBP10.5□□□□□ -0.73
NUP85-215ENST00000580879 ZNF221Q9UK13 617 aa10.5□□□□□ -0.73
NUP85-215ENST00000580879 SPATA2Q9UM82 520 aa10.5□□□□□ -0.73
NUP85-215ENST00000580879 A0A1W2PRX2 142 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 J3QRK9 145 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 PROP1O75360 226 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 FCER2P06734 321 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 OR8U9P0C7N5 309 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 PTHLHP12272 177 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 ACTBP60709 375 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 TCTEX1D4Q5JR98 221 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 FAM71F2Q6NXP2 309 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 SLC35E3Q7Z769 313 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 ZNF329Q86UD4 541 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 CROCCP3Q8IVE0 287 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 OR8U1Q8NH10 309 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 SLC25A46Q96AG3 418 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 RASL11BQ9BPW5 248 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 HSPB9Q9BQS6 159 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 GINS4Q9BRT9 223 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 ABCG5Q9H222 651 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 MMP27Q9H306 513 aa10.49□□□□□ -0.73
NUP85-215ENST00000580879 LIN7CQ9NUP9 197 aaKnown RBP10.49□□□□□ -0.73
NUP85-215ENST00000580879 PSMB11A5LHX3 300 aa10.48□□□□□ -0.73
NUP85-215ENST00000580879 ADARB2-AS1A8MUL3 147 aa10.48□□□□□ -0.73
NUP85-215ENST00000580879 H0YJW9 148 aa10.48□□□□□ -0.73
NUP85-215ENST00000580879 M0R1X1 148 aa10.48□□□□□ -0.73
NUP85-215ENST00000580879 IGHG2P01859 326 aa10.48□□□□□ -0.73
NUP85-215ENST00000580879 SRSF7Q16629 238 aaKnown RBP eCLIP10.48□□□□□ -0.73
NUP85-215ENST00000580879 PNLIPRP3Q17RR3 467 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms