RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 SSTR5P35346 364 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 CAV2P51636 162 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 ERVK-16P61578 105 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 HFEQ30201 348 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 ZNF787Q6DD87 383 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 UQCC3Q6UW78 93 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 SPAG16Q8N0X2 631 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 FGFRL1Q8N441 504 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 EIF4E3Q8N5X7 224 aaKnown RBP9.26□□□□□ -0.93
SKA2-204ENST00000578519 TPRX1Q8N7U7 411 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 UBALD1Q8TB05 177 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 CIB3Q96Q77 187 aaPredicted RBP9.26□□□□□ -0.93
SKA2-204ENST00000578519 CLCC1Q96S66 551 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 CCL13Q99616 98 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 RAB1BQ9H0U4 201 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.26□□□□□ -0.93
SKA2-204ENST00000578519 LYRM2Q9NU23 88 aaPredicted RBP9.26□□□□□ -0.93
SKA2-204ENST00000578519 GFOD1Q9NXC2 390 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 FBXL17Q9UF56 701 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 MYO15AQ9UKN7 3530 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 CEP250Q9BV73 2442 aa9.26□□□□□ -0.93
SKA2-204ENST00000578519 IGHV1-69-2A0A0G2JMI3 117 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 RAB19A4D1S5 217 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 MSGN1A6NI15 193 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 I3L521 148 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 RBFOX2O43251 390 aaKnown RBP eCLIP9.25□□□□□ -0.93
SKA2-204ENST00000578519 FGF16O43320 207 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 SYNGR2O43760 224 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 CHST1O43916 411 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 SSSCA1O60232 199 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 PITX3O75364 302 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 CLDN14O95500 239 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 HPRT1P00492 218 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 IFNA5P01569 189 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 IGLV2-14P01704 120 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 DAOP14920 347 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 EPHA1P21709 976 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 THBS3P49746 956 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 POLR2GP62487 172 aaKnown RBP eCLIP9.25□□□□□ -0.93
SKA2-204ENST00000578519 HBG1P69891 147 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 HBG2P69892 147 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 RPP30P78346 268 aaKnown RBP9.25□□□□□ -0.93
SKA2-204ENST00000578519 EWSR1Q01844 656 aaKnown RBP eCLIP9.25□□□□□ -0.93
SKA2-204ENST00000578519 TAGLNQ01995 201 aaKnown RBP9.25□□□□□ -0.93
SKA2-204ENST00000578519 AANATQ16613 207 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 ZNF672Q499Z4 452 aaPredicted RBP9.25□□□□□ -0.93
SKA2-204ENST00000578519 H2BFWTQ7Z2G1 175 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 MUC15Q8N387 334 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 KDF1Q8NAX2 398 aaPredicted RBP9.25□□□□□ -0.93
SKA2-204ENST00000578519 DMBX1Q8NFW5 382 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 OR1S2Q8NGQ3 325 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 LINC01560Q8TB33 94 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 CCL17Q92583 94 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 MARC2Q969Z3 335 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 GNPNAT1Q96EK6 184 aaPredicted RBP9.25□□□□□ -0.93
SKA2-204ENST00000578519 S1PR3Q99500 378 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 LINC00574Q9H8X3 128 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 SDHAF2Q9NX18 166 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 KAAG1Q9UBP8 84 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 SLC25A10Q9UBX3 287 aaPredicted RBP9.25□□□□□ -0.93
SKA2-204ENST00000578519 STRAPQ9Y3F4 350 aaKnown RBP9.25□□□□□ -0.93
SKA2-204ENST00000578519 WSB1Q9Y6I7 421 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 HEATR1Q9H583 2144 aaKnown RBP9.25□□□□□ -0.93
SKA2-204ENST00000578519 DMDP11532 3685 aa9.25□□□□□ -0.93
SKA2-204ENST00000578519 IGHV3-43A0A0B4J1X8 118 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 GPR37O15354 613 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 TMPRSS2O15393 492 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 CGB3P0DN86 165 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 CGB7P0DN87 165 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 IGHV3-43DP0DP04 118 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 PPOXP50336 477 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 ADORA2A-AS1P86434 159 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 LTC4SQ16873 150 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 MIDNQ504T8 468 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 ZNF585BQ52M93 769 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 RPL7L1Q6DKI1 246 aaKnown RBP9.24□□□□□ -0.93
SKA2-204ENST00000578519 TMEM252Q8N6L7 170 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 FAM122AQ96E09 287 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 SMIM8Q96KF7 97 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 ABHD14AQ9BUJ0 271 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 CACNG5Q9UF02 275 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 SPEGQ15772 3267 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 ZNF292O60281 2723 aa9.24□□□□□ -0.93
SKA2-204ENST00000578519 ZNF705EA8MWA4 302 aaPredicted RBP9.23□□□□□ -0.93
SKA2-204ENST00000578519 DEFB108AA8MXU0 73 aa9.23□□□□□ -0.93
SKA2-204ENST00000578519 ST8SIA5O15466 376 aa9.23□□□□□ -0.93
SKA2-204ENST00000578519 SULT1A2P50226 295 aa9.23□□□□□ -0.93
SKA2-204ENST00000578519 RPL31P62899 125 aaKnown RBP9.23□□□□□ -0.93
SKA2-204ENST00000578519 EIF4EBP1Q13541 118 aaPredicted RBP9.23□□□□□ -0.93
SKA2-204ENST00000578519 C4orf17Q53FE4 359 aa9.23□□□□□ -0.93
SKA2-204ENST00000578519 SPRNQ5BIV9 151 aa9.23□□□□□ -0.93
SKA2-204ENST00000578519 CXorf66Q5JRM2 361 aaPredicted RBP9.23□□□□□ -0.93
SKA2-204ENST00000578519 IL34Q6ZMJ4 242 aa9.23□□□□□ -0.93
SKA2-204ENST00000578519 DMRTC2Q8IXT2 367 aaPredicted RBP9.23□□□□□ -0.93
SKA2-204ENST00000578519 STPG2Q8N412 459 aa9.23□□□□□ -0.93
SKA2-204ENST00000578519 COMMD1Q8N668 190 aa9.23□□□□□ -0.93
SKA2-204ENST00000578519 OR4S2Q8NH73 311 aa9.23□□□□□ -0.93
SKA2-204ENST00000578519 SCGB1C1Q8TD33 95 aa9.23□□□□□ -0.93
SKA2-204ENST00000578519 TMED6Q8WW62 240 aa9.23□□□□□ -0.93
SKA2-204ENST00000578519 NEU4Q8WWR8 484 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms