RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 ZADH2Q8N4Q0 377 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 ZNF676Q8N7Q3 588 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 SLC26A10Q8NG04 563 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 OR8G5Q8NG78 346 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 OR13D1Q8NGV5 346 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 OR8U1Q8NH10 309 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 OR4K15Q8NH41 348 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 OR56B4Q8NH76 319 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 SKA2Q8WVK7 121 aaPredicted RBP3.21□□□□□ -1.9
NUP88-213ENST00000576862 RGP1Q92546 391 aaPredicted RBP3.21□□□□□ -1.9
NUP88-213ENST00000576862 MRPL48Q96GC5 212 aaKnown RBP3.21□□□□□ -1.9
NUP88-213ENST00000576862 DCUN1D1Q96GG9 259 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 OXGR1Q96P68 337 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 TBX15Q96SF7 602 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 C12orf57Q99622 126 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 GABRG3Q99928 467 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 ARV1Q9H2C2 271 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 RBKSQ9H477 322 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 NMNAT1Q9HAN9 279 aaPredicted RBP3.21□□□□□ -1.9
NUP88-213ENST00000576862 TPT1P8Q9HAU6 139 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 GSKIPQ9P0R6 139 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 PRO0628Q9UI54 55 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 VPREB3Q9UKI3 123 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 ANGPT4Q9Y264 503 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 BTRCQ9Y297 605 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 FIS1Q9Y3D6 152 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 DNAJC15Q9Y5T4 150 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 MYO16Q9Y6X6 1858 aa3.21□□□□□ -1.9
NUP88-213ENST00000576862 ARID1AO14497 2285 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 TRBV6-6A0A0A6YYG2 114 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 A0A0G2JMP0 313 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 CENPVL3A0A0U1RRI6 287 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 PRORSD1PA6NEY8 169 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 GFYI3L273 518 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 K7EQS6 105 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 GPR31O00270 319 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 GYG2O15488 501 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 HCRTR1O43613 425 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 S1PR2O95136 353 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 CLIC3O95833 236 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 APODP05090 189 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 MRPL3P09001 348 aaKnown RBP3.2□□□□□ -1.9
NUP88-213ENST00000576862 FBP1P09467 338 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 OR56A5P0C7T3 313 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 LINC00032P0C843 101 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 LIPCP11150 499 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 RAB5AP20339 215 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 S100GP29377 79 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 RPL12P30050 165 aaKnown RBP3.2□□□□□ -1.9
NUP88-213ENST00000576862 GLP1RP43220 463 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 RPS9P46781 194 aaKnown RBP3.2□□□□□ -1.9
NUP88-213ENST00000576862 RAB13P51153 203 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 CCR6P51684 374 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 TCL1AP56279 114 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 TCTAP57738 103 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 TAS2R41P59536 307 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 PAFAH1B2P68402 229 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 SKP2Q13309 424 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 OR1Q1Q15612 314 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 NSDHLQ15738 373 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 CST6Q15828 149 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 HLA-DRB5Q30154 266 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 ARHGAP11BQ3KRB8 267 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 LIN52Q52LA3 116 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 PAGE3Q5JUK9 113 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 CASC10Q5T4H9 136 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 OR52E8Q6IFG1 317 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 TNFAIP8L2Q6P589 184 aaPredicted RBP3.2□□□□□ -1.9
NUP88-213ENST00000576862 SCIMPQ6UWF3 145 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 LRRC28Q86X40 367 aaPredicted RBP3.2□□□□□ -1.9
NUP88-213ENST00000576862 FAM71E2Q8N5Q1 922 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 GATD1Q8NB37 220 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 OR2Z1Q8NG97 314 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 OR4M2Q8NGB6 313 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 OR4K17Q8NGC6 315 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 OR5B3Q8NH48 314 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 ZNF502Q8TBZ5 544 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 TWIST2Q8WVJ9 160 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 TCTEX1D2Q8WW35 142 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 TMEM234Q8WY98 164 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 OR8B4Q96RC9 309 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 ZNF382Q96SR6 550 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 FOXC2Q99958 501 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 RASL11BQ9BPW5 248 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 PECRQ9BY49 303 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 OR11A1Q9GZK7 315 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 POLR2J2Q9GZM3 115 aaKnown RBP3.2□□□□□ -1.9
NUP88-213ENST00000576862 POLR2J3Q9H1A7 115 aaKnown RBP3.2□□□□□ -1.9
NUP88-213ENST00000576862 CLMPQ9H6B4 373 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 ZNF442Q9H7R0 627 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 FAM206AQ9NX38 181 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 SPANXCQ9NY87 97 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 COMMD9Q9P000 198 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 UFC1Q9Y3C8 167 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 KLF12Q9Y4X4 402 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 LSM5Q9Y4Y9 91 aaKnown RBP3.2□□□□□ -1.9
NUP88-213ENST00000576862 PCYT1BQ9Y5K3 369 aaPredicted RBP3.2□□□□□ -1.9
NUP88-213ENST00000576862 WSB1Q9Y6I7 421 aa3.2□□□□□ -1.9
NUP88-213ENST00000576862 KIAA1671Q9BY89 1806 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 ALPK3Q96L96 1907 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms