RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 RBMX2Q9Y388 322 aaKnown RBP6.92□□□□□ -1.3
NUP88-211ENST00000575976 M0QYG6 137 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 TUSC2O75896 110 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 CD3DP04234 171 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 OR8U9P0C7N5 309 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 OR5H8P0DN80 308 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 IL3RAP26951 378 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 FCGR2CP31995 323 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 HRH1P35367 487 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 CEACAM3P40198 252 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 REG1BP48304 166 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 RAB7AP51149 207 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 ZNF137PP52743 207 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 TAS2R46P59540 309 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 ACTBP60709 375 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 ACTG1P63261 375 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 SSBP1Q04837 148 aaKnown RBP6.91□□□□□ -1.3
NUP88-211ENST00000575976 DYRK1AQ13627 763 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 LINC00299Q6ZSB3 139 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 OVCH2Q7RTZ1 564 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 LDLRAD3Q86YD5 345 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 OR8U1Q8NH10 309 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 ZNF418Q8TF45 676 aaPredicted RBP6.91□□□□□ -1.3
NUP88-211ENST00000575976 GIMAP1Q8WWP7 306 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 TOMM40LQ969M1 308 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 RPEQ96AT9 228 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 CREB3L1Q96BA8 519 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 ZNF251Q9BRH9 671 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 AGMATQ9BSE5 352 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 THAP7Q9BT49 309 aaPredicted RBP6.91□□□□□ -1.3
NUP88-211ENST00000575976 AKIP1Q9NQ31 210 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 PIPOXQ9P0Z9 390 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 OR2W1Q9Y3N9 320 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 RBM7Q9Y580 266 aaKnown RBP6.91□□□□□ -1.3
NUP88-211ENST00000575976 TLN2Q9Y4G6 2542 aa6.91□□□□□ -1.3
NUP88-211ENST00000575976 SONP18583 2426 aaKnown RBP6.9□□□□□ -1.3
NUP88-211ENST00000575976 SAA2-SAA4A0A096LPE2 208 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 IGKV1D-13A0A0B4J2D9 117 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 A0A1W2PPI3 338 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 ANKRD20A5PA0PJZ0 165 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 OOSP1A8MZH6 123 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 ZNF736B4DX44 427 aaPredicted RBP6.9□□□□□ -1.3
NUP88-211ENST00000575976 HSD17B6O14756 317 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 RAB29O14966 203 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 HOXA3O43365 443 aaPredicted RBP6.9□□□□□ -1.3
NUP88-211ENST00000575976 PROP1O75360 226 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 IGHV4-59P01825 116 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 CD74P04233 296 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 GAPDHP04406 335 aaKnown RBP6.9□□□□□ -1.3
NUP88-211ENST00000575976 SAA2P0DJI9 122 aaPredicted RBP6.9□□□□□ -1.3
NUP88-211ENST00000575976 IGKV1-13P0DP09 117 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 AADACP22760 399 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 IER3P46695 156 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 RAB13P51153 203 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 LUMP51884 338 aaPredicted RBP6.9□□□□□ -1.3
NUP88-211ENST00000575976 TAS2R19P59542 299 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 ZNF45Q02386 682 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 ZNF816Q0VGE8 651 aaPredicted RBP6.9□□□□□ -1.3
NUP88-211ENST00000575976 BAMBIQ13145 260 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 BAK1Q16611 211 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 ACTBL2Q562R1 376 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 RPL39P5Q59GN2 51 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 RNASE10Q5GAN6 216 aaKnown RBP6.9□□□□□ -1.3
NUP88-211ENST00000575976 VAX1Q5SQQ9 334 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 ZNF660Q6AZW8 331 aaPredicted RBP6.9□□□□□ -1.3
NUP88-211ENST00000575976 STEAP1BQ6NZ63 245 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 DHRS11Q6UWP2 260 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 RBMS3Q6XE24 437 aaKnown RBP6.9□□□□□ -1.3
NUP88-211ENST00000575976 ZNF833PQ6ZTB9 187 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 Q8N402 240 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 MFSD4AQ8N468 514 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 ZDHHC22Q8N966 263 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 OR4D10Q8NGI6 311 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 PIFOQ8TCI5 191 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 RTN4IP1Q8WWV3 396 aaPredicted RBP6.9□□□□□ -1.3
NUP88-211ENST00000575976 TRIM63Q969Q1 353 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 C5orf30Q96GV9 206 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 DUX5Q96PT3 197 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 SDHCQ99643 169 aaPredicted RBP6.9□□□□□ -1.3
NUP88-211ENST00000575976 SSX3Q99909 188 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 ZNF2Q9BSG1 426 aaPredicted RBP6.9□□□□□ -1.3
NUP88-211ENST00000575976 TINAGL1Q9GZM7 467 aaPredicted RBP6.9□□□□□ -1.3
NUP88-211ENST00000575976 ESM1Q9NQ30 184 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 TNFRSF19Q9NS68 423 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 ZNF221Q9UK13 617 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 GAB2Q9UQC2 676 aa6.9□□□□□ -1.3
NUP88-211ENST00000575976 IGHV3-72A0A0B4J1Y9 119 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 IGHV1-3A0A0C4DH29 117 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 VGLL3A8MV65 326 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 H3BUX3 64 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 TIMM23O14925 209 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 TCF21O43680 179 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 VENTXO95231 258 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 RAB3DO95716 219 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 PPYP01298 95 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 CSF1P09603 554 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 ZNF735P0CB33 412 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 CD24P25063 80 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 GPR12P47775 334 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 LINC00205P59089 165 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms