RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 RAMP3O60896 148 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 PTAFRP25105 342 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 GATA4P43694 442 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 PAX9P55771 341 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 EDDM3BP56851 147 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 FAM201AQ5SY85 155 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 BTNL3Q6UXE8 466 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 ODF3L1Q8IXM7 274 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 FGFRL1Q8N441 504 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 NUP37Q8NFH4 326 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 C5orf30Q96GV9 206 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 GCM1Q9NP62 436 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 PCNX1Q96RV3 2341 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 PTPRQQ9UMZ3 2332 aa11.72□□□□□ -0.53
VPS33B-208ENST00000574755 AGPAT2O15120 278 aa11.71□□□□□ -0.53
VPS33B-208ENST00000574755 PRH1P02810 166 aa11.71□□□□□ -0.53
VPS33B-208ENST00000574755 ADH4P08319 380 aa11.71□□□□□ -0.53
VPS33B-208ENST00000574755 DANCRP0C864 163 aa11.71□□□□□ -0.53
VPS33B-208ENST00000574755 GZMHP20718 246 aa11.71□□□□□ -0.53
VPS33B-208ENST00000574755 TNFSF4P23510 183 aa11.71□□□□□ -0.53
VPS33B-208ENST00000574755 DYNLT3P51808 116 aa11.71□□□□□ -0.53
VPS33B-208ENST00000574755 RPL23AP62750 156 aaKnown RBP11.71□□□□□ -0.53
VPS33B-208ENST00000574755 RPL30P62888 115 aaKnown RBP11.71□□□□□ -0.53
VPS33B-208ENST00000574755 HTD2P86397 168 aa11.71□□□□□ -0.53
VPS33B-208ENST00000574755 NHLH1Q02575 133 aa11.71□□□□□ -0.53
VPS33B-208ENST00000574755 ZNF616Q08AN1 781 aa11.71□□□□□ -0.53
VPS33B-208ENST00000574755 BTNL8Q6UX41 500 aa11.71□□□□□ -0.53
VPS33B-208ENST00000574755 RAB40CQ96S21 281 aa11.71□□□□□ -0.53
VPS33B-208ENST00000574755 PSG11Q9UQ72 335 aa11.71□□□□□ -0.53
VPS33B-208ENST00000574755 K7N7A8 449 aa11.71□□□□□ -0.54
VPS33B-208ENST00000574755 ST8SIA5O15466 376 aa11.71□□□□□ -0.54
VPS33B-208ENST00000574755 SYNGR2O43760 224 aa11.71□□□□□ -0.54
VPS33B-208ENST00000574755 CD80P33681 288 aa11.71□□□□□ -0.54
VPS33B-208ENST00000574755 CAMLGP49069 296 aa11.71□□□□□ -0.54
VPS33B-208ENST00000574755 TMPRSS3P57727 454 aa11.71□□□□□ -0.54
VPS33B-208ENST00000574755 ZNF816Q0VGE8 651 aaPredicted RBP11.71□□□□□ -0.54
VPS33B-208ENST00000574755 STX12Q86Y82 276 aa11.71□□□□□ -0.54
VPS33B-208ENST00000574755 TCTEX1D2Q8WW35 142 aa11.71□□□□□ -0.54
VPS33B-208ENST00000574755 SEBOXQ9HB31 216 aaPredicted RBP11.71□□□□□ -0.54
VPS33B-208ENST00000574755 RNF7Q9UBF6 113 aa11.71□□□□□ -0.54
VPS33B-208ENST00000574755 USF3Q68DE3 2245 aa11.71□□□□□ -0.54
VPS33B-208ENST00000574755 FHITP49789 147 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 RBPJQ06330 500 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 EIF4EBP1Q13541 118 aaPredicted RBP11.7□□□□□ -0.54
VPS33B-208ENST00000574755 ATRAIDQ6UW56 229 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 TMEM182Q6ZP80 229 aaPredicted RBP11.7□□□□□ -0.54
VPS33B-208ENST00000574755 SPAG16Q8N0X2 631 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 PLPPR2Q96GM1 343 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 TSNAXQ99598 290 aaKnown RBP11.7□□□□□ -0.54
VPS33B-208ENST00000574755 UQCC1Q9NVA1 299 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 JKAMPQ9P055 326 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 GNG12Q9UBI6 72 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 FAM96BQ9Y3D0 163 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 MMP24Q9Y5R2 645 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 WSB1Q9Y6I7 421 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 DSCAMO60469 2012 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 ADGRG4Q8IZF6 3080 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 F8W036 122 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 C1QL1O75973 258 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 ATG12O94817 140 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 CLDN1O95832 211 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 CYB5R3P00387 301 aaPredicted RBP11.7□□□□□ -0.54
VPS33B-208ENST00000574755 KRASP01116 189 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 MUC1P15941 1255 aaPredicted RBP11.7□□□□□ -0.54
VPS33B-208ENST00000574755 ADCYAP1P18509 176 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 RAB5CP51148 216 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 BSPH1Q075Z2 132 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 Q3ZCU0 254 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 EDARADDQ8WWZ3 215 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 CACFD1Q9UGQ2 172 aa11.7□□□□□ -0.54
VPS33B-208ENST00000574755 DPRXA6NFQ7 191 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 TXNL1O43396 289 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 TSPAN15O95858 294 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 IAPPP10997 89 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 ATP6V0CP27449 155 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 G6PCP35575 357 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 MSMO1Q15800 293 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 MIDNQ504T8 468 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 ZNF295-AS1Q8N0V1 137 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 LYPD6BQ8NI32 183 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 AGMATQ9BSE5 352 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 JPT1Q9UK76 154 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 SMG1Q96Q15 3661 aaKnown RBP11.69□□□□□ -0.54
VPS33B-208ENST00000574755 TLN1Q9Y490 2541 aaKnown RBP11.69□□□□□ -0.54
VPS33B-208ENST00000574755 RAI1Q7Z5J4 1906 aaPredicted RBP11.69□□□□□ -0.54
VPS33B-208ENST00000574755 C17orf98A8MV24 154 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 THBDP07204 575 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 SELLP14151 372 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 SULT1A1P50225 295 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 TMEM267Q0VDI3 215 aaPredicted RBP11.69□□□□□ -0.54
VPS33B-208ENST00000574755 ZNF561Q8N587 486 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 OR2G3Q8NGZ4 309 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 RND1Q92730 232 aa11.69□□□□□ -0.54
VPS33B-208ENST00000574755 STRAPQ9Y3F4 350 aaKnown RBP11.69□□□□□ -0.54
VPS33B-208ENST00000574755 DYSFO75923 2080 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 TOR1AO14656 332 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 S1PR2O95136 353 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 MORN2Q502X0 79 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 ZNF66Q6ZN08 573 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 DEFB108BQ8NET1 73 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms