RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 RSRP1Q9BUV0 290 aa19.66■□□□□ 0.74
ATPAF1-213ENST00000574428 C14orf166Q9Y224 244 aaKnown RBP19.66■□□□□ 0.74
ATPAF1-213ENST00000574428 CXCL3P19876 107 aa19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 DVL1P1P54792 670 aaPredicted RBP19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 PHLDA2Q53GA4 152 aa19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 ZNF626Q68DY1 528 aa19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 ZNF818PQ6ZRF7 136 aa19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 ZFAND1Q8TCF1 268 aa19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 ABHD14BQ96IU4 210 aa19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 AGMATQ9BSE5 352 aa19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 METTL8Q9H825 291 aaKnown RBP19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 GPN1Q9HCN4 374 aaPredicted RBP19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 PRRC2AP48634 2157 aaKnown RBP19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 B4DSR2 109 aa19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 CTSDP07339 412 aaPredicted RBP19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 OR52B4Q8NGK2 314 aa19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 CAPSLQ8WWF8 208 aa19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 C1orf159Q96HA4 380 aa19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 IFI27L2Q9H2X8 130 aa19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 INSIG2Q9Y5U4 225 aa19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 KPTNQ9Y664 436 aa19.65■□□□□ 0.74
ATPAF1-213ENST00000574428 A0A087X0M5 115 aa19.64■□□□□ 0.73
ATPAF1-213ENST00000574428 A0A1B0GX30 115 aa19.64■□□□□ 0.73
ATPAF1-213ENST00000574428 SNRPGP15A8MWD9 76 aa19.64■□□□□ 0.73
ATPAF1-213ENST00000574428 IGLV2-14P01704 120 aa19.64■□□□□ 0.73
ATPAF1-213ENST00000574428 AKR1C4P17516 323 aa19.64■□□□□ 0.73
ATPAF1-213ENST00000574428 COX7A1P24310 79 aa19.64■□□□□ 0.73
ATPAF1-213ENST00000574428 LY6G6FQ5SQ64 297 aa19.64■□□□□ 0.73
ATPAF1-213ENST00000574428 NOXA1Q86UR1 476 aa19.64■□□□□ 0.73
ATPAF1-213ENST00000574428 SIRPDQ9H106 197 aa19.64■□□□□ 0.73
ATPAF1-213ENST00000574428 CREBL2O60519 120 aaPredicted RBP19.63■□□□□ 0.73
ATPAF1-213ENST00000574428 ABCA11PQ4W5N1 156 aa19.63■□□□□ 0.73
ATPAF1-213ENST00000574428 LPCAT3Q6P1A2 487 aa19.63■□□□□ 0.73
ATPAF1-213ENST00000574428 C1orf122Q6ZSJ8 110 aa19.63■□□□□ 0.73
ATPAF1-213ENST00000574428 SLC25A48Q6ZT89 311 aaKnown RBP19.63■□□□□ 0.73
ATPAF1-213ENST00000574428 VMO1Q7Z5L0 202 aa19.63■□□□□ 0.73
ATPAF1-213ENST00000574428 ABHD12Q8N2K0 398 aa19.63■□□□□ 0.73
ATPAF1-213ENST00000574428 TMEM230Q96A57 120 aa19.63■□□□□ 0.73
ATPAF1-213ENST00000574428 GPHA2Q96T91 129 aa19.63■□□□□ 0.73
ATPAF1-213ENST00000574428 PCGF1Q9BSM1 259 aa19.63■□□□□ 0.73
ATPAF1-213ENST00000574428 SLC2A9Q9NRM0 540 aa19.63■□□□□ 0.73
ATPAF1-213ENST00000574428 IGHV2-26A0A0B4J1V2 119 aa19.62■□□□□ 0.73
ATPAF1-213ENST00000574428 ITGB1BP1O14713 200 aa19.62■□□□□ 0.73
ATPAF1-213ENST00000574428 PIGPP57054 158 aa19.62■□□□□ 0.73
ATPAF1-213ENST00000574428 SLC25A42Q86VD7 318 aa19.62■□□□□ 0.73
ATPAF1-213ENST00000574428 LINC01356Q8N9X3 169 aa19.62■□□□□ 0.73
ATPAF1-213ENST00000574428 C5orf30Q96GV9 206 aa19.62■□□□□ 0.73
ATPAF1-213ENST00000574428 ITGB1BP2Q9UKP3 347 aa19.62■□□□□ 0.73
ATPAF1-213ENST00000574428 CR1P17927 2039 aa19.62■□□□□ 0.73
ATPAF1-213ENST00000574428 SMLR1H3BR10 107 aa19.62■□□□□ 0.73
ATPAF1-213ENST00000574428 GPR31O00270 319 aa19.62■□□□□ 0.73
ATPAF1-213ENST00000574428 TNFSF12O43508 249 aa19.62■□□□□ 0.73
ATPAF1-213ENST00000574428 PRTN3P24158 256 aa19.62■□□□□ 0.73
ATPAF1-213ENST00000574428 RAB7AP51149 207 aa19.62■□□□□ 0.73
ATPAF1-213ENST00000574428 KLRD1Q13241 179 aa19.62■□□□□ 0.73
ATPAF1-213ENST00000574428 DRAM1Q8N682 238 aa19.62■□□□□ 0.73
ATPAF1-213ENST00000574428 ZNF645Q8N7E2 425 aa19.62■□□□□ 0.73
ATPAF1-213ENST00000574428 ALX4Q9H161 411 aaPredicted RBP19.62■□□□□ 0.73
ATPAF1-213ENST00000574428 J3QR06 171 aa19.61■□□□□ 0.73
ATPAF1-213ENST00000574428 TOX4O94842 621 aa19.61■□□□□ 0.73
ATPAF1-213ENST00000574428 C1QBP02746 253 aa19.61■□□□□ 0.73
ATPAF1-213ENST00000574428 ANXA3P12429 323 aa19.61■□□□□ 0.73
ATPAF1-213ENST00000574428 MMP9P14780 707 aa19.61■□□□□ 0.73
ATPAF1-213ENST00000574428 CD34P28906 385 aa19.61■□□□□ 0.73
ATPAF1-213ENST00000574428 GPR12P47775 334 aa19.61■□□□□ 0.73
ATPAF1-213ENST00000574428 TMEM249Q2WGJ8 235 aa19.61■□□□□ 0.73
ATPAF1-213ENST00000574428 LYG1Q8N1E2 194 aa19.61■□□□□ 0.73
ATPAF1-213ENST00000574428 PNKDQ8N490 385 aa19.61■□□□□ 0.73
ATPAF1-213ENST00000574428 OR9G1Q8NH87 305 aa19.61■□□□□ 0.73
ATPAF1-213ENST00000574428 MSI2Q96DH6 328 aaKnown RBP19.61■□□□□ 0.73
ATPAF1-213ENST00000574428 ZNF486Q96H40 463 aaPredicted RBP19.61■□□□□ 0.73
ATPAF1-213ENST00000574428 CLEC7AQ9BXN2 247 aa19.61■□□□□ 0.73
ATPAF1-213ENST00000574428 ITPR3Q14573 2671 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 IGHV4-31P0DP07 118 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 Q3ZCU0 254 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 C4orf46Q504U0 113 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 DCAF12L2Q5VW00 463 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 PDZD9Q8IXQ8 264 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 CIARTQ8N365 385 aaPredicted RBP19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 BVESQ8NE79 360 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 HIF1ANQ9NWT6 349 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 OR4E1P0C645 316 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 TAS2R31P59538 309 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 PAX8Q06710 450 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 PPP1R1AQ13522 171 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 ODF3L1Q8IXM7 274 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 CMTM1Q8IZ96 169 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 C8orf31Q8N9H6 132 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 FAM216AQ8WUB2 273 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 TNFRSF14Q92956 283 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 TBX15Q96SF7 602 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 UNKLQ9H9P5 680 aaKnown RBP19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 SDHAF2Q9NX18 166 aa19.6■□□□□ 0.73
ATPAF1-213ENST00000574428 BAHCC1Q9P281 2608 aa19.59■□□□□ 0.73
ATPAF1-213ENST00000574428 SAA2-SAA4A0A096LPE2 208 aa19.59■□□□□ 0.73
ATPAF1-213ENST00000574428 TRAV20A0A0B4J274 112 aa19.59■□□□□ 0.73
ATPAF1-213ENST00000574428 TOR1AO14656 332 aa19.59■□□□□ 0.73
ATPAF1-213ENST00000574428 SAA2P0DJI9 122 aaPredicted RBP19.59■□□□□ 0.73
ATPAF1-213ENST00000574428 RPL39P5Q59GN2 51 aa19.59■□□□□ 0.73
ATPAF1-213ENST00000574428 HCP5Q6MZN7 132 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms