RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 PLA2G3Q9NZ20 509 aa16.09■□□□□ 0.17
SCARF1-206ENST00000573852 AHCTF1Q8WYP5 2266 aa16.09■□□□□ 0.17
SCARF1-206ENST00000573852 WDFY4Q6ZS81 3184 aa16.09■□□□□ 0.17
SCARF1-206ENST00000573852 IGHV3-64DA0A0J9YX35 117 aa16.08■□□□□ 0.16
SCARF1-206ENST00000573852 CER1O95813 267 aa16.08■□□□□ 0.16
SCARF1-206ENST00000573852 TMEM14EPQ6UXP3 125 aa16.08■□□□□ 0.16
SCARF1-206ENST00000573852 HIST1H2BLQ99880 126 aa16.08■□□□□ 0.16
SCARF1-206ENST00000573852 C12orf49Q9H741 205 aa16.08■□□□□ 0.16
SCARF1-206ENST00000573852 CLDN1O95832 211 aa16.08■□□□□ 0.16
SCARF1-206ENST00000573852 IL18BPO95998 194 aa16.08■□□□□ 0.16
SCARF1-206ENST00000573852 TDGF1P13385 188 aa16.08■□□□□ 0.16
SCARF1-206ENST00000573852 ACSM6Q6P461 480 aa16.08■□□□□ 0.16
SCARF1-206ENST00000573852 TMEM251Q8N6I4 163 aa16.08■□□□□ 0.16
SCARF1-206ENST00000573852 SCCPDHQ8NBX0 429 aa16.08■□□□□ 0.16
SCARF1-206ENST00000573852 OR4X1Q8NH49 305 aa16.08■□□□□ 0.16
SCARF1-206ENST00000573852 NAT8Q9UHE5 227 aa16.08■□□□□ 0.16
SCARF1-206ENST00000573852 MEF2BQ02080 365 aaPredicted RBP16.07■□□□□ 0.16
SCARF1-206ENST00000573852 TNFRSF9Q07011 255 aa16.07■□□□□ 0.16
SCARF1-206ENST00000573852 ABHD17BQ5VST6 288 aa16.07■□□□□ 0.16
SCARF1-206ENST00000573852 C16orf82Q7Z2V1 217 aa16.07■□□□□ 0.16
SCARF1-206ENST00000573852 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.07■□□□□ 0.16
SCARF1-206ENST00000573852 OR10A7Q8NGE5 316 aa16.07■□□□□ 0.16
SCARF1-206ENST00000573852 S100PBPQ96BU1 408 aa16.07■□□□□ 0.16
SCARF1-206ENST00000573852 PACRGQ96M98 296 aaPredicted RBP16.07■□□□□ 0.16
SCARF1-206ENST00000573852 COL27A1Q8IZC6 1860 aaPredicted RBP16.07■□□□□ 0.16
SCARF1-206ENST00000573852 RAMP3O60896 148 aa16.07■□□□□ 0.16
SCARF1-206ENST00000573852 PDGFBP01127 241 aaPredicted RBP16.07■□□□□ 0.16
SCARF1-206ENST00000573852 PFN1P07737 140 aaKnown RBP16.07■□□□□ 0.16
SCARF1-206ENST00000573852 ERVK11-1P61568 191 aa16.07■□□□□ 0.16
SCARF1-206ENST00000573852 PMS2P11Q13670 270 aa16.07■□□□□ 0.16
SCARF1-206ENST00000573852 OR1C1Q15619 314 aa16.07■□□□□ 0.16
SCARF1-206ENST00000573852 PEAR1Q5VY43 1037 aaPredicted RBP16.07■□□□□ 0.16
SCARF1-206ENST00000573852 NCR3LG1Q68D85 454 aa16.07■□□□□ 0.16
SCARF1-206ENST00000573852 MDP1Q86V88 176 aa16.07■□□□□ 0.16
SCARF1-206ENST00000573852 SMOC1Q9H4F8 434 aa16.07■□□□□ 0.16
SCARF1-206ENST00000573852 GP6Q9HCN6 339 aa16.07■□□□□ 0.16
SCARF1-206ENST00000573852 MBNL3Q9NUK0 354 aaKnown RBP16.07■□□□□ 0.16
SCARF1-206ENST00000573852 TMEM241Q24JQ0 296 aa16.06■□□□□ 0.16
SCARF1-206ENST00000573852 CYP2G1PQ6ZSU1 146 aa16.06■□□□□ 0.16
SCARF1-206ENST00000573852 NECAP1Q8NC96 275 aa16.06■□□□□ 0.16
SCARF1-206ENST00000573852 RPUSD4Q96CM3 377 aaKnown RBP16.06■□□□□ 0.16
SCARF1-206ENST00000573852 C14orf144Q96I85 54 aa16.06■□□□□ 0.16
SCARF1-206ENST00000573852 AGMATQ9BSE5 352 aa16.06■□□□□ 0.16
SCARF1-206ENST00000573852 FAM53AQ6NSI3 398 aaPredicted RBP16.06■□□□□ 0.16
SCARF1-206ENST00000573852 GATAD1Q8WUU5 269 aa16.06■□□□□ 0.16
SCARF1-206ENST00000573852 RTL8AQ9BWD3 113 aa16.06■□□□□ 0.16
SCARF1-206ENST00000573852 SLC25A22Q9H936 323 aa16.06■□□□□ 0.16
SCARF1-206ENST00000573852 PITPNC1Q9UKF7 332 aa16.06■□□□□ 0.16
SCARF1-206ENST00000573852 GTF3C1Q12789 2109 aa16.06■□□□□ 0.16
SCARF1-206ENST00000573852 FAM90A26D6RGX4 464 aa16.05■□□□□ 0.16
SCARF1-206ENST00000573852 RNF224P0DH78 156 aa16.05■□□□□ 0.16
SCARF1-206ENST00000573852 MCEMP1Q8IX19 187 aa16.05■□□□□ 0.16
SCARF1-206ENST00000573852 SRD5A3Q9H8P0 318 aa16.05■□□□□ 0.16
SCARF1-206ENST00000573852 WIPI2Q9Y4P8 454 aa16.05■□□□□ 0.16
SCARF1-206ENST00000573852 TIMM9Q9Y5J7 89 aa16.05■□□□□ 0.16
SCARF1-206ENST00000573852 TRIOBPQ9H2D6 2365 aa16.05■□□□□ 0.16
SCARF1-206ENST00000573852 DOCK11Q5JSL3 2073 aa16.05■□□□□ 0.16
SCARF1-206ENST00000573852 KBTBD11O94819 623 aa16.05■□□□□ 0.16
SCARF1-206ENST00000573852 KRASP01116 189 aa16.05■□□□□ 0.16
SCARF1-206ENST00000573852 RPL23P62829 140 aaKnown RBP16.05■□□□□ 0.16
SCARF1-206ENST00000573852 DNLZQ5SXM8 178 aa16.05■□□□□ 0.16
SCARF1-206ENST00000573852 LINC00696Q6ZRV3 163 aa16.05■□□□□ 0.16
SCARF1-206ENST00000573852 CENPVQ7Z7K6 275 aaPredicted RBP16.05■□□□□ 0.16
SCARF1-206ENST00000573852 BCL2L2Q92843 193 aaPredicted RBP16.05■□□□□ 0.16
SCARF1-206ENST00000573852 USF3Q68DE3 2245 aa16.05■□□□□ 0.16
SCARF1-206ENST00000573852 CDIPTO14735 213 aa16.04■□□□□ 0.16
SCARF1-206ENST00000573852 GZMHP20718 246 aa16.04■□□□□ 0.16
SCARF1-206ENST00000573852 G6PCP35575 357 aa16.04■□□□□ 0.16
SCARF1-206ENST00000573852 CEBPDP49716 269 aaPredicted RBP16.04■□□□□ 0.16
SCARF1-206ENST00000573852 RPL30P62888 115 aaKnown RBP16.04■□□□□ 0.16
SCARF1-206ENST00000573852 BSXQ3C1V8 233 aa16.04■□□□□ 0.16
SCARF1-206ENST00000573852 C5orf30Q96GV9 206 aa16.04■□□□□ 0.16
SCARF1-206ENST00000573852 PYGO2Q9BRQ0 406 aa16.04■□□□□ 0.16
SCARF1-206ENST00000573852 PRO1933Q9H354 126 aa16.04■□□□□ 0.16
SCARF1-206ENST00000573852 CLN8Q9UBY8 286 aa16.04■□□□□ 0.16
SCARF1-206ENST00000573852 HSPB7Q9UBY9 170 aa16.04■□□□□ 0.16
SCARF1-206ENST00000573852 GAB2Q9UQC2 676 aa16.04■□□□□ 0.16
SCARF1-206ENST00000573852 IL2RGP31785 369 aa16.04■□□□□ 0.16
SCARF1-206ENST00000573852 PLGLB1Q02325 96 aa16.04■□□□□ 0.16
SCARF1-206ENST00000573852 COL10A1Q03692 680 aa16.04■□□□□ 0.16
SCARF1-206ENST00000573852 ALKBH6Q3KRA9 238 aa16.04■□□□□ 0.16
SCARF1-206ENST00000573852 UNQ6494/PRO21346Q6UXR6 183 aa16.04■□□□□ 0.16
SCARF1-206ENST00000573852 NXPH2O95156 264 aa16.03■□□□□ 0.16
SCARF1-206ENST00000573852 SELEP16581 610 aa16.03■□□□□ 0.16
SCARF1-206ENST00000573852 ZNF816Q0VGE8 651 aaPredicted RBP16.03■□□□□ 0.16
SCARF1-206ENST00000573852 OR1L1Q8NH94 360 aa16.03■□□□□ 0.16
SCARF1-206ENST00000573852 UFSP2Q9NUQ7 469 aa16.03■□□□□ 0.16
SCARF1-206ENST00000573852 MED13Q9UHV7 2174 aa16.03■□□□□ 0.16
SCARF1-206ENST00000573852 SMCO3A2RU48 225 aa16.03■□□□□ 0.16
SCARF1-206ENST00000573852 CELA3BP08861 270 aa16.03■□□□□ 0.16
SCARF1-206ENST00000573852 P0C879 139 aa16.03■□□□□ 0.16
SCARF1-206ENST00000573852 ERVS71-1P61550 626 aa16.03■□□□□ 0.16
SCARF1-206ENST00000573852 RPS16P62249 146 aaKnown RBP16.03■□□□□ 0.16
SCARF1-206ENST00000573852 RTP5Q14D33 572 aa16.03■□□□□ 0.16
SCARF1-206ENST00000573852 ZNF146Q15072 292 aa16.03■□□□□ 0.16
SCARF1-206ENST00000573852 TMEM183AQ8IXX5 376 aa16.03■□□□□ 0.16
SCARF1-206ENST00000573852 OR51G1Q8NGK1 321 aa16.03■□□□□ 0.16
SCARF1-206ENST00000573852 SPRY4Q9C004 299 aa16.03■□□□□ 0.16
SCARF1-206ENST00000573852 PARLQ9H300 379 aa16.03■□□□□ 0.16
SCARF1-206ENST00000573852 LAMP3Q9UQV4 416 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms