RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 PCSK5Q92824 1860 aa13.2□□□□□ -0.3
NUP88-207ENST00000573584 FAM90A26D6RGX4 464 aa13.2□□□□□ -0.3
NUP88-207ENST00000573584 TNFRSF9Q07011 255 aa13.2□□□□□ -0.3
NUP88-207ENST00000573584 PMS2P11Q13670 270 aa13.2□□□□□ -0.3
NUP88-207ENST00000573584 TMEM14EPQ6UXP3 125 aa13.2□□□□□ -0.3
NUP88-207ENST00000573584 CYP2G1PQ6ZSU1 146 aa13.2□□□□□ -0.3
NUP88-207ENST00000573584 C16orf82Q7Z2V1 217 aa13.2□□□□□ -0.3
NUP88-207ENST00000573584 NECAP1Q8NC96 275 aa13.2□□□□□ -0.3
NUP88-207ENST00000573584 RPUSD4Q96CM3 377 aaKnown RBP13.2□□□□□ -0.3
NUP88-207ENST00000573584 AGMATQ9BSE5 352 aa13.2□□□□□ -0.3
NUP88-207ENST00000573584 RTL8AQ9BWD3 113 aa13.2□□□□□ -0.3
NUP88-207ENST00000573584 SMCO3A2RU48 225 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 OR1C1Q15619 314 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 DNLZQ5SXM8 178 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 VASH2Q86V25 355 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 SCCPDHQ8NBX0 429 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 SRD5A3Q9H8P0 318 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 PLA2G3Q9NZ20 509 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 IGHV3-64DA0A0J9YX35 117 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 RNF212BA8MTL3 300 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 PSMB3P49720 205 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 CHD3Q12873 2000 aaKnown RBP13.19□□□□□ -0.3
NUP88-207ENST00000573584 BSXQ3C1V8 233 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 WDR86Q86TI4 376 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 TMEM251Q8N6I4 163 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 GAB2Q9UQC2 676 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 TIMM9Q9Y5J7 89 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 DOCK7Q96N67 2140 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 FAM186AA6NE01 2351 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 KBTBD11O94819 623 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 KRASP01116 189 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 PFN1P07737 140 aaKnown RBP13.19□□□□□ -0.3
NUP88-207ENST00000573584 ACSM6Q6P461 480 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 Q8IYB0 196 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 C14orf144Q96I85 54 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 SLC25A22Q9H936 323 aa13.19□□□□□ -0.3
NUP88-207ENST00000573584 MBNL3Q9NUK0 354 aaKnown RBP13.19□□□□□ -0.3
NUP88-207ENST00000573584 CDIPTO14735 213 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 RAMP3O60896 148 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 NXPH2O95156 264 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 IL18BPO95998 194 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 TUBG1P23258 451 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 PLGLB1Q02325 96 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 ESPL1Q14674 2120 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 MDP1Q86V88 176 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 POLDIP2Q9Y2S7 368 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 IL2RGP31785 369 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 G6PCP35575 357 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 ERVK11-1P61568 191 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 PKIAP61925 76 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 CENPVQ7Z7K6 275 aaPredicted RBP13.18□□□□□ -0.3
NUP88-207ENST00000573584 TMEM183AQ8IXX5 376 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 PRO1933Q9H354 126 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 UFSP2Q9NUQ7 469 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 HSPB7Q9UBY9 170 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 LAMP3Q9UQV4 416 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 WIPI2Q9Y4P8 454 aa13.18□□□□□ -0.3
NUP88-207ENST00000573584 SH2D1BO14796 132 aa13.17□□□□□ -0.3
NUP88-207ENST00000573584 RPL23P62829 140 aaKnown RBP13.17□□□□□ -0.3
NUP88-207ENST00000573584 LINC00696Q6ZRV3 163 aa13.17□□□□□ -0.3
NUP88-207ENST00000573584 GPR87Q9BY21 358 aa13.17□□□□□ -0.3
NUP88-207ENST00000573584 DNAJC13O75165 2243 aa13.17□□□□□ -0.3
NUP88-207ENST00000573584 TMEM250H0YL14 139 aa13.17□□□□□ -0.3
NUP88-207ENST00000573584 H7BYZ3 331 aa13.17□□□□□ -0.3
NUP88-207ENST00000573584 COL10A1Q03692 680 aa13.17□□□□□ -0.3
NUP88-207ENST00000573584 MSMO1Q15800 293 aa13.17□□□□□ -0.3
NUP88-207ENST00000573584 OR51G1Q8NGK1 321 aa13.17□□□□□ -0.3
NUP88-207ENST00000573584 OR10G9Q8NGN4 311 aa13.17□□□□□ -0.3
NUP88-207ENST00000573584 OR10G7Q8NGN6 311 aa13.17□□□□□ -0.3
NUP88-207ENST00000573584 OR5B12Q96R08 314 aa13.17□□□□□ -0.3
NUP88-207ENST00000573584 PYGO2Q9BRQ0 406 aa13.17□□□□□ -0.3
NUP88-207ENST00000573584 CLN8Q9UBY8 286 aa13.17□□□□□ -0.3
NUP88-207ENST00000573584 CTXND1A0A1B0GTU2 59 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 TSTD3H0UI37 97 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 GALR1P47211 349 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 ERVS71-1P61550 626 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 ZNF816Q0VGE8 651 aaPredicted RBP13.16□□□□□ -0.3
NUP88-207ENST00000573584 ZNF146Q15072 292 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 PEAR1Q5VY43 1037 aaPredicted RBP13.16□□□□□ -0.3
NUP88-207ENST00000573584 TMEM105Q8N8V8 129 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 OR4F5Q8NH21 305 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 GATAD1Q8WUU5 269 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 BCL2L2Q92843 193 aaPredicted RBP13.16□□□□□ -0.3
NUP88-207ENST00000573584 OR4F4Q96R69 305 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 PARLQ9H300 379 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 GP6Q9HCN6 339 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 PPP5D1E7EU14 171 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 DDTP30046 118 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 ATP6V1FQ16864 119 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 ZNF645Q8N7E2 425 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 NANOS1Q8WY41 292 aaKnown RBP13.16□□□□□ -0.3
NUP88-207ENST00000573584 TMEM147Q9BVK8 224 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 OR2D2Q9H210 308 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 KCNIP1Q9NZI2 227 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 ABI3Q9P2A4 366 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 LRRC30A6NM36 301 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 MBP02144 154 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 GZMHP20718 246 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 FGF7P21781 194 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 CLEC12BQ2HXU8 276 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms