RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 IGKV1-6A0A0C4DH72 117 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 RAB29O14966 203 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 LANCL1O43813 399 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 FAM106CPP0CH98 169 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 ARPC4P59998 168 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 LY6EQ16553 131 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 IGSF11Q5DX21 431 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 FAM71F2Q6NXP2 309 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 SHISA2Q6UWI4 295 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 HOGA1Q86XE5 327 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 TGIF2LXQ8IUE1 241 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 DTX3Q8N9I9 347 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 BEST4Q8NFU0 473 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 PIFOQ8TCI5 191 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 ST6GALNAC6Q969X2 333 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 DGCR14Q96DF8 476 aaKnown RBP10.88□□□□□ -0.67
RPAIN-213ENST00000573577 S1PR3Q99500 378 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 SLIRPQ9GZT3 109 aaKnown RBP10.88□□□□□ -0.67
RPAIN-213ENST00000573577 SCPEP1Q9HB40 452 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 RDH8Q9NYR8 311 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 RABL2AQ9UBK7 228 aaPredicted RBP10.88□□□□□ -0.67
RPAIN-213ENST00000573577 EXTL2Q9UBQ6 330 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 ANXA10Q9UJ72 324 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 RABL2BQ9UNT1 228 aa10.88□□□□□ -0.67
RPAIN-213ENST00000573577 IGKV1D-8A0A087WSZ0 117 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 IGHV1-3A0A0C4DH29 117 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 A0A1W2PPI3 338 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 CLPSL1A2RUU4 121 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 SULT1C2O00338 296 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 CTDSP2O14595 271 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 TIMM23O14925 209 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 ST8SIA5O15466 376 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 HLA-DQB1P01920 261 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 PTHLHP12272 177 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 RAB13P51153 203 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 Q6ZSV7 163 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 MOB3BQ86TA1 216 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 THNSL2Q86YJ6 484 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 SNX29P2Q8IUI4 249 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 LAX1Q8IWV1 398 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 DRAM1Q8N682 238 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 MCFD2Q8NI22 146 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 LINC01006Q8NI28 216 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 CAPSLQ8WWF8 208 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 RTN4IP1Q8WWV3 396 aaPredicted RBP10.87□□□□□ -0.67
RPAIN-213ENST00000573577 AKR1E2Q96JD6 320 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 DCUN1D5Q9BTE7 237 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 C11orf54Q9H0W9 315 aaPredicted RBP10.87□□□□□ -0.67
RPAIN-213ENST00000573577 IFI27L2Q9H2X8 130 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 ZNF221Q9UK13 617 aa10.87□□□□□ -0.67
RPAIN-213ENST00000573577 RBM7Q9Y580 266 aaKnown RBP10.87□□□□□ -0.67
RPAIN-213ENST00000573577 SAA2-SAA4A0A096LPE2 208 aa10.86□□□□□ -0.67
RPAIN-213ENST00000573577 A6NDX4 124 aa10.86□□□□□ -0.67
RPAIN-213ENST00000573577 TSPAN9O75954 239 aa10.86□□□□□ -0.67
RPAIN-213ENST00000573577 SAA2P0DJI9 122 aaPredicted RBP10.86□□□□□ -0.67
RPAIN-213ENST00000573577 REG1BP48304 166 aa10.86□□□□□ -0.67
RPAIN-213ENST00000573577 DIAPH2-AS1Q14236 149 aa10.86□□□□□ -0.67
RPAIN-213ENST00000573577 C16orf82Q7Z2V1 217 aa10.86□□□□□ -0.67
RPAIN-213ENST00000573577 GVQW1Q8N7I0 195 aa10.86□□□□□ -0.67
RPAIN-213ENST00000573577 OR56B4Q8NH76 319 aa10.86□□□□□ -0.67
RPAIN-213ENST00000573577 WFDC12Q8WWY7 111 aa10.86□□□□□ -0.67
RPAIN-213ENST00000573577 DIRAS2Q96HU8 199 aa10.86□□□□□ -0.67
RPAIN-213ENST00000573577 AGMATQ9BSE5 352 aa10.86□□□□□ -0.67
RPAIN-213ENST00000573577 NXF2Q9GZY0 626 aaKnown RBP10.86□□□□□ -0.67
RPAIN-213ENST00000573577 MMP27Q9H306 513 aa10.86□□□□□ -0.67
RPAIN-213ENST00000573577 C16orf95Q9H693 158 aa10.86□□□□□ -0.67
RPAIN-213ENST00000573577 NECAP2Q9NVZ3 263 aa10.86□□□□□ -0.67
RPAIN-213ENST00000573577 A3GALT2U3KPV4 340 aa10.86□□□□□ -0.67
RPAIN-213ENST00000573577 DPPA5A6NC42 116 aa10.85□□□□□ -0.67
RPAIN-213ENST00000573577 FAM90A9PA6NNJ1 464 aa10.85□□□□□ -0.67
RPAIN-213ENST00000573577 CHST1O43916 411 aa10.85□□□□□ -0.67
RPAIN-213ENST00000573577 CD1BP29016 333 aa10.85□□□□□ -0.67
RPAIN-213ENST00000573577 S100A5P33763 92 aa10.85□□□□□ -0.67
RPAIN-213ENST00000573577 GPR12P47775 334 aa10.85□□□□□ -0.67
RPAIN-213ENST00000573577 TAS2R46P59540 309 aa10.85□□□□□ -0.67
RPAIN-213ENST00000573577 MRPS10P82664 201 aaKnown RBP10.85□□□□□ -0.67
RPAIN-213ENST00000573577 HES1Q14469 280 aa10.85□□□□□ -0.67
RPAIN-213ENST00000573577 HABP2Q14520 560 aaPredicted RBP10.85□□□□□ -0.67
RPAIN-213ENST00000573577 C4orf48Q5BLP8 95 aa10.85□□□□□ -0.67
RPAIN-213ENST00000573577 ZNF833PQ6ZTB9 187 aa10.85□□□□□ -0.67
RPAIN-213ENST00000573577 ODF3L1Q8IXM7 274 aa10.85□□□□□ -0.67
RPAIN-213ENST00000573577 H1FOOQ8IZA3 346 aaPredicted RBP10.85□□□□□ -0.67
RPAIN-213ENST00000573577 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.85□□□□□ -0.67
RPAIN-213ENST00000573577 OR5AP2Q8NGF4 316 aa10.85□□□□□ -0.67
RPAIN-213ENST00000573577 GPX8Q8TED1 209 aa10.85□□□□□ -0.67
RPAIN-213ENST00000573577 NPFFR1Q9GZQ6 430 aa10.85□□□□□ -0.67
RPAIN-213ENST00000573577 PARP12Q9H0J9 701 aaKnown RBP10.85□□□□□ -0.67
RPAIN-213ENST00000573577 MIXL1Q9H2W2 232 aa10.85□□□□□ -0.67
RPAIN-213ENST00000573577 RNF114Q9Y508 228 aa10.85□□□□□ -0.67
RPAIN-213ENST00000573577 MEIS3P1A6NDR6 274 aa10.84□□□□□ -0.67
RPAIN-213ENST00000573577 M0QZK8 103 aa10.84□□□□□ -0.67
RPAIN-213ENST00000573577 OR2F2O95006 317 aa10.84□□□□□ -0.67
RPAIN-213ENST00000573577 SNRNP70P08621 437 aaKnown RBP10.84□□□□□ -0.67
RPAIN-213ENST00000573577 OR8U9P0C7N5 309 aa10.84□□□□□ -0.67
RPAIN-213ENST00000573577 NAT1P18440 290 aa10.84□□□□□ -0.67
RPAIN-213ENST00000573577 RCVRNP35243 200 aa10.84□□□□□ -0.67
RPAIN-213ENST00000573577 OR3A3P47888 321 aa10.84□□□□□ -0.67
RPAIN-213ENST00000573577 TMEM219Q86XT9 240 aa10.84□□□□□ -0.67
RPAIN-213ENST00000573577 OR4C13Q8NGP0 309 aa10.84□□□□□ -0.67
RPAIN-213ENST00000573577 OR8U1Q8NH10 309 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms