RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CMPK1P30085 196 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 OR10J1P30954 320 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 MP68P56378 58 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 TAS2R30P59541 319 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 NCS1P62166 190 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 COL10A1Q03692 680 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 MEF2CQ06413 473 aaPredicted RBP3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 ADIGQ0VDE8 80 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 FABP9Q0Z7S8 132 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 ERCC8Q13216 396 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 OR8G1Q15617 311 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 OCIAD2Q56VL3 154 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 MORN5Q5VZ52 161 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 PRSS54Q6PEW0 395 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF493Q6ZR52 646 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 SGPP2Q8IWX5 399 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 LINC00337Q8N6G1 96 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 TMEM252Q8N6L7 170 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 CSNK1G2-AS1Q8NCQ2 148 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 NUP35Q8NFH5 326 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 OR4E2Q8NGC2 313 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 VN1R17PQ8TDU5 208 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 DCAKDQ8WVC6 231 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 FXYD5Q96DB9 178 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 ADAT3Q96EY9 351 aaPredicted RBP3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 SIGLEC12Q96PQ1 595 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 POLR2J2Q9GZM3 115 aaKnown RBP3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 POLR2J3Q9H1A7 115 aaKnown RBP3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 PARP11Q9NR21 331 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 TMEM38BQ9NVV0 291 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 NOS1P29475 1434 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 IGKV1-8A0A0C4DH67 115 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 SMIM1B2RUZ4 78 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 M0R2Z0 102 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 PIRO00625 290 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 SLC37A4O43826 429 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF682O95780 498 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 SCTP09683 121 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 OR4Q2P0C623 313 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 IL1RNP18510 177 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 PPP1CCP36873 323 aaKnown RBP3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 THBS3P49746 956 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 LHX2P50458 406 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 MAXP61244 160 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 GRB2P62993 217 aaKnown RBP3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 CAV1Q03135 178 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 ABCA11PQ4W5N1 156 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 NXNL2Q5VZ03 156 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 GLYATQ6IB77 296 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 FBXW12Q6X9E4 464 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 IL34Q6ZMJ4 242 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 ACP7Q6ZNF0 438 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 Q6ZPA2 131 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF788Q6ZQV5 615 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 PRIMA1Q86XR5 153 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 TMEM229BQ8NBD8 167 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 OR13C8Q8NGS7 320 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF519Q8TB69 540 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 ISOC1Q96CN7 298 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 TP53RKQ96S44 253 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 ANAPC13Q9BS18 74 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF471Q9BX82 626 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 SLC25A2Q9BXI2 301 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 PARP12Q9H0J9 701 aaKnown RBP3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 ZBP1Q9H171 429 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF702PQ9H963 129 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 SLC23A2Q9UGH3 650 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 LAMTOR2Q9Y2Q5 125 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 ROBO3Q96MS0 1386 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 PLCH2O75038 1416 aa3.84□□□□□ -1.79
TOPBP1-210ENST00000572787 NALCNQ8IZF0 1738 aa3.84□□□□□ -1.8
TOPBP1-210ENST00000572787 KIAA1210Q9ULL0 1709 aa3.84□□□□□ -1.8
TOPBP1-210ENST00000572787 CKAP5Q14008 2032 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 TRBV19A0A075B6N1 114 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 DUXBA0A1W2PPF3 345 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 MPTX1A8MV57 137 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 TMEM250H0YL14 139 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 TRAF3IP2O43734 574 aaPredicted RBP3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 GNG7O60262 68 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 OR2H2O95918 312 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 IGLV2-14P01704 120 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 PSG2P11465 335 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 CTSEP14091 401 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 HOXA5P20719 270 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 PPIBP23284 216 aaKnown RBP3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 GATA2P23769 480 aaPredicted RBP3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 LMO2P25791 158 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 EVX1P49640 407 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 PROK1P58294 105 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 HERVK_113P61574 105 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 PPP3R1P63098 170 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 HIST1H1AQ02539 215 aaPredicted RBP3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 LOXL1Q08397 574 aaPredicted RBP3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 MMDQ15546 238 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 CCL15Q16663 113 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 LRRC10Q5BKY1 277 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 TCEAL5Q5H9L2 206 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 OR8I2Q8N0Y5 310 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 OR5W2Q8NH69 310 aa3.83□□□□□ -1.8
TOPBP1-210ENST00000572787 TWIST2Q8WVJ9 160 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms