RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 FGFRL1Q8N441 504 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 DRAM1Q8N682 238 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 MEGF10Q96KG7 1140 aa9.12□□□□□ -0.95
CCDC40-207ENST00000572253 SZT2Q5T011 3432 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 B4E171 279 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 SH2D1BO14796 132 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 RBMXL2O75526 392 aaKnown RBP9.11□□□□□ -0.95
CCDC40-207ENST00000572253 NXPH2O95156 264 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 HRASP01112 189 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 SPINK2P20155 84 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 TSPAN7P41732 249 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 FAM3BP58499 235 aaPredicted RBP9.11□□□□□ -0.95
CCDC40-207ENST00000572253 PLGLB1Q02325 96 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 JOSD1Q15040 202 aaPredicted RBP9.11□□□□□ -0.95
CCDC40-207ENST00000572253 ZNF585BQ52M93 769 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 SPINK14Q6IE38 97 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 ZBTB34Q8NCN2 500 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 OR2M7Q8NG81 312 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 OR10P1Q8NGE3 313 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 OR10G9Q8NGN4 311 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 OR10G7Q8NGN6 311 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 ACY3Q96HD9 319 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 THOC3Q96J01 351 aaKnown RBP9.11□□□□□ -0.95
CCDC40-207ENST00000572253 SS18L1O75177 396 aaPredicted RBP9.11□□□□□ -0.95
CCDC40-207ENST00000572253 CER1O95813 267 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 PFN1P07737 140 aaKnown RBP9.11□□□□□ -0.95
CCDC40-207ENST00000572253 HOXA6P31267 233 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 ERVS71-1P61550 626 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 COL10A1Q03692 680 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 ACOT6Q3I5F7 207 aaPredicted RBP9.11□□□□□ -0.95
CCDC40-207ENST00000572253 UBALD1Q8TB05 177 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 ZNF407Q9C0G0 2248 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 A0A1W2PPQ1 181 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 C17orf112F2Z3M2 114 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 LHX2P50458 406 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 FOXG1P55316 489 aaPredicted RBP9.11□□□□□ -0.95
CCDC40-207ENST00000572253 RPL23P62829 140 aaKnown RBP9.11□□□□□ -0.95
CCDC40-207ENST00000572253 HNF4GQ14541 408 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 Q6P435 159 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 TMEM14EPQ6UXP3 125 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 ZNF497Q6ZNH5 498 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 RPP25LQ8N5L8 163 aaKnown RBP9.11□□□□□ -0.95
CCDC40-207ENST00000572253 CT55Q8WUE5 264 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 NINJ1Q92982 152 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 NEIL1Q96FI4 390 aaPredicted RBP9.11□□□□□ -0.95
CCDC40-207ENST00000572253 BTF3L4Q96K17 158 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 LURAP1Q96LR2 239 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 CIB3Q96Q77 187 aaPredicted RBP9.11□□□□□ -0.95
CCDC40-207ENST00000572253 PRDM6Q9NQX0 595 aa9.11□□□□□ -0.95
CCDC40-207ENST00000572253 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.11□□□□□ -0.95
CCDC40-207ENST00000572253 TRIOBPQ9H2D6 2365 aa9.1□□□□□ -0.95
CCDC40-207ENST00000572253 ARGFXA6NJG6 315 aa9.1□□□□□ -0.95
CCDC40-207ENST00000572253 FAM166BA8MTA8 275 aa9.1□□□□□ -0.95
CCDC40-207ENST00000572253 RHBDL1O75783 438 aa9.1□□□□□ -0.95
CCDC40-207ENST00000572253 OR2H2O95918 312 aa9.1□□□□□ -0.95
CCDC40-207ENST00000572253 MRPL49Q13405 166 aaKnown RBP9.1□□□□□ -0.95
CCDC40-207ENST00000572253 FFAR4Q5NUL3 377 aa9.1□□□□□ -0.95
CCDC40-207ENST00000572253 NOL4LQ96MY1 436 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-207ENST00000572253 PYGO2Q9BRQ0 406 aa9.1□□□□□ -0.95
CCDC40-207ENST00000572253 PARLQ9H300 379 aa9.1□□□□□ -0.95
CCDC40-207ENST00000572253 HMGB3O15347 200 aaKnown RBP9.1□□□□□ -0.95
CCDC40-207ENST00000572253 CLDN18P56856 261 aa9.1□□□□□ -0.95
CCDC40-207ENST00000572253 LBHQ53QV2 105 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-207ENST00000572253 OR2T10Q8NGZ9 312 aa9.1□□□□□ -0.95
CCDC40-207ENST00000572253 RNASEH2CQ8TDP1 164 aaKnown RBP9.1□□□□□ -0.95
CCDC40-207ENST00000572253 ZNF703Q9H7S9 590 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-207ENST00000572253 ZNF705GA8MUZ8 300 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-207ENST00000572253 OR51G1Q8NGK1 321 aa9.1□□□□□ -0.95
CCDC40-207ENST00000572253 TMEM18Q96B42 140 aa9.1□□□□□ -0.95
CCDC40-207ENST00000572253 TNRC6AQ8NDV7 1962 aaKnown RBP9.09□□□□□ -0.95
CCDC40-207ENST00000572253 WDR87Q6ZQQ6 2873 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 ZNF503-AS2A6NEH8 195 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 KRASP01116 189 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 GCGP01275 180 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 AMBPP02760 352 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 SRP14P37108 136 aaKnown RBP9.09□□□□□ -0.95
CCDC40-207ENST00000572253 TBC1D28Q2M2D7 210 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 SPATA46Q5T0L3 261 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 LILRA1O75019 489 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 GYPAP02724 150 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 CENPVQ7Z7K6 275 aaPredicted RBP9.09□□□□□ -0.95
CCDC40-207ENST00000572253 PCGF1Q9BSM1 259 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 HSPB7Q9UBY9 170 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 A0A1B0GV90 55 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 TMEM30CPA0ZSE6 113 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 VENTXO95231 258 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 WNT5AP41221 380 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 ACSM6Q6P461 480 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 ZNF645Q8N7E2 425 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 GALMQ96C23 342 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 SPTBN2O15020 2390 aa9.09□□□□□ -0.95
CCDC40-207ENST00000572253 MKRN2OSH3BPM6 223 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 SLC31A2O15432 143 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 IGLV2-14P01704 120 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 COA6Q5JTJ3 125 aaKnown RBP9.08□□□□□ -0.96
CCDC40-207ENST00000572253 TMEM170AQ8WVE7 144 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 SPOCK3Q9BQ16 436 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 OR2D2Q9H210 308 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 FREM1Q5H8C1 2179 aa9.08□□□□□ -0.96
CCDC40-207ENST00000572253 A0A1W2PR80 420 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms