RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 AJUBAQ96IF1 538 aa10.71□□□□□ -0.69
CCDC40-205ENST00000571028 PARP12Q9H0J9 701 aaKnown RBP10.71□□□□□ -0.69
CCDC40-205ENST00000571028 MMP28Q9H239 520 aa10.71□□□□□ -0.69
CCDC40-205ENST00000571028 JPT1Q9UK76 154 aa10.71□□□□□ -0.69
CCDC40-205ENST00000571028 MINOS1-NBL1R4GNA1 71 aa10.71□□□□□ -0.69
CCDC40-205ENST00000571028 H3BUX3 64 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 ZNF701M0R085 212 aaPredicted RBP10.7□□□□□ -0.7
CCDC40-205ENST00000571028 ST8SIA5O15466 376 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 IGLV1-47P01700 117 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 HLA-DQB1P01920 261 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 ZBTB25P24278 435 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 CEACAM3P40198 252 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 ARPC4P59998 168 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 DIAPH2-AS1Q14236 149 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 HERPUD1Q15011 391 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 TMEM30BQ3MIR4 351 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 TPTE2P1Q5T6R2 138 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 STEAP3Q658P3 488 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 LDLRAD3Q86YD5 345 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 BEST4Q8NFU0 473 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 OR4A4PQ8NGN8 299 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 OR10J5Q8NHC4 309 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 MALSU1Q96EH3 234 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 SSX3Q99909 188 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 OCSTAMPQ9BR26 566 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 GINS4Q9BRT9 223 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 AURKAIP1Q9NWT8 199 aaPredicted RBP10.7□□□□□ -0.7
CCDC40-205ENST00000571028 RNF150Q9ULK6 438 aa10.7□□□□□ -0.7
CCDC40-205ENST00000571028 AMMECR1Q9Y4X0 333 aaPredicted RBP10.7□□□□□ -0.7
CCDC40-205ENST00000571028 YPEL1O60688 119 aa10.69□□□□□ -0.7
CCDC40-205ENST00000571028 CD24P25063 80 aa10.69□□□□□ -0.7
CCDC40-205ENST00000571028 IL3RAP26951 378 aa10.69□□□□□ -0.7
CCDC40-205ENST00000571028 IL18Q14116 193 aa10.69□□□□□ -0.7
CCDC40-205ENST00000571028 OXLD1Q5BKU9 147 aa10.69□□□□□ -0.7
CCDC40-205ENST00000571028 HOGA1Q86XE5 327 aa10.69□□□□□ -0.7
CCDC40-205ENST00000571028 OR2AK2Q8NG84 335 aa10.69□□□□□ -0.7
CCDC40-205ENST00000571028 YPEL2Q96QA6 119 aa10.69□□□□□ -0.7
CCDC40-205ENST00000571028 ABHD14AQ9BUJ0 271 aa10.69□□□□□ -0.7
CCDC40-205ENST00000571028 ABCB10Q9NRK6 738 aa10.69□□□□□ -0.7
CCDC40-205ENST00000571028 RDH8Q9NYR8 311 aa10.69□□□□□ -0.7
CCDC40-205ENST00000571028 RBM7Q9Y580 266 aaKnown RBP10.69□□□□□ -0.7
CCDC40-205ENST00000571028 TSPAN9O75954 239 aa10.68□□□□□ -0.7
CCDC40-205ENST00000571028 S100A5P33763 92 aa10.68□□□□□ -0.7
CCDC40-205ENST00000571028 CBX5P45973 191 aa10.68□□□□□ -0.7
CCDC40-205ENST00000571028 LRRC75BQ2VPJ9 315 aa10.68□□□□□ -0.7
CCDC40-205ENST00000571028 SLC25A48Q6ZT89 311 aaKnown RBP10.68□□□□□ -0.7
CCDC40-205ENST00000571028 MOB3BQ86TA1 216 aa10.68□□□□□ -0.7
CCDC40-205ENST00000571028 C11orf44Q8N8P7 122 aa10.68□□□□□ -0.7
CCDC40-205ENST00000571028 ZNF439Q8NDP4 499 aa10.68□□□□□ -0.7
CCDC40-205ENST00000571028 CREB3L1Q96BA8 519 aa10.68□□□□□ -0.7
CCDC40-205ENST00000571028 C11orf54Q9H0W9 315 aaPredicted RBP10.68□□□□□ -0.7
CCDC40-205ENST00000571028 MEGF9Q9H1U4 602 aa10.68□□□□□ -0.7
CCDC40-205ENST00000571028 ANXA10Q9UJ72 324 aa10.68□□□□□ -0.7
CCDC40-205ENST00000571028 VPREB3Q9UKI3 123 aa10.68□□□□□ -0.7
CCDC40-205ENST00000571028 IGHV3-72A0A0B4J1Y9 119 aa10.67□□□□□ -0.7
CCDC40-205ENST00000571028 LY6LH3BQJ8 138 aa10.67□□□□□ -0.7
CCDC40-205ENST00000571028 HSD17B6O14756 317 aa10.67□□□□□ -0.7
CCDC40-205ENST00000571028 PMP2P02689 132 aa10.67□□□□□ -0.7
CCDC40-205ENST00000571028 LPLP06858 475 aa10.67□□□□□ -0.7
CCDC40-205ENST00000571028 NFYAP23511 347 aaPredicted RBP10.67□□□□□ -0.7
CCDC40-205ENST00000571028 TNFSF8P32971 234 aa10.67□□□□□ -0.7
CCDC40-205ENST00000571028 OR3A3P47888 321 aa10.67□□□□□ -0.7
CCDC40-205ENST00000571028 SRSF7Q16629 238 aaKnown RBP eCLIP10.67□□□□□ -0.7
CCDC40-205ENST00000571028 C11orf87Q6NUJ2 197 aa10.67□□□□□ -0.7
CCDC40-205ENST00000571028 LINC00311Q8N616 119 aa10.67□□□□□ -0.7
CCDC40-205ENST00000571028 CAPSLQ8WWF8 208 aa10.67□□□□□ -0.7
CCDC40-205ENST00000571028 RBMXL1Q96E39 390 aaKnown RBP10.67□□□□□ -0.7
CCDC40-205ENST00000571028 ABHD14BQ96IU4 210 aa10.67□□□□□ -0.7
CCDC40-205ENST00000571028 ABHD1Q96SE0 405 aa10.67□□□□□ -0.7
CCDC40-205ENST00000571028 CABLES2Q9BTV7 478 aa10.67□□□□□ -0.7
CCDC40-205ENST00000571028 NXF2Q9GZY0 626 aaKnown RBP10.67□□□□□ -0.7
CCDC40-205ENST00000571028 TRBV6-7A0A0A0MS04 114 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 A6NHS1 94 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 GAPDHP04406 335 aaKnown RBP10.66□□□□□ -0.7
CCDC40-205ENST00000571028 OR8U9P0C7N5 309 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 HLA-DMAP28067 261 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 ARHGDIBP52566 201 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 Q3ZCU0 254 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 RPL39P5Q59GN2 51 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 C11orf88Q6PI97 169 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 FAM131AQ6UXB0 335 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 Q6ZS49 121 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 TMEM219Q86XT9 240 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 DRAM1Q8N682 238 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 C8orf31Q8N9H6 132 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 OR8U1Q8NH10 309 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 OR52I2Q8NH67 350 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 GPX8Q8TED1 209 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 SNAPC3Q92966 411 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 IFI27L2Q9H2X8 130 aa10.66□□□□□ -0.7
CCDC40-205ENST00000571028 TET2Q6N021 2002 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-205ENST00000571028 FABP12A6NFH5 140 aa10.65□□□□□ -0.7
CCDC40-205ENST00000571028 CTXN2P0C2S0 81 aa10.65□□□□□ -0.7
CCDC40-205ENST00000571028 BRS3P32247 399 aa10.65□□□□□ -0.7
CCDC40-205ENST00000571028 GPR12P47775 334 aa10.65□□□□□ -0.7
CCDC40-205ENST00000571028 RAB7AP51149 207 aa10.65□□□□□ -0.7
CCDC40-205ENST00000571028 DGCR2P98153 550 aa10.65□□□□□ -0.7
CCDC40-205ENST00000571028 HES1Q14469 280 aa10.65□□□□□ -0.7
CCDC40-205ENST00000571028 HNF4GQ14541 408 aa10.65□□□□□ -0.7
CCDC40-205ENST00000571028 PYHIN1Q6K0P9 492 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms