RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 AZU1P20160 251 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 HIST1H2BOP23527 126 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 HIST1H2BBP33778 126 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 ZNF138P52744 262 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 HIST1H2BDP58876 126 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 HIST1H2BCP62807 126 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 CCL7P80098 99 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 PITPNAQ00169 270 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 HIST2H2BEQ16778 126 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 TDRG1Q3Y452 100 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 PYDC2Q56P42 97 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 COA6Q5JTJ3 125 aaKnown RBP3.82□□□□□ -1.8
UBR1-208ENST00000569066 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.82□□□□□ -1.8
UBR1-208ENST00000569066 C1orf194Q5T5A4 169 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 TMEM205Q6UW68 189 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 LYPD2Q6UXB3 125 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 ALKAL1Q6UXT8 129 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 H2AFVQ71UI9 128 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 FAM24BQ8N5W8 94 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 OR11H1Q8NG94 326 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 OR51D1Q8NGF3 324 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 OR10X1Q8NGY0 326 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 OR10J6PQ8NGY7 276 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 OR11H2Q8NH07 326 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 RNASEH2CQ8TDP1 164 aaKnown RBP3.82□□□□□ -1.8
UBR1-208ENST00000569066 TFGQ92734 400 aaPredicted RBP3.82□□□□□ -1.8
UBR1-208ENST00000569066 HIST1H2BHQ93079 126 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 ELSPBP1Q96BH3 223 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 JSRP1Q96MG2 331 aaPredicted RBP3.82□□□□□ -1.8
UBR1-208ENST00000569066 HIST1H2BNQ99877 126 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 HIST1H2BMQ99879 126 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 TUBA4BQ9H853 241 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 TAS2R13Q9NYV9 303 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 VPS29Q9UBQ0 182 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 PSG8Q9UQ74 426 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 UBIAD1Q9Y5Z9 338 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 RIC1Q4ADV7 1423 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 A2ML1A8K2U0 1454 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 A0A0D9SG52 128 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 SPAARA0A1B0GVQ0 90 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 XKRYO14609 159 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 EIF4EP06730 217 aaKnown RBP3.82□□□□□ -1.8
UBR1-208ENST00000569066 OR10J4P0C629 311 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 TSPAN19P0C672 248 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 OR13C7P0DN81 318 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 MAGEA3P43357 314 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 ZNF136P52737 540 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 S100A10P60903 97 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 GINS1Q14691 196 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 SYPL2Q5VXT5 272 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 EPGNQ6UW88 154 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 OR51Q1Q8NH59 317 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 PIGXQ8TBF5 258 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 APH1AQ96BI3 265 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 GPR146Q96CH1 333 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 UFC1Q9Y3C8 167 aa3.82□□□□□ -1.8
UBR1-208ENST00000569066 TRPM2O94759 1503 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 LOXHD1Q8IVV2 1947 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 IGHV2OR16-5A0A0B4J2B6 119 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 UPK1AO00322 258 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 HLA-HP01893 362 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 LIPCP11150 499 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 CFHR2P36980 270 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 ZNF140P52738 457 aaPredicted RBP3.81□□□□□ -1.8
UBR1-208ENST00000569066 RPS20P60866 119 aaKnown RBP3.81□□□□□ -1.8
UBR1-208ENST00000569066 SMAGPQ0VAQ4 97 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 HTR4Q13639 388 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 SNRNP35Q16560 246 aaKnown RBP3.81□□□□□ -1.8
UBR1-208ENST00000569066 FER1L6Q2WGJ9 1857 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 PGGHGQ32M88 737 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 C2orf83Q53S99 150 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 TNS3Q68CZ2 1445 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 TMEM91Q6ZNR0 172 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 TMEM150AQ86TG1 271 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 SLC30A8Q8IWU4 369 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 CMTM8Q8IZV2 173 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 OR6V1Q8N148 313 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 C17orf78Q8N4C9 275 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 SLC35G3Q8N808 338 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 ATP6V1C2Q8NEY4 427 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 RNF133Q8WVZ7 376 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 CMBLQ96DG6 245 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 SLC35G5Q96KT7 338 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 PITX2Q99697 317 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 PLEKHA1Q9HB21 404 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 HRASLSQ9HDD0 168 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 UQCC1Q9NVA1 299 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 CACNA1SQ13698 1873 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 FRMPD1Q5SYB0 1578 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 TRAV30A0A087WSZ9 112 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 IGHV3-64DA0A0J9YX35 117 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 RCBTB2O95199 551 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 CTSDP07339 412 aaPredicted RBP3.81□□□□□ -1.8
UBR1-208ENST00000569066 DNAH10OSP0CZ25 163 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 GPX2P18283 190 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 MSR1P21757 451 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 S100GP29377 79 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 GABRA4P48169 554 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 CTBP2P56545 445 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 POU2AF1Q16633 256 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms