RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 RFX2P48378 723 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 HILS1P60008 231 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 ZNF816Q0VGE8 651 aaPredicted RBP13.51□□□□□ -0.25
COMMD4-224ENST00000568877 ZNF79Q15937 498 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 AANATQ16613 207 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 LRRC75BQ2VPJ9 315 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 PLA1AQ53H76 456 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 OVCH2Q7RTZ1 564 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 OR8U1Q8NH10 309 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 FAM216AQ8WUB2 273 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 SSMEM1Q8WWF3 244 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 ABHD14BQ96IU4 210 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 JMJD8Q96S16 334 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 SSX3Q99909 188 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 EHFQ9NZC4 300 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 RNF150Q9ULK6 438 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 OR2W1Q9Y3N9 320 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 ZFHX3Q15911 3703 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 SAA2-SAA4A0A096LPE2 208 aa13.5□□□□□ -0.25
COMMD4-224ENST00000568877 ZNF736B4DX44 427 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-224ENST00000568877 RAB29O14966 203 aa13.5□□□□□ -0.25
COMMD4-224ENST00000568877 TUSC2O75896 110 aa13.5□□□□□ -0.25
COMMD4-224ENST00000568877 IGHV4-59P01825 116 aa13.5□□□□□ -0.25
COMMD4-224ENST00000568877 SAA2P0DJI9 122 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-224ENST00000568877 REG1BP48304 166 aa13.5□□□□□ -0.25
COMMD4-224ENST00000568877 ARHGDIBP52566 201 aa13.5□□□□□ -0.25
COMMD4-224ENST00000568877 DYRK1AQ13627 763 aa13.5□□□□□ -0.25
COMMD4-224ENST00000568877 ACTBL2Q562R1 376 aa13.5□□□□□ -0.25
COMMD4-224ENST00000568877 OR8H3Q8N146 312 aa13.5□□□□□ -0.25
COMMD4-224ENST00000568877 Q8N402 240 aa13.5□□□□□ -0.25
COMMD4-224ENST00000568877 TMEM229BQ8NBD8 167 aa13.5□□□□□ -0.25
COMMD4-224ENST00000568877 GIMAP1Q8WWP7 306 aa13.5□□□□□ -0.25
COMMD4-224ENST00000568877 RTN4IP1Q8WWV3 396 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-224ENST00000568877 THAP7Q9BT49 309 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-224ENST00000568877 DPAGT1Q9H3H5 408 aa13.5□□□□□ -0.25
COMMD4-224ENST00000568877 ESM1Q9NQ30 184 aa13.5□□□□□ -0.25
COMMD4-224ENST00000568877 ABCB10Q9NRK6 738 aa13.5□□□□□ -0.25
COMMD4-224ENST00000568877 ZNF107Q9UII5 783 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-224ENST00000568877 ZNF221Q9UK13 617 aa13.5□□□□□ -0.25
COMMD4-224ENST00000568877 RBM7Q9Y580 266 aaKnown RBP13.5□□□□□ -0.25
COMMD4-224ENST00000568877 A0A1W2PPI3 338 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 H3BUX3 64 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 J3QRK9 145 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 TXNL1O43396 289 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 LANCL1O43813 399 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 CD3DP04234 171 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 AADACP22760 399 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 BRS3P32247 399 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 GPR12P47775 334 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 RAB13P51153 203 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 DYNLT3P51808 116 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 LUMP51884 338 aaPredicted RBP13.49□□□□□ -0.25
COMMD4-224ENST00000568877 TAS2R19P59542 299 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 ZNF45Q02386 682 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 SLC9A3R2Q15599 337 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 FAM71F2Q6NXP2 309 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 DHRS11Q6UWP2 260 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 ZNF833PQ6ZTB9 187 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 TGIF2LXQ8IUE1 241 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 TMEM86BQ8N661 226 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 ZDHHC22Q8N966 263 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 PIFOQ8TCI5 191 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 S1PR3Q99500 378 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 ZNF251Q9BRH9 671 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 SRRQ9GZT4 340 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 TAS2R8Q9NYW2 309 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 POMT1Q9Y6A1 747 aa13.49□□□□□ -0.25
COMMD4-224ENST00000568877 IGHV1-3A0A0C4DH29 117 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 BTBD17A6NE02 478 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 DNAJC9-AS1A6NH13 148 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 M0QYG6 137 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 VENTXO95231 258 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 PPYP01298 95 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 CSF1P09603 554 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 TBPP20226 339 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 RPL39P5Q59GN2 51 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 VAX1Q5SQQ9 334 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 ZNF660Q6AZW8 331 aaPredicted RBP13.48□□□□□ -0.25
COMMD4-224ENST00000568877 MOB3BQ86TA1 216 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 PRIMA1Q86XR5 153 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 OR5R1Q8NH85 324 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 DUX5Q96PT3 197 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 OR2D2Q9H210 308 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 TNFRSF19Q9NS68 423 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 GAB2Q9UQC2 676 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 NF1P21359 2839 aa13.48□□□□□ -0.25
COMMD4-224ENST00000568877 IGKV1D-13A0A0B4J2D9 117 aa13.47□□□□□ -0.25
COMMD4-224ENST00000568877 CLDN34H7C241 214 aa13.47□□□□□ -0.25
COMMD4-224ENST00000568877 TIMM23O14925 209 aa13.47□□□□□ -0.25
COMMD4-224ENST00000568877 CD74P04233 296 aa13.47□□□□□ -0.25
COMMD4-224ENST00000568877 IGKV1-13P0DP09 117 aa13.47□□□□□ -0.25
COMMD4-224ENST00000568877 TSPAN5P62079 268 aa13.47□□□□□ -0.25
COMMD4-224ENST00000568877 RNASE10Q5GAN6 216 aaKnown RBP13.47□□□□□ -0.25
COMMD4-224ENST00000568877 STEAP1BQ6NZ63 245 aa13.47□□□□□ -0.25
COMMD4-224ENST00000568877 MFSD4AQ8N468 514 aa13.47□□□□□ -0.25
COMMD4-224ENST00000568877 DRAM1Q8N682 238 aa13.47□□□□□ -0.25
COMMD4-224ENST00000568877 GDPD1Q8N9F7 314 aa13.47□□□□□ -0.25
COMMD4-224ENST00000568877 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.47□□□□□ -0.25
COMMD4-224ENST00000568877 OR6F1Q8NGZ6 308 aa13.47□□□□□ -0.25
COMMD4-224ENST00000568877 CFHR4Q92496 578 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms