RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 KLHDC1Q8N7A1 406 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 ZCCHC14Q8WYQ9 949 aaKnown RBP9.36□□□□□ -0.91
PALB2-206ENST00000568219 WDR61Q9GZS3 305 aaKnown RBP9.36□□□□□ -0.91
PALB2-206ENST00000568219 OR2W1Q9Y3N9 320 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 LRRK1Q38SD2 2015 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 RRP8O43159 456 aaKnown RBP9.36□□□□□ -0.91
PALB2-206ENST00000568219 IL3RAP26951 378 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 OTX1P32242 354 aaPredicted RBP9.36□□□□□ -0.91
PALB2-206ENST00000568219 TIGITQ495A1 244 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 RPS19BP1Q86WX3 136 aaKnown RBP9.36□□□□□ -0.91
PALB2-206ENST00000568219 RASL10BQ96S79 203 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 OR1A1Q9P1Q5 309 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 AKAP6Q13023 2319 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 HTTP42858 3142 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 RPL36A-HNRNPH2H7BZ11 118 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 PLA2G5P39877 138 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 TDGF1P3P51864 188 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 WIPI1Q5MNZ9 446 aaPredicted RBP9.35□□□□□ -0.91
PALB2-206ENST00000568219 RNASEKQ6P5S7 137 aaKnown RBP9.35□□□□□ -0.91
PALB2-206ENST00000568219 BEND2Q8NDZ0 799 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 P2RX4Q99571 388 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 GABRG3Q99928 467 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 TM2D1Q9BX74 207 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 MRPL13Q9BYD1 178 aaKnown RBP9.35□□□□□ -0.91
PALB2-206ENST00000568219 MRPL18Q9H0U6 180 aaKnown RBP9.35□□□□□ -0.91
PALB2-206ENST00000568219 SPTA1P02549 2419 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 IGKV1-12A0A0C4DH73 117 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 RNF212BA8MTL3 300 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 IGKV1D-12P01611 117 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 IGHV4-34P06331 123 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 FABP6P51161 128 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 SSR4P51571 173 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 TCTAP57738 103 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 OR8I2Q8N0Y5 310 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 FAM19A2Q8N3H0 131 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 TMEM170AQ8WVE7 144 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 WNK2Q9Y3S1 2297 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 SERF1AO75920 110 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 NAPSAO96009 420 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 GZMHP20718 246 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 OR2D2Q9H210 308 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 CLDN16Q9Y5I7 305 aa9.35□□□□□ -0.91
PALB2-206ENST00000568219 IGHV1OR21-1A0A087WYE8 117 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 CEACAM18A8MTB9 384 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 SYNGR1O43759 233 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 IGHMP01871 453 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 CFPP27918 469 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 ATP5G3P48201 142 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 FXYD3Q14802 87 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 FGFRL1Q8N441 504 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 TCTEX1D1Q8N7M0 179 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 LYPD6BQ8NI32 183 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 TMEM147Q9BVK8 224 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 HIPK2Q9H2X6 1198 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.34□□□□□ -0.91
PALB2-206ENST00000568219 MMP17Q9ULZ9 603 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 PCNX3Q9H6A9 2034 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 PSG4Q00888 419 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 ID3Q02535 119 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 PRR31Q5SQ13 230 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 LEMD1Q68G75 181 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 VWCEQ96DN2 955 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 WIPI2Q9Y4P8 454 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 DNAH14Q0VDD8 3507 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 IGFBP7Q16270 282 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 GCNT2Q8N0V5 402 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 RPP25LQ8N5L8 163 aaKnown RBP9.34□□□□□ -0.91
PALB2-206ENST00000568219 ST6GALNAC6Q969X2 333 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 PARD6GQ9BYG4 376 aaPredicted RBP9.34□□□□□ -0.91
PALB2-206ENST00000568219 TMEM106BQ9NUM4 274 aa9.34□□□□□ -0.91
PALB2-206ENST00000568219 TECRQ9NZ01 308 aaKnown RBP9.34□□□□□ -0.91
PALB2-206ENST00000568219 PRRC2CQ9Y520 2896 aaKnown RBP9.33□□□□□ -0.92
PALB2-206ENST00000568219 COL4A6Q14031 1691 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 VCANP13611 3396 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 IGKV1-27A0A075B6S5 117 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 CARFQ8N187 725 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 TPRX1Q8N7U7 411 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 MIEN1Q9BRT3 115 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 DERL1Q9BUN8 251 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 POLR3KQ9Y2Y1 108 aaPredicted RBP9.33□□□□□ -0.92
PALB2-206ENST00000568219 GTF3C1Q12789 2109 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 A0A0J9YW62 118 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 RAB29O14966 203 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 GALR2O43603 387 aaPredicted RBP9.33□□□□□ -0.92
PALB2-206ENST00000568219 CLPSP04118 112 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 GCSAMLQ5JQS6 135 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 C1orf194Q5T5A4 169 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 OR2M3Q8NG83 312 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 ABHD3Q8WU67 409 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 WASHC3Q9Y3C0 194 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 NCOA6Q14686 2063 aaPredicted RBP9.33□□□□□ -0.92
PALB2-206ENST00000568219 LILRA5A6NI73 299 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 MKRN2OSH3BPM6 223 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 ZG16O60844 167 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 CCL3P10147 92 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 ZNF525Q8N782 197 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 NEU1Q99519 415 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 USF3Q68DE3 2245 aa9.33□□□□□ -0.92
PALB2-206ENST00000568219 PTPRZ1P23471 2315 aaPredicted RBP9.33□□□□□ -0.92
PALB2-206ENST00000568219 A0A0G2JRQ6 117 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms