RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 GHITMQ9H3K2 345 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 KCNK15Q9H427 330 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 CHMP1AQ9HD42 196 aaPredicted RBP3.77□□□□□ -1.81
CLK3-219ENST00000567805 ACOT13Q9NPJ3 140 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 PLEKHJ1Q9NW61 149 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 PIPOXQ9P0Z9 390 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 STEAP1Q9UHE8 339 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 PFDN2Q9UHV9 154 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 AK3Q9UIJ7 227 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 LINC00527Q9UJ94 153 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 ZNF580Q9UK33 172 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 HSF4Q9ULV5 492 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 RAB26Q9ULW5 256 aa3.77□□□□□ -1.81
CLK3-219ENST00000567805 AK6Q9Y3D8 172 aaKnown RBP3.77□□□□□ -1.81
CLK3-219ENST00000567805 ERICH4A6NGS2 130 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 LINC01548A6NM66 108 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 FOXI3A8MTJ6 420 aaPredicted RBP3.76□□□□□ -1.81
CLK3-219ENST00000567805 NUDT19A8MXV4 375 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 ITGB1BP1O14713 200 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 RAB29O14966 203 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 SOCS1O15524 211 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 MRPS14O60783 128 aaKnown RBP3.76□□□□□ -1.81
CLK3-219ENST00000567805 IGHG4P01861 327 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 PRB2P02812 416 aaPredicted RBP3.76□□□□□ -1.81
CLK3-219ENST00000567805 IGF1P05019 195 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 ELANEP08246 267 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 OR5H8P0DN80 308 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 VDAC1P21796 283 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 ZBTB25P24278 435 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 MYCNOSP40205 109 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 MAP2K4P45985 399 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 OR3A3P47888 321 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 CDX1P47902 265 aaPredicted RBP3.76□□□□□ -1.81
CLK3-219ENST00000567805 THBS3P49746 956 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 VEGFCP49767 419 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 GABARAPL2P60520 117 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 ACTBP60709 375 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 HLA-DRB3P79483 266 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 CFHR3Q02985 330 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 FOXE3Q13461 319 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 MMDQ15546 238 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 C21orf62-AS1Q17RA5 79 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 PNLIPRP3Q17RR3 467 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 CXorf66Q5JRM2 361 aaPredicted RBP3.76□□□□□ -1.81
CLK3-219ENST00000567805 CD200R1LQ6Q8B3 271 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 ETV3LQ6ZN32 361 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 Q6ZPA2 131 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 C8orf86Q6ZUL3 223 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 C5orf24Q7Z6I8 188 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 ZNF695Q8IW36 515 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 MRPL41Q8IXM3 137 aaKnown RBP3.76□□□□□ -1.81
CLK3-219ENST00000567805 LINC00482Q8N8I6 264 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 RNF152Q8N8N0 203 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 OR56B1Q8NGI3 324 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 SETD6Q8TBK2 473 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 MRAPQ8TCY5 172 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 EDARADDQ8WWZ3 215 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 FAM3DQ96BQ1 224 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 ARHGAP5-AS1Q96IT6 56 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 P2RX4Q99571 388 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 NABP2Q9BQ15 211 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 HSPB9Q9BQS6 159 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 ZNF251Q9BRH9 671 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 MCRIP2Q9BUT9 160 aaKnown RBP3.76□□□□□ -1.81
CLK3-219ENST00000567805 MRPL20Q9BYC9 149 aaKnown RBP3.76□□□□□ -1.81
CLK3-219ENST00000567805 IFI27L2Q9H2X8 130 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 C12orf4Q9NQ89 552 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 AURKAIP1Q9NWT8 199 aaPredicted RBP3.76□□□□□ -1.81
CLK3-219ENST00000567805 NDUFB11Q9NX14 153 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 SLC23A1Q9UHI7 598 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 ZNF107Q9UII5 783 aaPredicted RBP3.76□□□□□ -1.81
CLK3-219ENST00000567805 RAB22AQ9UL26 194 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 V9GY05 133 aa3.76□□□□□ -1.81
CLK3-219ENST00000567805 TRAV1-2A0A0B4J238 106 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 TMEM272A0A1B0GTI8 110 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 OR5H14A6NHG9 310 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 IFITM5A6NNB3 132 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 CCL24O00175 119 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 PDCD5O14737 125 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 LDLRAD4O15165 306 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 NBR2O15453 112 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 HSPA12AO43301 675 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 DENRO43583 198 aaKnown RBP3.75□□□□□ -1.81
CLK3-219ENST00000567805 NDUFA3O95167 84 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 ATP6V1G2O95670 118 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 HLA-DRB1P01911 266 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 SLC2A2P11168 524 aaPredicted RBP3.75□□□□□ -1.81
CLK3-219ENST00000567805 RAB6AP20340 208 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 GALP22466 123 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 MYL9P24844 172 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 CNTFRP26992 372 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 PSMB8P28062 276 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 MC5RP33032 325 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 CEACAM6P40199 344 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 SERPINB10P48595 397 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 TMEM50BP56557 158 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 CLDN12P56749 244 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 MRPS15P82914 257 aaKnown RBP3.75□□□□□ -1.81
CLK3-219ENST00000567805 EGFEM1PQ0D2K5 195 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 KIR2DS1Q14954 304 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms