RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 IFI27L2Q9H2X8 130 aa12.6□□□□□ -0.39
CDH3-205ENST00000566808 MBNL3Q9NUK0 354 aaKnown RBP12.6□□□□□ -0.39
CDH3-205ENST00000566808 ING4Q9UNL4 249 aa12.6□□□□□ -0.39
CDH3-205ENST00000566808 WASHC3Q9Y3C0 194 aa12.6□□□□□ -0.39
CDH3-205ENST00000566808 DAPL1A0PJW8 107 aa12.59□□□□□ -0.39
CDH3-205ENST00000566808 MSGN1A6NI15 193 aa12.59□□□□□ -0.39
CDH3-205ENST00000566808 B2RBV5 119 aa12.59□□□□□ -0.39
CDH3-205ENST00000566808 H0YJW9 148 aa12.59□□□□□ -0.39
CDH3-205ENST00000566808 H7C2Y5 167 aa12.59□□□□□ -0.39
CDH3-205ENST00000566808 YPEL1O60688 119 aa12.59□□□□□ -0.39
CDH3-205ENST00000566808 ZNF780AO75290 641 aaPredicted RBP12.59□□□□□ -0.39
CDH3-205ENST00000566808 FKBP6O75344 327 aa12.59□□□□□ -0.39
CDH3-205ENST00000566808 MC5RP33032 325 aa12.59□□□□□ -0.39
CDH3-205ENST00000566808 HTD2P86397 168 aa12.59□□□□□ -0.39
CDH3-205ENST00000566808 OR5T1Q8NG75 326 aa12.59□□□□□ -0.39
CDH3-205ENST00000566808 OR8J1Q8NGP2 316 aa12.59□□□□□ -0.39
CDH3-205ENST00000566808 SNAPC3Q92966 411 aa12.59□□□□□ -0.39
CDH3-205ENST00000566808 USMG5Q96IX5 58 aa12.59□□□□□ -0.39
CDH3-205ENST00000566808 YPEL2Q96QA6 119 aa12.59□□□□□ -0.39
CDH3-205ENST00000566808 S100A13Q99584 98 aa12.59□□□□□ -0.39
CDH3-205ENST00000566808 TINAGL1Q9GZM7 467 aaPredicted RBP12.59□□□□□ -0.39
CDH3-205ENST00000566808 KCNIP1Q9NZI2 227 aa12.59□□□□□ -0.39
CDH3-205ENST00000566808 GMPPBQ9Y5P6 360 aa12.59□□□□□ -0.39
CDH3-205ENST00000566808 J3QLW9 94 aa12.58□□□□□ -0.4
CDH3-205ENST00000566808 MAS1P04201 325 aa12.58□□□□□ -0.4
CDH3-205ENST00000566808 GTF2F2P13984 249 aa12.58□□□□□ -0.4
CDH3-205ENST00000566808 ZNF19P17023 458 aa12.58□□□□□ -0.4
CDH3-205ENST00000566808 DEFA5Q01523 94 aa12.58□□□□□ -0.4
CDH3-205ENST00000566808 FXYD3Q14802 87 aa12.58□□□□□ -0.4
CDH3-205ENST00000566808 PSG5Q15238 335 aa12.58□□□□□ -0.4
CDH3-205ENST00000566808 DEFB114Q30KQ6 69 aa12.58□□□□□ -0.4
CDH3-205ENST00000566808 RAB12Q6IQ22 244 aa12.58□□□□□ -0.4
CDH3-205ENST00000566808 LINC00336Q6ZUF6 198 aa12.58□□□□□ -0.4
CDH3-205ENST00000566808 C4orf36Q96KX1 117 aa12.58□□□□□ -0.4
CDH3-205ENST00000566808 RIBC2Q9H4K1 309 aa12.58□□□□□ -0.4
CDH3-205ENST00000566808 TAS2R4Q9NYW5 299 aa12.58□□□□□ -0.4
CDH3-205ENST00000566808 PIPOXQ9P0Z9 390 aa12.58□□□□□ -0.4
CDH3-205ENST00000566808 DNAH2Q9P225 4427 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 A0A1W2PP11 408 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 J3QRE1 110 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 RAB29O14966 203 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 SC5DO75845 299 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 CT45A6P0DMU7 189 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 CT45A5P0DMU8 189 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 CT45A7P0DMV0 189 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 PRR20EP86478 221 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 PRR20CP86479 221 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 PRR20DP86480 221 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 PRR20BP86481 221 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 PRR20AP86496 221 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 DDI2Q5TDH0 399 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 GLDNQ6ZMI3 551 aaPredicted RBP12.57□□□□□ -0.4
CDH3-205ENST00000566808 Q6ZWC4 215 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 OR5AN1Q8NGI8 311 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 OR5AK2Q8NH90 309 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 WDR89Q96FK6 387 aaPredicted RBP12.57□□□□□ -0.4
CDH3-205ENST00000566808 TMEM68Q96MH6 324 aa12.57□□□□□ -0.4
CDH3-205ENST00000566808 TSNAXQ99598 290 aaKnown RBP12.57□□□□□ -0.4
CDH3-205ENST00000566808 TECRQ9NZ01 308 aaKnown RBP12.57□□□□□ -0.4
CDH3-205ENST00000566808 DCTN3O75935 186 aa12.56□□□□□ -0.4
CDH3-205ENST00000566808 ZNF93P35789 620 aaPredicted RBP12.56□□□□□ -0.4
CDH3-205ENST00000566808 LGALS7P47929 136 aa12.56□□□□□ -0.4
CDH3-205ENST00000566808 SLC22A6Q4U2R8 563 aa12.56□□□□□ -0.4
CDH3-205ENST00000566808 C6orf141Q5SZD1 244 aa12.56□□□□□ -0.4
CDH3-205ENST00000566808 KDM4DQ6B0I6 523 aa12.56□□□□□ -0.4
CDH3-205ENST00000566808 DMKNQ6E0U4 476 aaPredicted RBP12.56□□□□□ -0.4
CDH3-205ENST00000566808 MRPL48Q96GC5 212 aaKnown RBP12.56□□□□□ -0.4
CDH3-205ENST00000566808 BMPR1BO00238 502 aa12.55□□□□□ -0.4
CDH3-205ENST00000566808 ST8SIA5O15466 376 aa12.55□□□□□ -0.4
CDH3-205ENST00000566808 SPRY2O43597 315 aa12.55□□□□□ -0.4
CDH3-205ENST00000566808 CD2P06729 351 aa12.55□□□□□ -0.4
CDH3-205ENST00000566808 KIR2DS2P43631 304 aa12.55□□□□□ -0.4
CDH3-205ENST00000566808 SSBP2P81877 361 aaPredicted RBP12.55□□□□□ -0.4
CDH3-205ENST00000566808 GPR176Q14439 515 aa12.55□□□□□ -0.4
CDH3-205ENST00000566808 RPL39P5Q59GN2 51 aa12.55□□□□□ -0.4
CDH3-205ENST00000566808 ACBD7Q8N6N7 88 aa12.55□□□□□ -0.4
CDH3-205ENST00000566808 GALMQ96C23 342 aa12.55□□□□□ -0.4
CDH3-205ENST00000566808 PDCD1LG2Q9BQ51 273 aa12.55□□□□□ -0.4
CDH3-205ENST00000566808 TMEM138Q9NPI0 162 aa12.55□□□□□ -0.4
CDH3-205ENST00000566808 COA4Q9NYJ1 87 aa12.55□□□□□ -0.4
CDH3-205ENST00000566808 STEAP1Q9UHE8 339 aa12.55□□□□□ -0.4
CDH3-205ENST00000566808 A0A1B0GVY2 172 aa12.54□□□□□ -0.4
CDH3-205ENST00000566808 C2orf70A6NJV1 201 aa12.54□□□□□ -0.4
CDH3-205ENST00000566808 FOLR2P14207 255 aa12.54□□□□□ -0.4
CDH3-205ENST00000566808 APOC4P55056 127 aa12.54□□□□□ -0.4
CDH3-205ENST00000566808 PPP3R1P63098 170 aa12.54□□□□□ -0.4
CDH3-205ENST00000566808 DEFB135Q30KP9 77 aa12.54□□□□□ -0.4
CDH3-205ENST00000566808 SPATA24Q86W54 205 aa12.54□□□□□ -0.4
CDH3-205ENST00000566808 SYS1Q8N2H4 156 aa12.54□□□□□ -0.4
CDH3-205ENST00000566808 OR52B4Q8NGK2 314 aa12.54□□□□□ -0.4
CDH3-205ENST00000566808 MYCBPQ99417 103 aaPredicted RBP12.54□□□□□ -0.4
CDH3-205ENST00000566808 SULT4A1Q9BR01 284 aa12.54□□□□□ -0.4
CDH3-205ENST00000566808 PARP12Q9H0J9 701 aaKnown RBP12.54□□□□□ -0.4
CDH3-205ENST00000566808 PEX16Q9Y5Y5 336 aa12.54□□□□□ -0.4
CDH3-205ENST00000566808 DNAH11Q96DT5 4516 aa12.54□□□□□ -0.4
CDH3-205ENST00000566808 CPEP16870 476 aa12.53□□□□□ -0.4
CDH3-205ENST00000566808 FASP25445 335 aa12.53□□□□□ -0.4
CDH3-205ENST00000566808 SOX2P48431 317 aa12.53□□□□□ -0.4
CDH3-205ENST00000566808 MRPL28Q13084 256 aaKnown RBP12.53□□□□□ -0.4
CDH3-205ENST00000566808 MRPL30Q8TCC3 161 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms