RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 CFPP27918 469 aa9.87□□□□□ -0.83
CDH1-210ENST00000566612 PSG7Q13046 419 aa9.87□□□□□ -0.83
CDH1-210ENST00000566612 MRPL41Q8IXM3 137 aaKnown RBP9.87□□□□□ -0.83
CDH1-210ENST00000566612 OR5D13Q8NGL4 314 aa9.87□□□□□ -0.83
CDH1-210ENST00000566612 UHRF2Q96PU4 802 aa9.87□□□□□ -0.83
CDH1-210ENST00000566612 AURKAIP1Q9NWT8 199 aaPredicted RBP9.87□□□□□ -0.83
CDH1-210ENST00000566612 PRR14LQ5THK1 2151 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 ZNF705FA8MVS1 300 aaPredicted RBP9.86□□□□□ -0.83
CDH1-210ENST00000566612 LILRA1O75019 489 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 ZNF705DP0CH99 300 aaPredicted RBP9.86□□□□□ -0.83
CDH1-210ENST00000566612 ZNF705BP0CI00 300 aaPredicted RBP9.86□□□□□ -0.83
CDH1-210ENST00000566612 CISD2Q8N5K1 135 aaKnown RBP9.86□□□□□ -0.83
CDH1-210ENST00000566612 BCL2L2Q92843 193 aaPredicted RBP9.86□□□□□ -0.83
CDH1-210ENST00000566612 HS3ST6Q96QI5 342 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 DMRTA2Q96SC8 542 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 ABHD14AQ9BUJ0 271 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 DNASE2O00115 360 aaPredicted RBP9.86□□□□□ -0.83
CDH1-210ENST00000566612 MGST1P10620 155 aaKnown RBP9.86□□□□□ -0.83
CDH1-210ENST00000566612 RAB5AP20339 215 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 SSTR5P35346 364 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 TNFSF10P50591 281 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 CCL8P80075 99 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 TMEM41BQ5BJD5 291 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 DRAM1Q8N682 238 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 OR8G5Q8NG78 346 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 LEAP2Q969E1 77 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 IL36GQ9NZH8 169 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 GZMHP20718 246 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 BTNL8Q6UX41 500 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 RBMXL3Q8N7X1 1067 aaKnown RBP9.86□□□□□ -0.83
CDH1-210ENST00000566612 SSMEM1Q8WWF3 244 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 WDYHV1Q96HA8 205 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 OR4C12Q96R67 309 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 LRFN3Q9BTN0 628 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 CYTL1Q9NRR1 136 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 WIPI2Q9Y4P8 454 aa9.86□□□□□ -0.83
CDH1-210ENST00000566612 DUXBA0A1W2PPF3 345 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 MDKP21741 143 aaPredicted RBP9.85□□□□□ -0.83
CDH1-210ENST00000566612 RTL8BQ17RB0 113 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 EIF4E3Q8N5X7 224 aaKnown RBP9.85□□□□□ -0.83
CDH1-210ENST00000566612 OR2V2Q96R30 315 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 TMEM147Q9BVK8 224 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 PATZ1Q9HBE1 687 aaKnown RBP9.85□□□□□ -0.83
CDH1-210ENST00000566612 TUBD1Q9UJT1 453 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 MRPS18CQ9Y3D5 142 aaKnown RBP9.85□□□□□ -0.83
CDH1-210ENST00000566612 RFNGQ9Y644 331 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 MED13Q9UHV7 2174 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 TMEM210A6NLX4 147 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 PRR33A8MZF0 331 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 CLDN34H7C241 214 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 IGHV1-2P23083 117 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 CHRNA7P36544 502 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 MPV17P39210 176 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 RND3P61587 244 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 ACY3Q96HD9 319 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 DCTN5Q9BTE1 182 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 DBX1A6NMT0 343 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 CLDN14O95500 239 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 WNT5AP41221 380 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 HIST1H3AP68431 136 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 MRPS11P82912 194 aaKnown RBP9.85□□□□□ -0.83
CDH1-210ENST00000566612 TMEM37Q8WXS4 190 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 OR51I2Q9H344 312 aa9.85□□□□□ -0.83
CDH1-210ENST00000566612 VCANP13611 3396 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 SMPD2O60906 423 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 GABRA6Q16445 453 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 TMEM241Q24JQ0 296 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 Q6ZT83 130 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 MRPL30Q8TCC3 161 aaKnown RBP9.84□□□□□ -0.83
CDH1-210ENST00000566612 KIAA1456Q9P272 454 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 TRIOO75962 3097 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 GALR2O43603 387 aaPredicted RBP9.84□□□□□ -0.83
CDH1-210ENST00000566612 UCP1P25874 307 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 CDC34P49427 236 aaPredicted RBP9.84□□□□□ -0.83
CDH1-210ENST00000566612 GNB1P62873 340 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 NRN1LQ496H8 165 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 PLPPR1Q8TBJ4 325 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 FAM210BQ96KR6 192 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 SPRR3Q9UBC9 169 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 TECTAO75443 2155 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 TRAV24A0A0B4J272 114 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 SRSF6Q13247 344 aaKnown RBP9.84□□□□□ -0.83
CDH1-210ENST00000566612 TMEM108Q6UXF1 575 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 ITLN1Q8WWA0 313 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 SMIM8Q96KF7 97 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 FAM117AQ9C073 453 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 OR6C3Q9NZP0 311 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 MUC22E2RYF6 1773 aaPredicted RBP9.84□□□□□ -0.83
CDH1-210ENST00000566612 S1PR2O95136 353 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 CECR9P0C854 216 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 TNFRSF1AP19438 455 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 VKORC1L1Q8N0U8 176 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 ZNRF1Q8ND25 227 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 WFDC1Q9HC57 220 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 PLSCR2Q9NRY7 297 aa9.84□□□□□ -0.83
CDH1-210ENST00000566612 IGKV3D-15A0A087WSY6 115 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 FGF16O43320 207 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 S100A8P05109 93 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 OR5G3P0C626 314 aa9.83□□□□□ -0.84
CDH1-210ENST00000566612 ZNF880Q6PDB4 577 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms