RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 FAM25CB3EWG5 89 aa20.96■□□□□ 0.95
NME3-209ENST00000566600 FAM25GB3EWG6 89 aa20.96■□□□□ 0.95
NME3-209ENST00000566600 ST8SIA5O15466 376 aa20.96■□□□□ 0.95
NME3-209ENST00000566600 CHST1O43916 411 aa20.96■□□□□ 0.95
NME3-209ENST00000566600 CD24P25063 80 aa20.96■□□□□ 0.95
NME3-209ENST00000566600 FAM71F2Q6NXP2 309 aa20.96■□□□□ 0.95
NME3-209ENST00000566600 CNIH2Q6PI25 160 aa20.96■□□□□ 0.95
NME3-209ENST00000566600 C12orf54Q6X4T0 127 aa20.96■□□□□ 0.95
NME3-209ENST00000566600 ODF3L1Q8IXM7 274 aa20.96■□□□□ 0.95
NME3-209ENST00000566600 OR4C13Q8NGP0 309 aa20.96■□□□□ 0.95
NME3-209ENST00000566600 S1PR3Q99500 378 aa20.96■□□□□ 0.95
NME3-209ENST00000566600 ANXA10Q9UJ72 324 aa20.96■□□□□ 0.95
NME3-209ENST00000566600 MMP24Q9Y5R2 645 aa20.96■□□□□ 0.95
NME3-209ENST00000566600 TSPAN9O75954 239 aa20.95■□□□□ 0.94
NME3-209ENST00000566600 RELBQ01201 579 aa20.95■□□□□ 0.94
NME3-209ENST00000566600 AWAT1Q58HT5 328 aa20.95■□□□□ 0.94
NME3-209ENST00000566600 ZNF833PQ6ZTB9 187 aa20.95■□□□□ 0.94
NME3-209ENST00000566600 HOGA1Q86XE5 327 aa20.95■□□□□ 0.94
NME3-209ENST00000566600 BEST4Q8NFU0 473 aa20.95■□□□□ 0.94
NME3-209ENST00000566600 AGMATQ9BSE5 352 aa20.95■□□□□ 0.94
NME3-209ENST00000566600 PARP12Q9H0J9 701 aaKnown RBP20.95■□□□□ 0.94
NME3-209ENST00000566600 ADAM30Q9UKF2 790 aa20.95■□□□□ 0.94
NME3-209ENST00000566600 SAA2-SAA4A0A096LPE2 208 aa20.94■□□□□ 0.94
NME3-209ENST00000566600 ZNF701M0R085 212 aaPredicted RBP20.94■□□□□ 0.94
NME3-209ENST00000566600 OR2F2O95006 317 aa20.94■□□□□ 0.94
NME3-209ENST00000566600 SNRNP70P08621 437 aaKnown RBP20.94■□□□□ 0.94
NME3-209ENST00000566600 SAA2P0DJI9 122 aaPredicted RBP20.94■□□□□ 0.94
NME3-209ENST00000566600 CD1BP29016 333 aa20.94■□□□□ 0.94
NME3-209ENST00000566600 PRSS3P35030 304 aa20.94■□□□□ 0.94
NME3-209ENST00000566600 HES1Q14469 280 aa20.94■□□□□ 0.94
NME3-209ENST00000566600 Q6ZSV7 163 aa20.94■□□□□ 0.94
NME3-209ENST00000566600 RBM14Q96PK6 669 aaKnown RBP20.94■□□□□ 0.94
NME3-209ENST00000566600 C16orf95Q9H693 158 aa20.94■□□□□ 0.94
NME3-209ENST00000566600 RSL24D1Q9UHA3 163 aaKnown RBP20.94■□□□□ 0.94
NME3-209ENST00000566600 ZNF221Q9UK13 617 aa20.94■□□□□ 0.94
NME3-209ENST00000566600 MRPS7Q9Y2R9 242 aaKnown RBP20.94■□□□□ 0.94
NME3-209ENST00000566600 RGS5O15539 181 aa20.93■□□□□ 0.94
NME3-209ENST00000566600 PTHLHP12272 177 aa20.93■□□□□ 0.94
NME3-209ENST00000566600 OR3A3P47888 321 aa20.93■□□□□ 0.94
NME3-209ENST00000566600 ARPC4P59998 168 aa20.93■□□□□ 0.94
NME3-209ENST00000566600 TAF15Q92804 592 aaKnown RBP eCLIP20.93■□□□□ 0.94
NME3-209ENST00000566600 SLC25A33Q9BSK2 321 aa20.93■□□□□ 0.94
NME3-209ENST00000566600 RBM38Q9H0Z9 239 aaKnown RBP20.93■□□□□ 0.94
NME3-209ENST00000566600 IFT46Q9NQC8 304 aa20.93■□□□□ 0.94
NME3-209ENST00000566600 TPPPO94811 219 aa20.92■□□□□ 0.94
NME3-209ENST00000566600 IGKV1D-33P01593 117 aa20.92■□□□□ 0.94
NME3-209ENST00000566600 IGKV1-33P01594 117 aa20.92■□□□□ 0.94
NME3-209ENST00000566600 HLA-DQB1P01920 261 aa20.92■□□□□ 0.94
NME3-209ENST00000566600 EBI3Q14213 229 aa20.92■□□□□ 0.94
NME3-209ENST00000566600 H1FOOQ8IZA3 346 aaPredicted RBP20.92■□□□□ 0.94
NME3-209ENST00000566600 GVQW1Q8N7I0 195 aa20.92■□□□□ 0.94
NME3-209ENST00000566600 C15orf40Q8WUR7 153 aa20.92■□□□□ 0.94
NME3-209ENST00000566600 ABHD14BQ96IU4 210 aa20.92■□□□□ 0.94
NME3-209ENST00000566600 SCPEP1Q9HB40 452 aa20.92■□□□□ 0.94
NME3-209ENST00000566600 STAB1Q9NY15 2570 aa20.92■□□□□ 0.94
NME3-209ENST00000566600 CLPSL1A2RUU4 121 aa20.91■□□□□ 0.94
NME3-209ENST00000566600 M0QZK8 103 aa20.91■□□□□ 0.94
NME3-209ENST00000566600 TMEM11P17152 192 aa20.91■□□□□ 0.94
NME3-209ENST00000566600 MDKP21741 143 aaPredicted RBP20.91■□□□□ 0.94
NME3-209ENST00000566600 GPR12P47775 334 aa20.91■□□□□ 0.94
NME3-209ENST00000566600 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.91■□□□□ 0.94
NME3-209ENST00000566600 OR2T10Q8NGZ9 312 aa20.91■□□□□ 0.94
NME3-209ENST00000566600 EXTL2Q9UBQ6 330 aa20.91■□□□□ 0.94
NME3-209ENST00000566600 RNF150Q9ULK6 438 aa20.91■□□□□ 0.94
NME3-209ENST00000566600 IGHV3-72A0A0B4J1Y9 119 aa20.9■□□□□ 0.94
NME3-209ENST00000566600 OR8U9P0C7N5 309 aa20.9■□□□□ 0.94
NME3-209ENST00000566600 LSAMPQ13449 338 aa20.9■□□□□ 0.94
NME3-209ENST00000566600 OR8U1Q8NH10 309 aa20.9■□□□□ 0.94
NME3-209ENST00000566600 LINC01006Q8NI28 216 aa20.9■□□□□ 0.94
NME3-209ENST00000566600 ZNF251Q9BRH9 671 aa20.9■□□□□ 0.94
NME3-209ENST00000566600 MRPL20Q9BYC9 149 aaKnown RBP20.9■□□□□ 0.94
NME3-209ENST00000566600 PRSS22Q9GZN4 317 aa20.9■□□□□ 0.94
NME3-209ENST00000566600 RBM7Q9Y580 266 aaKnown RBP20.9■□□□□ 0.94
NME3-209ENST00000566600 CTDSP2O14595 271 aa20.89■□□□□ 0.93
NME3-209ENST00000566600 RPL39P5Q59GN2 51 aa20.89■□□□□ 0.93
NME3-209ENST00000566600 SNX29P2Q8IUI4 249 aa20.89■□□□□ 0.93
NME3-209ENST00000566600 C3orf56Q8N813 242 aa20.89■□□□□ 0.93
NME3-209ENST00000566600 OR2T6Q8NHC8 308 aa20.89■□□□□ 0.93
NME3-209ENST00000566600 EAF1Q96JC9 268 aaPredicted RBP20.89■□□□□ 0.93
NME3-209ENST00000566600 NABP2Q9BQ15 211 aa20.89■□□□□ 0.93
NME3-209ENST00000566600 SLIRPQ9GZT3 109 aaKnown RBP20.89■□□□□ 0.93
NME3-209ENST00000566600 NECAP2Q9NVZ3 263 aa20.89■□□□□ 0.93
NME3-209ENST00000566600 NDUFA13Q9P0J0 144 aa20.89■□□□□ 0.93
NME3-209ENST00000566600 GAB2Q9UQC2 676 aa20.89■□□□□ 0.93
NME3-209ENST00000566600 MOB4Q9Y3A3 225 aa20.89■□□□□ 0.93
NME3-209ENST00000566600 TENM1Q9UKZ4 2725 aa20.88■□□□□ 0.93
NME3-209ENST00000566600 MEIS3P1A6NDR6 274 aa20.88■□□□□ 0.93
NME3-209ENST00000566600 SULT1C2O00338 296 aa20.88■□□□□ 0.93
NME3-209ENST00000566600 MOSP00540 346 aa20.88■□□□□ 0.93
NME3-209ENST00000566600 HNF4GQ14541 408 aa20.88■□□□□ 0.93
NME3-209ENST00000566600 C11orf88Q6PI97 169 aa20.88■□□□□ 0.93
NME3-209ENST00000566600 GPX8Q8TED1 209 aa20.88■□□□□ 0.93
NME3-209ENST00000566600 C6orf62Q9GZU0 229 aaPredicted RBP20.88■□□□□ 0.93
NME3-209ENST00000566600 OR2D2Q9H210 308 aa20.88■□□□□ 0.93
NME3-209ENST00000566600 MIXL1Q9H2W2 232 aa20.88■□□□□ 0.93
NME3-209ENST00000566600 ANAPC10Q9UM13 185 aa20.88■□□□□ 0.93
NME3-209ENST00000566600 OR2W1Q9Y3N9 320 aa20.88■□□□□ 0.93
NME3-209ENST00000566600 RNF114Q9Y508 228 aa20.88■□□□□ 0.93
NME3-209ENST00000566600 LAX1Q8IWV1 398 aa20.87■□□□□ 0.93
NME3-209ENST00000566600 OR5AP2Q8NGF4 316 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms