RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 TSPAN7P41732 249 aa18.29■□□□□ 0.52
SPSB3-208ENST00000566339 CYB561P49447 251 aa18.29■□□□□ 0.52
SPSB3-208ENST00000566339 RAB4BP61018 213 aa18.29■□□□□ 0.52
SPSB3-208ENST00000566339 TMEM249Q2WGJ8 235 aa18.29■□□□□ 0.52
SPSB3-208ENST00000566339 PEAR1Q5VY43 1037 aaPredicted RBP18.29■□□□□ 0.52
SPSB3-208ENST00000566339 C16orf82Q7Z2V1 217 aa18.29■□□□□ 0.52
SPSB3-208ENST00000566339 OR51I2Q9H344 312 aa18.29■□□□□ 0.52
SPSB3-208ENST00000566339 MBNL3Q9NUK0 354 aaKnown RBP18.29■□□□□ 0.52
SPSB3-208ENST00000566339 HSPB7Q9UBY9 170 aa18.29■□□□□ 0.52
SPSB3-208ENST00000566339 GDF9O60383 454 aa18.28■□□□□ 0.52
SPSB3-208ENST00000566339 SYNGR4O95473 234 aa18.28■□□□□ 0.52
SPSB3-208ENST00000566339 HRASP01112 189 aa18.28■□□□□ 0.52
SPSB3-208ENST00000566339 RD3LP0DJH9 198 aa18.28■□□□□ 0.52
SPSB3-208ENST00000566339 IAPPP10997 89 aa18.28■□□□□ 0.52
SPSB3-208ENST00000566339 CDCP2Q5VXM1 449 aa18.28■□□□□ 0.52
SPSB3-208ENST00000566339 ZNF497Q6ZNH5 498 aa18.28■□□□□ 0.52
SPSB3-208ENST00000566339 SSX7Q7RTT5 188 aa18.28■□□□□ 0.52
SPSB3-208ENST00000566339 C5orf24Q7Z6I8 188 aa18.28■□□□□ 0.52
SPSB3-208ENST00000566339 SNX22Q96L94 193 aa18.28■□□□□ 0.52
SPSB3-208ENST00000566339 ZNF552Q9H707 407 aaPredicted RBP18.28■□□□□ 0.52
SPSB3-208ENST00000566339 COL27A1Q8IZC6 1860 aaPredicted RBP18.28■□□□□ 0.52
SPSB3-208ENST00000566339 SLC31A2O15432 143 aa18.27■□□□□ 0.52
SPSB3-208ENST00000566339 GGCTO75223 188 aaKnown RBP18.27■□□□□ 0.52
SPSB3-208ENST00000566339 CCKARP32238 428 aa18.27■□□□□ 0.52
SPSB3-208ENST00000566339 TAS2R60P59551 318 aa18.27■□□□□ 0.52
SPSB3-208ENST00000566339 RPL23P62829 140 aaKnown RBP18.27■□□□□ 0.52
SPSB3-208ENST00000566339 BATF2Q8N1L9 274 aa18.27■□□□□ 0.52
SPSB3-208ENST00000566339 CISD2Q8N5K1 135 aaKnown RBP18.27■□□□□ 0.52
SPSB3-208ENST00000566339 SSX3Q99909 188 aa18.27■□□□□ 0.52
SPSB3-208ENST00000566339 CRIM1Q9NZV1 1036 aa18.27■□□□□ 0.52
SPSB3-208ENST00000566339 B4GALT7Q9UBV7 327 aa18.27■□□□□ 0.52
SPSB3-208ENST00000566339 ARGFXA6NJG6 315 aa18.27■□□□□ 0.51
SPSB3-208ENST00000566339 HSPB6O14558 160 aa18.27■□□□□ 0.51
SPSB3-208ENST00000566339 CD99P14209 185 aa18.27■□□□□ 0.51
SPSB3-208ENST00000566339 GALR1P47211 349 aa18.27■□□□□ 0.51
SPSB3-208ENST00000566339 FGF8P55075 233 aaPredicted RBP18.27■□□□□ 0.51
SPSB3-208ENST00000566339 LCN2P80188 198 aa18.27■□□□□ 0.51
SPSB3-208ENST00000566339 ADIRFQ15847 76 aa18.27■□□□□ 0.51
SPSB3-208ENST00000566339 RDH5Q92781 318 aa18.27■□□□□ 0.51
SPSB3-208ENST00000566339 CIB3Q96Q77 187 aaPredicted RBP18.27■□□□□ 0.51
SPSB3-208ENST00000566339 POLDIP2Q9Y2S7 368 aa18.27■□□□□ 0.51
SPSB3-208ENST00000566339 CEP250Q9BV73 2442 aa18.26■□□□□ 0.51
SPSB3-208ENST00000566339 HS3ST1O14792 307 aa18.26■□□□□ 0.51
SPSB3-208ENST00000566339 AMBPP02760 352 aa18.26■□□□□ 0.51
SPSB3-208ENST00000566339 CCNOP22674 350 aa18.26■□□□□ 0.51
SPSB3-208ENST00000566339 TNFRSF9Q07011 255 aa18.26■□□□□ 0.51
SPSB3-208ENST00000566339 SSPNQ14714 243 aa18.26■□□□□ 0.51
SPSB3-208ENST00000566339 PDZD11Q5EBL8 140 aa18.26■□□□□ 0.51
SPSB3-208ENST00000566339 RPP25LQ8N5L8 163 aaKnown RBP18.26■□□□□ 0.51
SPSB3-208ENST00000566339 IMMP2LQ96T52 175 aa18.26■□□□□ 0.51
SPSB3-208ENST00000566339 FAM173AQ9BQD7 235 aa18.26■□□□□ 0.51
SPSB3-208ENST00000566339 DEPPQ9NTK1 212 aa18.26■□□□□ 0.51
SPSB3-208ENST00000566339 SLC33A1O00400 549 aaPredicted RBP18.25■□□□□ 0.51
SPSB3-208ENST00000566339 FOSL1P15407 271 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 LHX2P50458 406 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 VWC2Q2TAL6 325 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 SPANXN5Q5MJ07 72 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 RTL8AQ9BWD3 113 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 PRRG4Q9BZD6 226 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 CHODLQ9H9P2 273 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 OR1A1Q9P1Q5 309 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 NCKAP5O14513 1909 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 P0C879 139 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 GZMBP10144 247 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 CCL4P13236 92 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 COX5AP20674 150 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 COL10A1Q03692 680 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 Q3ZCU0 254 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 KCNIP4Q6PIL6 250 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 FGFRL1Q8N441 504 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 LAMP3Q9UQV4 416 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 TP53TG5Q9Y2B4 290 aa18.25■□□□□ 0.51
SPSB3-208ENST00000566339 ERVK11-1P61568 191 aa18.24■□□□□ 0.51
SPSB3-208ENST00000566339 Q0VFX4 171 aa18.24■□□□□ 0.51
SPSB3-208ENST00000566339 ACTL10Q5JWF8 245 aa18.24■□□□□ 0.51
SPSB3-208ENST00000566339 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.24■□□□□ 0.51
SPSB3-208ENST00000566339 APH1AQ96BI3 265 aa18.24■□□□□ 0.51
SPSB3-208ENST00000566339 RBM7Q9Y580 266 aaKnown RBP18.24■□□□□ 0.51
SPSB3-208ENST00000566339 UBE2L5PA0A1B0GUS4 154 aa18.23■□□□□ 0.51
SPSB3-208ENST00000566339 C4orf17Q53FE4 359 aa18.23■□□□□ 0.51
SPSB3-208ENST00000566339 ZNF645Q8N7E2 425 aa18.23■□□□□ 0.51
SPSB3-208ENST00000566339 NANOS1Q8WY41 292 aaKnown RBP18.23■□□□□ 0.51
SPSB3-208ENST00000566339 TMEM18Q96B42 140 aa18.23■□□□□ 0.51
SPSB3-208ENST00000566339 NEIL1Q96FI4 390 aaPredicted RBP18.23■□□□□ 0.51
SPSB3-208ENST00000566339 DIRC2Q96SL1 478 aa18.23■□□□□ 0.51
SPSB3-208ENST00000566339 TXNDC17Q9BRA2 123 aa18.23■□□□□ 0.51
SPSB3-208ENST00000566339 NDUFAF3Q9BU61 184 aa18.23■□□□□ 0.51
SPSB3-208ENST00000566339 PARLQ9H300 379 aa18.23■□□□□ 0.51
SPSB3-208ENST00000566339 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.23■□□□□ 0.51
SPSB3-208ENST00000566339 TRAPPC2LQ9UL33 140 aa18.23■□□□□ 0.51
SPSB3-208ENST00000566339 GAB2Q9UQC2 676 aa18.23■□□□□ 0.51
SPSB3-208ENST00000566339 PPP1R3CQ9UQK1 317 aa18.23■□□□□ 0.51
SPSB3-208ENST00000566339 A8MWP6 167 aa18.22■□□□□ 0.51
SPSB3-208ENST00000566339 C17orf112F2Z3M2 114 aa18.22■□□□□ 0.51
SPSB3-208ENST00000566339 CLDN18P56856 261 aa18.22■□□□□ 0.51
SPSB3-208ENST00000566339 CATR1Q13166 79 aa18.22■□□□□ 0.51
SPSB3-208ENST00000566339 ZNF146Q15072 292 aa18.22■□□□□ 0.51
SPSB3-208ENST00000566339 DRAM1Q8N682 238 aa18.22■□□□□ 0.51
SPSB3-208ENST00000566339 OR2T10Q8NGZ9 312 aa18.22■□□□□ 0.51
SPSB3-208ENST00000566339 IL1F10Q8WWZ1 152 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms