RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 SAA2P0DJI9 122 aaPredicted RBP16.87■□□□□ 0.29
SHCBP1-205ENST00000566016 CBX5P45973 191 aa16.87■□□□□ 0.29
SHCBP1-205ENST00000566016 REG1BP48304 166 aa16.87■□□□□ 0.29
SHCBP1-205ENST00000566016 TAS2R20P59543 309 aa16.87■□□□□ 0.29
SHCBP1-205ENST00000566016 C12orf54Q6X4T0 127 aa16.87■□□□□ 0.29
SHCBP1-205ENST00000566016 OR4C13Q8NGP0 309 aa16.87■□□□□ 0.29
SHCBP1-205ENST00000566016 ST6GALNAC5Q9BVH7 336 aa16.87■□□□□ 0.29
SHCBP1-205ENST00000566016 BEX1Q9HBH7 125 aa16.87■□□□□ 0.29
SHCBP1-205ENST00000566016 RDH8Q9NYR8 311 aa16.87■□□□□ 0.29
SHCBP1-205ENST00000566016 IGKV1D-8A0A087WSZ0 117 aa16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 BET1O15155 118 aa16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 OR2F2O95006 317 aa16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 EBI3Q14213 229 aa16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 TAF15Q92804 592 aaKnown RBP eCLIP16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 RBM14Q96PK6 669 aaKnown RBP16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 C11orf54Q9H0W9 315 aaPredicted RBP16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 SMIM31A0A1B0GVY4 71 aa16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 ST8SIA5O15466 376 aa16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 HPGDSO60760 199 aa16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 SNRNP70P08621 437 aaKnown RBP16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 ELK1P19419 428 aa16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 MDKP21741 143 aaPredicted RBP16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 CD24P25063 80 aa16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 CD1BP29016 333 aa16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 CNIH2Q6PI25 160 aa16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 LINC01006Q8NI28 216 aa16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 CAPSLQ8WWF8 208 aa16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 RBM38Q9H0Z9 239 aaKnown RBP16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 ANXA10Q9UJ72 324 aa16.86■□□□□ 0.29
SHCBP1-205ENST00000566016 CLPSL1A2RUU4 121 aa16.85■□□□□ 0.29
SHCBP1-205ENST00000566016 M0QZK8 103 aa16.85■□□□□ 0.29
SHCBP1-205ENST00000566016 ZNF701M0R085 212 aaPredicted RBP16.85■□□□□ 0.29
SHCBP1-205ENST00000566016 TPPPO94811 219 aa16.85■□□□□ 0.29
SHCBP1-205ENST00000566016 MOB3BQ86TA1 216 aa16.85■□□□□ 0.29
SHCBP1-205ENST00000566016 HOGA1Q86XE5 327 aa16.85■□□□□ 0.29
SHCBP1-205ENST00000566016 Q8N2B8 174 aa16.85■□□□□ 0.29
SHCBP1-205ENST00000566016 BEST4Q8NFU0 473 aa16.85■□□□□ 0.29
SHCBP1-205ENST00000566016 S1PR3Q99500 378 aa16.85■□□□□ 0.29
SHCBP1-205ENST00000566016 ZNF251Q9BRH9 671 aa16.85■□□□□ 0.29
SHCBP1-205ENST00000566016 GINS4Q9BRT9 223 aa16.85■□□□□ 0.29
SHCBP1-205ENST00000566016 SLC25A33Q9BSK2 321 aa16.85■□□□□ 0.29
SHCBP1-205ENST00000566016 ADAM30Q9UKF2 790 aa16.85■□□□□ 0.29
SHCBP1-205ENST00000566016 LSAMPQ13449 338 aa16.84■□□□□ 0.29
SHCBP1-205ENST00000566016 FBLN7Q53RD9 439 aa16.84■□□□□ 0.29
SHCBP1-205ENST00000566016 H1FOOQ8IZA3 346 aaPredicted RBP16.84■□□□□ 0.29
SHCBP1-205ENST00000566016 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.84■□□□□ 0.29
SHCBP1-205ENST00000566016 ANAPC10Q9UM13 185 aa16.84■□□□□ 0.29
SHCBP1-205ENST00000566016 IGKV1D-33P01593 117 aa16.83■□□□□ 0.28
SHCBP1-205ENST00000566016 IGKV1-33P01594 117 aa16.83■□□□□ 0.28
SHCBP1-205ENST00000566016 HLA-DQB1P01920 261 aa16.83■□□□□ 0.28
SHCBP1-205ENST00000566016 OR3A3P47888 321 aa16.83■□□□□ 0.28
SHCBP1-205ENST00000566016 C11orf88Q6PI97 169 aa16.83■□□□□ 0.28
SHCBP1-205ENST00000566016 PTHLHP12272 177 aa16.82■□□□□ 0.28
SHCBP1-205ENST00000566016 TMEM11P17152 192 aa16.82■□□□□ 0.28
SHCBP1-205ENST00000566016 PRSS3P35030 304 aa16.82■□□□□ 0.28
SHCBP1-205ENST00000566016 HES1Q14469 280 aa16.82■□□□□ 0.28
SHCBP1-205ENST00000566016 Q8N6K4 173 aa16.82■□□□□ 0.28
SHCBP1-205ENST00000566016 GVQW1Q8N7I0 195 aa16.82■□□□□ 0.28
SHCBP1-205ENST00000566016 OR2T10Q8NGZ9 312 aa16.82■□□□□ 0.28
SHCBP1-205ENST00000566016 OR2T6Q8NHC8 308 aa16.82■□□□□ 0.28
SHCBP1-205ENST00000566016 ABHD14BQ96IU4 210 aa16.82■□□□□ 0.28
SHCBP1-205ENST00000566016 NABP2Q9BQ15 211 aa16.82■□□□□ 0.28
SHCBP1-205ENST00000566016 MRPL20Q9BYC9 149 aaKnown RBP16.82■□□□□ 0.28
SHCBP1-205ENST00000566016 SLIRPQ9GZT3 109 aaKnown RBP16.82■□□□□ 0.28
SHCBP1-205ENST00000566016 SCPEP1Q9HB40 452 aa16.82■□□□□ 0.28
SHCBP1-205ENST00000566016 ZNF221Q9UK13 617 aa16.82■□□□□ 0.28
SHCBP1-205ENST00000566016 GAB2Q9UQC2 676 aa16.82■□□□□ 0.28
SHCBP1-205ENST00000566016 MOB4Q9Y3A3 225 aa16.82■□□□□ 0.28
SHCBP1-205ENST00000566016 MOSP00540 346 aa16.81■□□□□ 0.28
SHCBP1-205ENST00000566016 C3orf56Q8N813 242 aa16.81■□□□□ 0.28
SHCBP1-205ENST00000566016 SNAPC3Q92966 411 aa16.81■□□□□ 0.28
SHCBP1-205ENST00000566016 EAF1Q96JC9 268 aaPredicted RBP16.81■□□□□ 0.28
SHCBP1-205ENST00000566016 PRSS22Q9GZN4 317 aa16.81■□□□□ 0.28
SHCBP1-205ENST00000566016 ZNF702PQ9H963 129 aa16.81■□□□□ 0.28
SHCBP1-205ENST00000566016 RSL24D1Q9UHA3 163 aaKnown RBP16.81■□□□□ 0.28
SHCBP1-205ENST00000566016 RNF114Q9Y508 228 aa16.81■□□□□ 0.28
SHCBP1-205ENST00000566016 IGHV3-72A0A0B4J1Y9 119 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 FAM25AB3EWG3 89 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 FAM25CB3EWG5 89 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 FAM25GB3EWG6 89 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 FGF16O43320 207 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 GPR12P47775 334 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 PROK1P58294 105 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 ARPC4P59998 168 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 RPL39P5Q59GN2 51 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 OR8H1Q8NGG4 311 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 WFDC12Q8WWY7 111 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 ZNF747Q9BV97 191 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 IFT46Q9NQC8 304 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 CCDC160A6NGH7 325 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 OR5H14A6NHG9 310 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 AMY1AP04745 511 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 AMY2AP04746 511 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 OR8U9P0C7N5 309 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 NAT1P18440 290 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 OR8U1Q8NH10 309 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 GPX8Q8TED1 209 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 C15orf40Q8WUR7 153 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 OR2D2Q9H210 308 aa16.8■□□□□ 0.28
SHCBP1-205ENST00000566016 MIXL1Q9H2W2 232 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms