RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 AQP4P55087 323 aa18.46■□□□□ 0.55
RAB40C-209ENST00000565511 RPS25P62851 125 aaKnown RBP18.46■□□□□ 0.55
RAB40C-209ENST00000565511 MED22Q15528 200 aa18.46■□□□□ 0.55
RAB40C-209ENST00000565511 C19orf54Q5BKX5 351 aa18.46■□□□□ 0.55
RAB40C-209ENST00000565511 ZNF491Q8N8L2 437 aa18.46■□□□□ 0.55
RAB40C-209ENST00000565511 NPBQ8NG41 125 aa18.46■□□□□ 0.55
RAB40C-209ENST00000565511 OR11H1Q8NG94 326 aa18.46■□□□□ 0.55
RAB40C-209ENST00000565511 KCNG3Q8TAE7 436 aa18.46■□□□□ 0.55
RAB40C-209ENST00000565511 SETD6Q8TBK2 473 aa18.46■□□□□ 0.55
RAB40C-209ENST00000565511 OR1A1Q9P1Q5 309 aa18.46■□□□□ 0.55
RAB40C-209ENST00000565511 AK3Q9UIJ7 227 aa18.46■□□□□ 0.55
RAB40C-209ENST00000565511 LSM4Q9Y4Z0 139 aaKnown RBP18.46■□□□□ 0.55
RAB40C-209ENST00000565511 SEC14L6B5MCN3 397 aa18.45■□□□□ 0.54
RAB40C-209ENST00000565511 I3L521 148 aa18.45■□□□□ 0.54
RAB40C-209ENST00000565511 SOX15O60248 233 aa18.45■□□□□ 0.54
RAB40C-209ENST00000565511 RGS11O94810 467 aa18.45■□□□□ 0.54
RAB40C-209ENST00000565511 BPNT1O95861 308 aa18.45■□□□□ 0.54
RAB40C-209ENST00000565511 CT45A6P0DMU7 189 aa18.45■□□□□ 0.54
RAB40C-209ENST00000565511 CT45A5P0DMU8 189 aa18.45■□□□□ 0.54
RAB40C-209ENST00000565511 CT45A7P0DMV0 189 aa18.45■□□□□ 0.54
RAB40C-209ENST00000565511 ABHD14BQ96IU4 210 aa18.45■□□□□ 0.54
RAB40C-209ENST00000565511 HUWE1Q7Z6Z7 4374 aaKnown RBP18.44■□□□□ 0.54
RAB40C-209ENST00000565511 TRAV41A0A0B4J266 112 aa18.44■□□□□ 0.54
RAB40C-209ENST00000565511 C9orf66Q5T8R8 295 aa18.44■□□□□ 0.54
RAB40C-209ENST00000565511 OR6M1Q8NGM8 313 aa18.44■□□□□ 0.54
RAB40C-209ENST00000565511 CASTOR1Q8WTX7 329 aa18.44■□□□□ 0.54
RAB40C-209ENST00000565511 ALX4Q9H161 411 aaPredicted RBP18.44■□□□□ 0.54
RAB40C-209ENST00000565511 FBXL15Q9H469 300 aa18.44■□□□□ 0.54
RAB40C-209ENST00000565511 CHMP1AQ9HD42 196 aaPredicted RBP18.44■□□□□ 0.54
RAB40C-209ENST00000565511 ABRACLQ9P1F3 81 aa18.44■□□□□ 0.54
RAB40C-209ENST00000565511 SLC23A1Q9UHI7 598 aa18.44■□□□□ 0.54
RAB40C-209ENST00000565511 OR5H8P0DN80 308 aa18.43■□□□□ 0.54
RAB40C-209ENST00000565511 ECI1P42126 302 aa18.43■□□□□ 0.54
RAB40C-209ENST00000565511 PLA2G7Q13093 441 aa18.43■□□□□ 0.54
RAB40C-209ENST00000565511 MINDY2Q8NBR6 621 aa18.43■□□□□ 0.54
RAB40C-209ENST00000565511 AGMATQ9BSE5 352 aa18.43■□□□□ 0.54
RAB40C-209ENST00000565511 GAB2Q9UQC2 676 aa18.43■□□□□ 0.54
RAB40C-209ENST00000565511 AK6Q9Y3D8 172 aaKnown RBP18.43■□□□□ 0.54
RAB40C-209ENST00000565511 STAB2Q8WWQ8 2551 aa18.42■□□□□ 0.54
RAB40C-209ENST00000565511 TRBV6-6A0A0A6YYG2 114 aa18.42■□□□□ 0.54
RAB40C-209ENST00000565511 H0YJW9 148 aa18.42■□□□□ 0.54
RAB40C-209ENST00000565511 FCN1O00602 326 aa18.42■□□□□ 0.54
RAB40C-209ENST00000565511 PROP1O75360 226 aa18.42■□□□□ 0.54
RAB40C-209ENST00000565511 EGR2P11161 476 aaPredicted RBP18.42■□□□□ 0.54
RAB40C-209ENST00000565511 TMEM50BP56557 158 aa18.42■□□□□ 0.54
RAB40C-209ENST00000565511 CLDN12P56749 244 aa18.42■□□□□ 0.54
RAB40C-209ENST00000565511 LINC00205P59089 165 aa18.42■□□□□ 0.54
RAB40C-209ENST00000565511 ECSCRQ19T08 205 aa18.42■□□□□ 0.54
RAB40C-209ENST00000565511 LIN54Q6MZP7 749 aa18.42■□□□□ 0.54
RAB40C-209ENST00000565511 FAM71F2Q6NXP2 309 aa18.42■□□□□ 0.54
RAB40C-209ENST00000565511 UFD1Q92890 307 aa18.42■□□□□ 0.54
RAB40C-209ENST00000565511 UBE2E2Q96LR5 201 aa18.42■□□□□ 0.54
RAB40C-209ENST00000565511 PLEKHJ1Q9NW61 149 aa18.42■□□□□ 0.54
RAB40C-209ENST00000565511 STEAP1Q9UHE8 339 aa18.42■□□□□ 0.54
RAB40C-209ENST00000565511 LRRC42Q9Y546 428 aa18.42■□□□□ 0.54
RAB40C-209ENST00000565511 SORL1Q92673 2214 aa18.42■□□□□ 0.54
RAB40C-209ENST00000565511 IGKV1-6A0A0C4DH72 117 aa18.41■□□□□ 0.54
RAB40C-209ENST00000565511 SLC17A2O00624 439 aa18.41■□□□□ 0.54
RAB40C-209ENST00000565511 RAMP3O60896 148 aa18.41■□□□□ 0.54
RAB40C-209ENST00000565511 SCTP09683 121 aa18.41■□□□□ 0.54
RAB40C-209ENST00000565511 RAB9AP51151 201 aa18.41■□□□□ 0.54
RAB40C-209ENST00000565511 HLA-DRB3P79483 266 aa18.41■□□□□ 0.54
RAB40C-209ENST00000565511 RUNX1Q01196 453 aa18.41■□□□□ 0.54
RAB40C-209ENST00000565511 TPBGQ13641 420 aa18.41■□□□□ 0.54
RAB40C-209ENST00000565511 ZNF260Q3ZCT1 412 aa18.41■□□□□ 0.54
RAB40C-209ENST00000565511 MOB1BQ7L9L4 216 aa18.41■□□□□ 0.54
RAB40C-209ENST00000565511 FAM89BQ8N5H3 189 aa18.41■□□□□ 0.54
RAB40C-209ENST00000565511 OR1N2Q8NGR9 330 aa18.41■□□□□ 0.54
RAB40C-209ENST00000565511 C11orf54Q9H0W9 315 aaPredicted RBP18.41■□□□□ 0.54
RAB40C-209ENST00000565511 VCXQ9H320 206 aa18.41■□□□□ 0.54
RAB40C-209ENST00000565511 DUSP21Q9H596 190 aa18.41■□□□□ 0.54
RAB40C-209ENST00000565511 VSIG4Q9Y279 399 aa18.41■□□□□ 0.54
RAB40C-209ENST00000565511 RRHO14718 337 aa18.4■□□□□ 0.54
RAB40C-209ENST00000565511 RAB29O14966 203 aa18.4■□□□□ 0.54
RAB40C-209ENST00000565511 HSMCR30P0CW71 290 aa18.4■□□□□ 0.54
RAB40C-209ENST00000565511 MAP2K4P45985 399 aa18.4■□□□□ 0.54
RAB40C-209ENST00000565511 CRIP2P52943 208 aaPredicted RBP18.4■□□□□ 0.54
RAB40C-209ENST00000565511 CX3CL1P78423 397 aa18.4■□□□□ 0.54
RAB40C-209ENST00000565511 ARHGAP5-AS1Q96IT6 56 aa18.4■□□□□ 0.54
RAB40C-209ENST00000565511 CHCHD6Q9BRQ6 235 aa18.4■□□□□ 0.54
RAB40C-209ENST00000565511 SCN3BQ9NY72 215 aa18.4■□□□□ 0.54
RAB40C-209ENST00000565511 PIPOXQ9P0Z9 390 aa18.4■□□□□ 0.54
RAB40C-209ENST00000565511 KIAA1456Q9P272 454 aa18.4■□□□□ 0.54
RAB40C-209ENST00000565511 A3GALT2U3KPV4 340 aa18.4■□□□□ 0.54
RAB40C-209ENST00000565511 ZNF616Q08AN1 781 aa18.39■□□□□ 0.53
RAB40C-209ENST00000565511 TMEM65Q6PI78 240 aa18.39■□□□□ 0.53
RAB40C-209ENST00000565511 DRAXINQ8NBI3 349 aaPredicted RBP18.39■□□□□ 0.53
RAB40C-209ENST00000565511 PLGRKTQ9HBL7 147 aa18.39■□□□□ 0.53
RAB40C-209ENST00000565511 Q9N2K0 584 aa18.39■□□□□ 0.53
RAB40C-209ENST00000565511 RNF150Q9ULK6 438 aa18.39■□□□□ 0.53
RAB40C-209ENST00000565511 A0A1W2PN81 502 aa18.38■□□□□ 0.53
RAB40C-209ENST00000565511 ARSBP15848 533 aa18.38■□□□□ 0.53
RAB40C-209ENST00000565511 CHRNA7P36544 502 aa18.38■□□□□ 0.53
RAB40C-209ENST00000565511 VEGFCP49767 419 aa18.38■□□□□ 0.53
RAB40C-209ENST00000565511 FABP5Q01469 135 aa18.38■□□□□ 0.53
RAB40C-209ENST00000565511 PLAC9Q5JTB6 97 aa18.38■□□□□ 0.53
RAB40C-209ENST00000565511 OR5AN1Q8NGI8 311 aa18.38■□□□□ 0.53
RAB40C-209ENST00000565511 DCUN1D4Q92564 292 aa18.38■□□□□ 0.53
RAB40C-209ENST00000565511 FAM103A1Q9BTL3 118 aaKnown RBP18.38■□□□□ 0.53
RAB40C-209ENST00000565511 PECRQ9BY49 303 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms