RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 RAB29O14966 203 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 BET1O15155 118 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 FGF16O43320 207 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 TMEM127O75204 238 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 FBXO24O75426 580 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 AMY1AP04745 511 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 AMY2AP04746 511 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 GSTP1P09211 210 aaKnown RBP7.91□□□□□ -1.14
CDH1-206ENST00000564676 GSTT2P0CG29 244 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 GSTT2BP0CG30 244 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 SAA2P0DJI9 122 aaPredicted RBP7.91□□□□□ -1.14
CDH1-206ENST00000564676 SMIM18P0DKX4 95 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 RPS19P39019 145 aaKnown RBP7.91□□□□□ -1.14
CDH1-206ENST00000564676 SERPINB10P48595 397 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 SCAND1P57086 179 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 GNG2P59768 71 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 LSAMPQ13449 338 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 ZNF833PQ6ZTB9 187 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 CENPVQ7Z7K6 275 aaPredicted RBP7.91□□□□□ -1.14
CDH1-206ENST00000564676 C5orf56Q8N8D9 126 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 OR4A4PQ8NGN8 299 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 ABHD14BQ96IU4 210 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 MRPL20Q9BYC9 149 aaKnown RBP7.91□□□□□ -1.14
CDH1-206ENST00000564676 PARP12Q9H0J9 701 aaKnown RBP7.91□□□□□ -1.14
CDH1-206ENST00000564676 C11orf54Q9H0W9 315 aaPredicted RBP7.91□□□□□ -1.14
CDH1-206ENST00000564676 IFI27L2Q9H2X8 130 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 ELF5Q9UKW6 265 aaPredicted RBP7.91□□□□□ -1.14
CDH1-206ENST00000564676 RNF150Q9ULK6 438 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 SPATA2Q9UM82 520 aa7.91□□□□□ -1.14
CDH1-206ENST00000564676 TET2Q6N021 2002 aaPredicted RBP7.91□□□□□ -1.14
CDH1-206ENST00000564676 TRAV18A0A075B6X5 111 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 IGKV1-6A0A0C4DH72 117 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 TMEM235A6NFC5 223 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 DTYMKP23919 212 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 NCS1P62166 190 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 PITPNAQ00169 270 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 PNLIPRP3Q17RR3 467 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 ZNF260Q3ZCT1 412 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 RPL39P5Q59GN2 51 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 IGSF11Q5DX21 431 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 HACD4Q5VWC8 232 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 HIST2H2BDQ6DRA6 164 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 FAM71F2Q6NXP2 309 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 Q8N6K4 173 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 OR13F1Q8NGS4 319 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 OR10J5Q8NHC4 309 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 NABP2Q9BQ15 211 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 ST6GALNAC5Q9BVH7 336 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 MRPS26Q9BYN8 205 aaKnown RBP7.9□□□□□ -1.14
CDH1-206ENST00000564676 WNT10AQ9GZT5 417 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 GHITMQ9H3K2 345 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.9□□□□□ -1.14
CDH1-206ENST00000564676 DIABLOQ9NR28 239 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 RDH8Q9NYR8 311 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 ZNF221Q9UK13 617 aa7.9□□□□□ -1.14
CDH1-206ENST00000564676 RBM7Q9Y580 266 aaKnown RBP7.9□□□□□ -1.14
CDH1-206ENST00000564676 A0A0A6YYH2 397 aa7.89□□□□□ -1.15
CDH1-206ENST00000564676 A6NJ64 397 aa7.89□□□□□ -1.15
CDH1-206ENST00000564676 CSF1P09603 554 aa7.89□□□□□ -1.15
CDH1-206ENST00000564676 CD28P10747 220 aa7.89□□□□□ -1.15
CDH1-206ENST00000564676 GPR12P47775 334 aa7.89□□□□□ -1.15
CDH1-206ENST00000564676 VBP1P61758 197 aa7.89□□□□□ -1.15
CDH1-206ENST00000564676 SRSF7Q16629 238 aaKnown RBP eCLIP7.89□□□□□ -1.15
CDH1-206ENST00000564676 C2orf68Q2NKX9 166 aa7.89□□□□□ -1.15
CDH1-206ENST00000564676 Q8N9W7 124 aa7.89□□□□□ -1.15
CDH1-206ENST00000564676 OR5AU1Q8NGC0 362 aa7.89□□□□□ -1.15
CDH1-206ENST00000564676 OR8H1Q8NGG4 311 aa7.89□□□□□ -1.15
CDH1-206ENST00000564676 NUDCD2Q8WVJ2 157 aa7.89□□□□□ -1.15
CDH1-206ENST00000564676 SLC25A38Q96DW6 304 aa7.89□□□□□ -1.15
CDH1-206ENST00000564676 RBMXL1Q96E39 390 aaKnown RBP7.89□□□□□ -1.15
CDH1-206ENST00000564676 RASL11BQ9BPW5 248 aa7.89□□□□□ -1.15
CDH1-206ENST00000564676 ZNF251Q9BRH9 671 aa7.89□□□□□ -1.15
CDH1-206ENST00000564676 GINS4Q9BRT9 223 aa7.89□□□□□ -1.15
CDH1-206ENST00000564676 AGMATQ9BSE5 352 aa7.89□□□□□ -1.15
CDH1-206ENST00000564676 CABLES2Q9BTV7 478 aa7.89□□□□□ -1.15
CDH1-206ENST00000564676 IGKV1D-8A0A087WSZ0 117 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 TRBV6-7A0A0A0MS04 114 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 DIRAS3O95661 229 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 OR8U9P0C7N5 309 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 CT45A6P0DMU7 189 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 CT45A5P0DMU8 189 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 CT45A7P0DMV0 189 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 F2RL1P55085 397 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 ACTBP60709 375 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 MMDQ15546 238 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 NSUN5P1Q3KNT7 163 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 FAM131AQ6UXB0 335 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 GLDNQ6ZMI3 551 aaPredicted RBP7.88□□□□□ -1.15
CDH1-206ENST00000564676 Q6ZS49 121 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 GPR141Q7Z602 305 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 SLC35E3Q7Z769 313 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 ANKRD13BQ86YJ7 626 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 FOXRED2Q8IWF2 684 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 OR8U1Q8NH10 309 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 FAM110DQ8TAY7 271 aaPredicted RBP7.88□□□□□ -1.15
CDH1-206ENST00000564676 SLC25A46Q96AG3 418 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 S100A16Q96FQ6 103 aaKnown RBP7.88□□□□□ -1.15
CDH1-206ENST00000564676 CITED2Q99967 270 aaPredicted RBP7.88□□□□□ -1.15
CDH1-206ENST00000564676 TOLLIPQ9H0E2 274 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 DCSTAMPQ9H295 470 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms