RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 MAGEA2P43356 314 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 MTPNP58546 118 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 RPS24P62847 133 aaKnown RBP2.63□□□□□ -1.99
LINC00560-201ENST00000564593 IL5RAQ01344 420 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 C1DQ13901 141 aaKnown RBP2.63□□□□□ -1.99
LINC00560-201ENST00000564593 C18orf21Q32NC0 220 aaPredicted RBP2.63□□□□□ -1.99
LINC00560-201ENST00000564593 KDM4DQ6B0I6 523 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 NIPAL1Q6NVV3 410 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 C22orf39Q6P5X5 142 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 IGFL1Q6UW32 110 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 FAM151BQ6UXP7 276 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 CYHR1Q6ZMK1 362 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 PAGE2Q7Z2X7 111 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 LINC00471Q8N535 108 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 TBC1D19Q8N5T2 526 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 OR8J2Q8NGG1 315 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 GTF2H4Q92759 462 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 RMI2Q96E14 147 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 PYURFQ96I23 114 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 Q96MT0 163 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 GABRG3Q99928 467 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 TM6SF2Q9BZW4 377 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 PCBD2Q9H0N5 130 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 KIR3DX1Q9H7L2 352 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 FAIMQ9NVQ4 179 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 ENPP5Q9UJA9 477 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 FLVCR2Q9UPI3 526 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 HS3ST2Q9Y278 367 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 CFL2Q9Y281 166 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 POFUT2Q9Y2G5 429 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 RBMX2Q9Y388 322 aaKnown RBP2.63□□□□□ -1.99
LINC00560-201ENST00000564593 RNF11Q9Y3C5 154 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 SAMHD1Q9Y3Z3 626 aaKnown RBP2.63□□□□□ -1.99
LINC00560-201ENST00000564593 FAM32AQ9Y421 112 aaKnown RBP2.63□□□□□ -1.99
LINC00560-201ENST00000564593 TIMM22Q9Y584 194 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 DOCK6Q96HP0 2047 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 UNC79Q9P2D8 2635 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 LOC100130705A0A1B0GUX0 176 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 GNG14A0A1W2PPG7 69 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 EFCAB10A6NFE3 127 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 CLDN24A6NM45 220 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 C5orf58C9J3I9 102 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 H3BSA7 217 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 CCL22O00626 93 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 MYL12BO14950 172 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 ACOX3O15254 700 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 SNAP29O95721 258 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 ZNF682O95780 498 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 SERPINA1P01009 418 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 GCGP01275 180 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 CCNOP22674 350 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 CXCR1P25024 350 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 CD40LGP29965 261 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 IFNGR2P38484 337 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 FOXA1P55317 472 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 CDC42P60953 191 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 SHHQ15465 462 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 VAMP3Q15836 100 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 CPTPQ5TA50 214 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 FAM222AQ5U5X8 452 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 SDHAF4Q5VUM1 108 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 NOXRED1Q6NXP6 359 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 MED27Q6P2C8 311 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 TMEM105Q8N8V8 129 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 TET1Q8NFU7 2136 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 OR10A6Q8NH74 314 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 OR1S1Q8NH92 325 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 CPNE4Q96A23 557 aaPredicted RBP2.62□□□□□ -1.99
LINC00560-201ENST00000564593 DCUN1D5Q9BTE7 237 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 BBS2Q9BXC9 721 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 CCDC90BQ9GZT6 254 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 ARV1Q9H2C2 271 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 TMEM100Q9NV29 134 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 VPS29Q9UBQ0 182 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 PPIL1Q9Y3C6 166 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 V9GYQ6 96 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 ALPK3Q96L96 1907 aa2.62□□□□□ -1.99
LINC00560-201ENST00000564593 IGHV1-3A0A0C4DH29 117 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 LOC730098B7Z3J9 87 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 OR1I1O60431 355 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 CDRT1O95170 752 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 IGLV2-8P01709 118 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 HMGA1P17096 107 aaKnown RBP2.61□□□□□ -1.99
LINC00560-201ENST00000564593 GPX2P18283 190 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 PSMB9P28065 219 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 PSMB5P28074 263 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 SPINT3P49223 89 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 ATP5J2P56134 94 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 OR4D2P58180 307 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 SLC35A1P78382 337 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 SLC35B1P78383 322 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 PMS2P3Q13401 168 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 PSG3Q16557 428 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 NDUFA5Q16718 116 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 ZNF181Q2M3W8 571 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 RPS27LQ71UM5 84 aaKnown RBP2.61□□□□□ -1.99
LINC00560-201ENST00000564593 CALHM3Q86XJ0 350 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 RBM45Q8IUH3 476 aaKnown RBP2.61□□□□□ -1.99
LINC00560-201ENST00000564593 ZNF101Q8IZC7 436 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 BPIFB6Q8NFQ5 453 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms