RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 SCGB1A1P11684 91 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 COX4I1P13073 169 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 GTF2F2P13984 249 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 NCK1P16333 377 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 TBPP20226 339 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 HIST1H1TP22492 207 aaPredicted RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 CMA1P23946 247 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 HTR2CP28335 458 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 RPA3P35244 121 aaPredicted RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 CEACAM3P40198 252 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 MYCNOSP40205 109 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 RPL13AP40429 203 aaKnown RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 RBM34P42696 430 aaKnown RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 GSSP48637 474 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 RPL14P50914 215 aaKnown RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 CCR6P51684 374 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 ATP1B3P54709 279 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 UGT2B15P54855 530 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 TAS2R60P59551 318 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 OR2B8PP59922 312 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 PSME3P61289 254 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 ERVS71-1P61550 626 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 MRPS22P82650 360 aaKnown RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 RPL19P84098 196 aaKnown RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 TGFBR3Q03167 851 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 TNFRSF9Q07011 255 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 ST3GAL3Q11203 375 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 BNIP2Q12982 314 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 PNOCQ13519 176 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 RAB31Q13636 194 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 TRAM2Q15035 370 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 ARL6IP1Q15041 203 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 PSG5Q15238 335 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 TRIP13Q15645 432 aaPredicted RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 GABRA6Q16445 453 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 RFX4Q33E94 735 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 TMEM176BQ3YBM2 270 aaPredicted RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 DEFB134Q4QY38 66 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 TMEM155Q4W5P6 130 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 SOHLH1Q5JUK2 328 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 SAMD4BQ5PRF9 694 aaKnown RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 LIPKQ5VXJ0 399 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 SLX4IPQ5VYV7 408 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 FBXW9Q5XUX1 488 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 FAM45BPQ6NSW5 357 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 REEP3Q6NUK4 255 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 DNM1P34Q6PK57 102 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 IGFL1Q6UW32 110 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 ZNF836Q6ZNA1 936 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 ZNF621Q6ZSS3 439 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 AHSA2Q719I0 299 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 SLC16A14Q7RTX9 510 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 APTXQ7Z2E3 356 aaKnown RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 OR2W3Q7Z3T1 314 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 PPP1R27Q86WC6 154 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 DHFR2Q86XF0 187 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 CALHM3Q86XJ0 350 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 PHF13Q86YI8 300 aaPredicted RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 CALHM1Q8IU99 346 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 PDZD9Q8IXQ8 264 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 BOD1L2Q8IYS8 172 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 HS3ST5Q8IZT8 346 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 ZFP82Q8N141 532 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 Q8N2B8 174 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 ZCCHC24Q8N2G6 241 aaKnown RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 STPG2Q8N412 459 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 STX19Q8N4C7 294 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 ATPAF2Q8N5M1 289 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 PXT1Q8NFP0 134 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 OR10A7Q8NGE5 316 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 OR51D1Q8NGF3 324 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 OR5L1Q8NGL2 311 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 OR4D5Q8NGN0 318 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 OR51A7Q8NH64 312 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 LHFPL5Q8TAF8 219 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 PIGXQ8TBF5 258 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 FAM45AQ8TCE6 357 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 MAGEE2Q8TD90 523 aaPredicted RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 TCP10LQ8TDR4 215 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 APH1BQ8WW43 257 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 TMEM37Q8WXS4 190 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 RPL3LQ92901 407 aaKnown RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 STMN2Q93045 179 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 PTH2Q96A98 100 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 C12orf43Q96C57 262 aaKnown RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 DGCR14Q96DF8 476 aaKnown RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 SGTBQ96EQ0 304 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 IMP4Q96G21 291 aaKnown RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 FOPNLQ96NB1 174 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 PRAP1Q96NZ9 151 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 SLC35A5Q9BS91 424 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 OSBPL11Q9BXB4 747 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 CDCA4Q9BXL8 241 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 MAP1LC3CQ9BXW4 147 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 ZNF717Q9BY31 904 aaPredicted RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 ALX4Q9H161 411 aaPredicted RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 SLC25A51Q9H1U9 297 aa1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 DHX35Q9H5Z1 703 aaKnown RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 WDR55Q9H6Y2 383 aaPredicted RBP1.24□□□□□ -2.21
SUB1P3-201ENST00000564581 KAT8Q9H7Z6 458 aaKnown RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms