RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 PECRQ9BY49 303 aa1.79□□□□□ -2.12
UBR1-205ENST00000564540 VCX3BQ9H321 246 aa1.79□□□□□ -2.12
UBR1-205ENST00000564540 LINC00527Q9UJ94 153 aa1.79□□□□□ -2.12
UBR1-205ENST00000564540 HDGFL3Q9Y3E1 203 aa1.79□□□□□ -2.12
UBR1-205ENST00000564540 SAMHD1Q9Y3Z3 626 aaKnown RBP1.79□□□□□ -2.12
UBR1-205ENST00000564540 FLT4P35916 1363 aa1.79□□□□□ -2.12
UBR1-205ENST00000564540 CHD2O14647 1828 aaKnown RBP1.79□□□□□ -2.12
UBR1-205ENST00000564540 SORL1Q92673 2214 aa1.79□□□□□ -2.12
UBR1-205ENST00000564540 TTC21AQ8NDW8 1320 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 CLDN24A6NM45 220 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 FADS1O60427 444 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 KRT75O95678 551 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 OR4A8P0C604 315 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 MYL12AP19105 171 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 NTF3P20783 257 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 S100A2P29034 98 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 INPP1P49441 399 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 PSMB3P49720 205 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 GNG10P50151 68 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 SULT1A1P50225 295 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 RPS24P62847 133 aaKnown RBP1.78□□□□□ -2.12
UBR1-205ENST00000564540 TMEM267Q0VDI3 215 aaPredicted RBP1.78□□□□□ -2.12
UBR1-205ENST00000564540 JOSD1Q15040 202 aaPredicted RBP1.78□□□□□ -2.12
UBR1-205ENST00000564540 HIST3H3Q16695 136 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 TTMPQ5BVD1 217 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 FAM104BQ5XKR9 115 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 LCN8Q6JVE9 175 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 SMARCD3Q6STE5 483 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 TCF23Q7RTU1 214 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 NT5DC3Q86UY8 548 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 LRRC25Q8N386 305 aaPredicted RBP1.78□□□□□ -2.12
UBR1-205ENST00000564540 CLDN22Q8N7P3 220 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 OR51D1Q8NGF3 324 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 OR8S1Q8NH09 359 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 MFSD8Q8NHS3 518 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 C2orf15Q8WU43 125 aaKnown RBP1.78□□□□□ -2.12
UBR1-205ENST00000564540 ITLN2Q8WWU7 325 aaPredicted RBP1.78□□□□□ -2.12
UBR1-205ENST00000564540 APOBEC3DQ96AK3 386 aaPredicted RBP1.78□□□□□ -2.12
UBR1-205ENST00000564540 ACY3Q96HD9 319 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 OR7D2Q96RA2 312 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 TSSK6Q9BXA6 273 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 FAM60AQ9NP50 221 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 VPS29Q9UBQ0 182 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 ATPIF1Q9UII2 106 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 RWDD2AQ9UIY3 292 aa1.78□□□□□ -2.12
UBR1-205ENST00000564540 LSM5Q9Y4Y9 91 aaKnown RBP1.78□□□□□ -2.12
UBR1-205ENST00000564540 LOXHD1Q8IVV2 1947 aa1.78□□□□□ -2.13
UBR1-205ENST00000564540 NPATQ14207 1427 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 IGHV3-43A0A0B4J1X8 118 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 IZUMO1RA6ND01 250 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 ARGFXA6NJG6 315 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 K7EQS6 105 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 COPEO14579 308 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 RGS5O15539 181 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 OR7C2O60412 319 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 POP7O75817 140 aaKnown RBP1.77□□□□□ -2.13
UBR1-205ENST00000564540 SERPINA1P01009 418 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 LTAP01374 205 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 OR5AC1P0C628 307 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 OR13C7P0DN81 318 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 HRES1P13985 223 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 CD36P16671 472 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 PRPS1L1P21108 318 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 G0S2P27469 103 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 MPIP34949 423 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 CTBP2P56545 445 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 RAB5BP61020 215 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 TNFRSF9Q07011 255 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 BTN1A1Q13410 526 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 CASP8Q14790 479 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 TMED2Q15363 201 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 C1orf194Q5T5A4 169 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 N4BP2L1Q5TBK1 243 aaPredicted RBP1.77□□□□□ -2.13
UBR1-205ENST00000564540 EBLN2Q6P2I7 272 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 CYHR1Q6ZMK1 362 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 CCDC121Q6ZUS5 278 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 ATP5L2Q7Z4Y8 100 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 SLC51BQ86UW2 128 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 STX12Q86Y82 276 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 SGPP2Q8IWX5 399 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 ZNF567Q8N184 647 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 ZFP62Q8NB50 900 aaPredicted RBP1.77□□□□□ -2.13
UBR1-205ENST00000564540 OR8A1Q8NGG7 326 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 EBNA1BP2Q99848 306 aaKnown RBP1.77□□□□□ -2.13
UBR1-205ENST00000564540 GTSF1LQ9H1H1 148 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 TLNRD1Q9H1K6 362 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 TXNIPQ9H3M7 391 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 LINC00574Q9H8X3 128 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 IL37Q9NZH6 218 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 ZNF492Q9P255 531 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 PRELID1Q9Y255 219 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 PLXNB3Q9ULL4 1909 aa1.77□□□□□ -2.13
UBR1-205ENST00000564540 PRR14LQ5THK1 2151 aa1.76□□□□□ -2.13
UBR1-205ENST00000564540 PLCH2O75038 1416 aa1.76□□□□□ -2.13
UBR1-205ENST00000564540 A0A087WUJ7 227 aa1.76□□□□□ -2.13
UBR1-205ENST00000564540 C4orf51C9J302 202 aa1.76□□□□□ -2.13
UBR1-205ENST00000564540 TMEM238C9JI98 176 aa1.76□□□□□ -2.13
UBR1-205ENST00000564540 F5H5P2 479 aa1.76□□□□□ -2.13
UBR1-205ENST00000564540 CHP2O43745 196 aa1.76□□□□□ -2.13
UBR1-205ENST00000564540 CNIH1O95406 144 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms