RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 DUSP21Q9H596 190 aa11.72□□□□□ -0.53
SPG7-210ENST00000564409 VSIG4Q9Y279 399 aa11.72□□□□□ -0.53
SPG7-210ENST00000564409 SORL1Q92673 2214 aa11.71□□□□□ -0.53
SPG7-210ENST00000564409 TRAV41A0A0B4J266 112 aa11.71□□□□□ -0.53
SPG7-210ENST00000564409 OR8U8P0C7N1 319 aa11.71□□□□□ -0.53
SPG7-210ENST00000564409 ARSBP15848 533 aa11.71□□□□□ -0.53
SPG7-210ENST00000564409 MYF6P23409 242 aa11.71□□□□□ -0.53
SPG7-210ENST00000564409 ZBTB25P24278 435 aa11.71□□□□□ -0.53
SPG7-210ENST00000564409 OR3A3P47888 321 aa11.71□□□□□ -0.53
SPG7-210ENST00000564409 PSMD7P51665 324 aa11.71□□□□□ -0.53
SPG7-210ENST00000564409 DEFB136Q30KP8 78 aa11.71□□□□□ -0.53
SPG7-210ENST00000564409 LIPKQ5VXJ0 399 aa11.71□□□□□ -0.53
SPG7-210ENST00000564409 ZNF660Q6AZW8 331 aaPredicted RBP11.71□□□□□ -0.53
SPG7-210ENST00000564409 TCTEX1D1Q8N7M0 179 aa11.71□□□□□ -0.53
SPG7-210ENST00000564409 ZNF491Q8N8L2 437 aa11.71□□□□□ -0.53
SPG7-210ENST00000564409 NICN1Q9BSH3 213 aa11.71□□□□□ -0.53
SPG7-210ENST00000564409 ANKRD60Q9BZ19 345 aa11.71□□□□□ -0.53
SPG7-210ENST00000564409 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.71□□□□□ -0.53
SPG7-210ENST00000564409 IGHV7-81A0A0B4J1V7 117 aa11.7□□□□□ -0.54
SPG7-210ENST00000564409 NHLRC4P0CG21 123 aaPredicted RBP11.7□□□□□ -0.54
SPG7-210ENST00000564409 CRIP2P52943 208 aaPredicted RBP11.7□□□□□ -0.54
SPG7-210ENST00000564409 MINDY2Q8NBR6 621 aa11.7□□□□□ -0.54
SPG7-210ENST00000564409 LPAR5Q9H1C0 372 aa11.7□□□□□ -0.54
SPG7-210ENST00000564409 PLGRKTQ9HBL7 147 aa11.7□□□□□ -0.54
SPG7-210ENST00000564409 PARP11Q9NR21 331 aa11.7□□□□□ -0.54
SPG7-210ENST00000564409 SEC14L6B5MCN3 397 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 I3L521 148 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 RRHO14718 337 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 ATP6V0E1O15342 81 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 HSPA12AO43301 675 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 RGS10O43665 173 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 CPEP16870 476 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 RAB9AP51151 201 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 ZNF616Q08AN1 781 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 TMEM267Q0VDI3 215 aaPredicted RBP11.69□□□□□ -0.54
SPG7-210ENST00000564409 MLLT11Q13015 90 aaPredicted RBP11.69□□□□□ -0.54
SPG7-210ENST00000564409 KIAA0141Q14154 515 aaPredicted RBP11.69□□□□□ -0.54
SPG7-210ENST00000564409 TMEM91Q6ZNR0 172 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 OR11H1Q8NG94 326 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 OR5AN1Q8NGI8 311 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 SETD6Q8TBK2 473 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 PTX4Q96A99 478 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 RITA1Q96K30 269 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 AGMATQ9BSE5 352 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 ACOT13Q9NPJ3 140 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 C12orf4Q9NQ89 552 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 AK3Q9UIJ7 227 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 RNF150Q9ULK6 438 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 WASHC3Q9Y3C0 194 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 WSB1Q9Y6I7 421 aa11.69□□□□□ -0.54
SPG7-210ENST00000564409 G3V318 75 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 ST8SIA5O15466 376 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 SOCS1O15524 211 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 GSTP1P09211 210 aaKnown RBP11.68□□□□□ -0.54
SPG7-210ENST00000564409 HSMCR30P0CW71 290 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 CT45A6P0DMU7 189 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 CT45A5P0DMU8 189 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 CT45A7P0DMV0 189 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 CNTFRP26992 372 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 HLA-DRB3P79483 266 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 RAB11BQ15907 218 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 PYHIN1Q6K0P9 492 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 FAM131AQ6UXB0 335 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 PRSS48Q7RTY5 328 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 C5orf24Q7Z6I8 188 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 OR56B1Q8NGI3 324 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 OR1N2Q8NGR9 330 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 TMEM203Q969S6 136 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 KLK15Q9H2R5 256 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 VCX3BQ9H321 246 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 Q9N2K0 584 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 SCOCQ9UIL1 159 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 COL7A1Q02388 2944 aa11.68□□□□□ -0.54
SPG7-210ENST00000564409 A0A0A6YYD4 124 aa11.67□□□□□ -0.54
SPG7-210ENST00000564409 FOXI3A8MTJ6 420 aaPredicted RBP11.67□□□□□ -0.54
SPG7-210ENST00000564409 H0YJW9 148 aa11.67□□□□□ -0.54
SPG7-210ENST00000564409 H7C2Y5 167 aa11.67□□□□□ -0.54
SPG7-210ENST00000564409 ARPC1BO15143 372 aaKnown RBP11.67□□□□□ -0.54
SPG7-210ENST00000564409 CEACAM6P40199 344 aa11.67□□□□□ -0.54
SPG7-210ENST00000564409 SERPINB10P48595 397 aa11.67□□□□□ -0.54
SPG7-210ENST00000564409 LUMP51884 338 aaPredicted RBP11.67□□□□□ -0.54
SPG7-210ENST00000564409 AQP4P55087 323 aa11.67□□□□□ -0.54
SPG7-210ENST00000564409 PLGLAQ15195 96 aa11.67□□□□□ -0.54
SPG7-210ENST00000564409 P2RY14Q15391 338 aa11.67□□□□□ -0.54
SPG7-210ENST00000564409 C19orf54Q5BKX5 351 aa11.67□□□□□ -0.54
SPG7-210ENST00000564409 CD200R1LQ6Q8B3 271 aa11.67□□□□□ -0.54
SPG7-210ENST00000564409 CYYR1Q96J86 154 aa11.67□□□□□ -0.54
SPG7-210ENST00000564409 WWC2-AS2Q96NR7 200 aa11.67□□□□□ -0.54
SPG7-210ENST00000564409 C11orf54Q9H0W9 315 aaPredicted RBP11.67□□□□□ -0.54
SPG7-210ENST00000564409 KCNK15Q9H427 330 aa11.67□□□□□ -0.54
SPG7-210ENST00000564409 NKX1-2Q9UD57 310 aaPredicted RBP11.67□□□□□ -0.54
SPG7-210ENST00000564409 ZNF221Q9UK13 617 aa11.67□□□□□ -0.54
SPG7-210ENST00000564409 FOXA2Q9Y261 457 aaPredicted RBP11.67□□□□□ -0.54
SPG7-210ENST00000564409 LSM4Q9Y4Z0 139 aaKnown RBP11.67□□□□□ -0.54
SPG7-210ENST00000564409 NUBP2Q9Y5Y2 271 aa11.67□□□□□ -0.54
SPG7-210ENST00000564409 V9GY05 133 aa11.67□□□□□ -0.54
SPG7-210ENST00000564409 SPDEFO95238 335 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 DIRAS3O95661 229 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 CRHBPP24387 322 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 ECI1P42126 302 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms