RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 OR1A1Q9P1Q5 309 aa13.85□□□□□ -0.19
NME3-205ENST00000563854 KIAA1456Q9P272 454 aa13.85□□□□□ -0.19
NME3-205ENST00000563854 ATP6V0E1O15342 81 aa13.84□□□□□ -0.19
NME3-205ENST00000563854 IGHG4P01861 327 aa13.84□□□□□ -0.19
NME3-205ENST00000563854 OR5H8P0DN80 308 aa13.84□□□□□ -0.19
NME3-205ENST00000563854 HLA-DRB3P79483 266 aa13.84□□□□□ -0.19
NME3-205ENST00000563854 CFHR3Q02985 330 aa13.84□□□□□ -0.19
NME3-205ENST00000563854 EGFEM1PQ0D2K5 195 aa13.84□□□□□ -0.19
NME3-205ENST00000563854 ZNF880Q6PDB4 577 aa13.84□□□□□ -0.19
NME3-205ENST00000563854 GLDNQ6ZMI3 551 aaPredicted RBP13.84□□□□□ -0.19
NME3-205ENST00000563854 ABHD14BQ96IU4 210 aa13.84□□□□□ -0.19
NME3-205ENST00000563854 PIPOXQ9P0Z9 390 aa13.84□□□□□ -0.19
NME3-205ENST00000563854 G3V318 75 aa13.83□□□□□ -0.2
NME3-205ENST00000563854 RAB29O14966 203 aa13.83□□□□□ -0.2
NME3-205ENST00000563854 IGF1P05019 195 aa13.83□□□□□ -0.2
NME3-205ENST00000563854 PLGLAQ15195 96 aa13.83□□□□□ -0.2
NME3-205ENST00000563854 C5orf64Q2M2E5 130 aa13.83□□□□□ -0.2
NME3-205ENST00000563854 LY6G6FQ5SQ64 297 aa13.83□□□□□ -0.2
NME3-205ENST00000563854 HES5Q5TA89 166 aa13.83□□□□□ -0.2
NME3-205ENST00000563854 TMEM65Q6PI78 240 aa13.83□□□□□ -0.2
NME3-205ENST00000563854 ARHGAP5-AS1Q96IT6 56 aa13.83□□□□□ -0.2
NME3-205ENST00000563854 PECRQ9BY49 303 aa13.83□□□□□ -0.2
NME3-205ENST00000563854 OR51J1Q9H342 316 aa13.83□□□□□ -0.2
NME3-205ENST00000563854 RIMS4Q9H426 269 aaPredicted RBP13.83□□□□□ -0.2
NME3-205ENST00000563854 C12orf4Q9NQ89 552 aa13.83□□□□□ -0.2
NME3-205ENST00000563854 IGHV7-81A0A0B4J1V7 117 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 H7C2Y5 167 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 HLA-DRB1P01911 266 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 CD37P11049 281 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 CEACAM6P40199 344 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 CDX1P47902 265 aaPredicted RBP13.82□□□□□ -0.2
NME3-205ENST00000563854 HSPA13P48723 471 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 LUMP51884 338 aaPredicted RBP13.82□□□□□ -0.2
NME3-205ENST00000563854 ECSCRQ19T08 205 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 LIN54Q6MZP7 749 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 FAM71F2Q6NXP2 309 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 RNF152Q8N8N0 203 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 OR5M8Q8NGP6 311 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 ABHD5Q8WTS1 349 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 C4orf3Q8WVX3 66 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 FAM3DQ96BQ1 224 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 OR5B12Q96R08 314 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 CMSS1Q9BQ75 279 aaKnown RBP13.82□□□□□ -0.2
NME3-205ENST00000563854 FBXL15Q9H469 300 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 A3GALT2U3KPV4 340 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 V9GY05 133 aa13.82□□□□□ -0.2
NME3-205ENST00000563854 TRAV41A0A0B4J266 112 aa13.81□□□□□ -0.2
NME3-205ENST00000563854 DENRO43583 198 aaKnown RBP13.81□□□□□ -0.2
NME3-205ENST00000563854 GSTP1P09211 210 aaKnown RBP13.81□□□□□ -0.2
NME3-205ENST00000563854 SCTP09683 121 aa13.81□□□□□ -0.2
NME3-205ENST00000563854 ZBTB25P24278 435 aa13.81□□□□□ -0.2
NME3-205ENST00000563854 PSMB8P28062 276 aa13.81□□□□□ -0.2
NME3-205ENST00000563854 MRPS15P82914 257 aaKnown RBP13.81□□□□□ -0.2
NME3-205ENST00000563854 KIR2DS1Q14954 304 aa13.81□□□□□ -0.2
NME3-205ENST00000563854 TBCEQ15813 527 aaPredicted RBP13.81□□□□□ -0.2
NME3-205ENST00000563854 C2orf76Q3KRA6 126 aa13.81□□□□□ -0.2
NME3-205ENST00000563854 ZNF367Q7RTV3 350 aa13.81□□□□□ -0.2
NME3-205ENST00000563854 FAM89BQ8N5H3 189 aa13.81□□□□□ -0.2
NME3-205ENST00000563854 OR56B1Q8NGI3 324 aa13.81□□□□□ -0.2
NME3-205ENST00000563854 EDARADDQ8WWZ3 215 aa13.81□□□□□ -0.2
NME3-205ENST00000563854 KLK15Q9H2R5 256 aa13.81□□□□□ -0.2
NME3-205ENST00000563854 Q9N2K0 584 aa13.81□□□□□ -0.2
NME3-205ENST00000563854 ACOT13Q9NPJ3 140 aa13.81□□□□□ -0.2
NME3-205ENST00000563854 BLOC1S6Q9UL45 172 aa13.81□□□□□ -0.2
NME3-205ENST00000563854 RNF150Q9ULK6 438 aa13.81□□□□□ -0.2
NME3-205ENST00000563854 HSF4Q9ULV5 492 aa13.81□□□□□ -0.2
NME3-205ENST00000563854 MGAT4AQ9UM21 535 aa13.81□□□□□ -0.2
NME3-205ENST00000563854 TRBV6-6A0A0A6YYG2 114 aa13.8□□□□□ -0.2
NME3-205ENST00000563854 TMEM272A0A1B0GTI8 110 aa13.8□□□□□ -0.2
NME3-205ENST00000563854 FOXI3A8MTJ6 420 aaPredicted RBP13.8□□□□□ -0.2
NME3-205ENST00000563854 CT45A6P0DMU7 189 aa13.8□□□□□ -0.2
NME3-205ENST00000563854 CT45A5P0DMU8 189 aa13.8□□□□□ -0.2
NME3-205ENST00000563854 CT45A7P0DMV0 189 aa13.8□□□□□ -0.2
NME3-205ENST00000563854 TMEM50BP56557 158 aa13.8□□□□□ -0.2
NME3-205ENST00000563854 PLA2G7Q13093 441 aa13.8□□□□□ -0.2
NME3-205ENST00000563854 DRAXINQ8NBI3 349 aaPredicted RBP13.8□□□□□ -0.2
NME3-205ENST00000563854 NPBQ8NG41 125 aa13.8□□□□□ -0.2
NME3-205ENST00000563854 C11orf54Q9H0W9 315 aaPredicted RBP13.8□□□□□ -0.2
NME3-205ENST00000563854 GNB4Q9HAV0 340 aa13.8□□□□□ -0.2
NME3-205ENST00000563854 OR5H14A6NHG9 310 aa13.79□□□□□ -0.2
NME3-205ENST00000563854 H0YJW9 148 aa13.79□□□□□ -0.2
NME3-205ENST00000563854 RRHO14718 337 aa13.79□□□□□ -0.2
NME3-205ENST00000563854 NDUFA3O95167 84 aa13.79□□□□□ -0.2
NME3-205ENST00000563854 MYL9P24844 172 aa13.79□□□□□ -0.2
NME3-205ENST00000563854 OR10A3P58181 314 aa13.79□□□□□ -0.2
NME3-205ENST00000563854 DGCR2P98153 550 aa13.79□□□□□ -0.2
NME3-205ENST00000563854 NDPQ00604 133 aa13.79□□□□□ -0.2
NME3-205ENST00000563854 SSX1Q16384 188 aa13.79□□□□□ -0.2
NME3-205ENST00000563854 PLAC9Q5JTB6 97 aa13.79□□□□□ -0.2
NME3-205ENST00000563854 OR11H1Q8NG94 326 aa13.79□□□□□ -0.2
NME3-205ENST00000563854 CLCC1Q96S66 551 aa13.79□□□□□ -0.2
NME3-205ENST00000563854 ZNF221Q9UK13 617 aa13.79□□□□□ -0.2
NME3-205ENST00000563854 ZNF580Q9UK33 172 aa13.79□□□□□ -0.2
NME3-205ENST00000563854 WASHC3Q9Y3C0 194 aa13.79□□□□□ -0.2
NME3-205ENST00000563854 A0A075B6Q4 140 aa13.78□□□□□ -0.2
NME3-205ENST00000563854 A0A1W2PN81 502 aa13.78□□□□□ -0.2
NME3-205ENST00000563854 SEC14L6B5MCN3 397 aa13.78□□□□□ -0.2
NME3-205ENST00000563854 PDCD5O14737 125 aa13.78□□□□□ -0.2
NME3-205ENST00000563854 CD3GP09693 182 aa13.78□□□□□ -0.2
NME3-205ENST00000563854 PPIFP30405 207 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms