RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 FGFR1OP2Q9NVK5 253 aa0.95□□□□□ -2.26
HMGB1P33-201ENST00000563485 FAM206AQ9NX38 181 aa0.95□□□□□ -2.26
HMGB1P33-201ENST00000563485 POLR1DQ9Y2S0 133 aa0.95□□□□□ -2.26
HMGB1P33-201ENST00000563485 FIS1Q9Y3D6 152 aa0.95□□□□□ -2.26
HMGB1P33-201ENST00000563485 ZNF337Q9Y3M9 751 aa0.95□□□□□ -2.26
HMGB1P33-201ENST00000563485 DNMT1P26358 1616 aaKnown RBP0.95□□□□□ -2.26
HMGB1P33-201ENST00000563485 CEP170Q5SW79 1584 aa0.95□□□□□ -2.26
HMGB1P33-201ENST00000563485 DICER1Q9UPY3 1922 aaKnown RBP0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 IGKV1D-37A0A075B6S9 117 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 TRAV8-1A0A0A6YYK1 113 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 IGKV1-12A0A0C4DH73 117 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 A0A1B0GW54 56 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 SDHAF1A6NFY7 115 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 F5H5T6 163 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 H0Y980 276 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 PFDN6O15212 129 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 PSCAO43653 123 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 CPSF4O95639 269 aaKnown RBP0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 ATP6V1G2O95670 118 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 MT-CO2P00403 227 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 IGKV1D-12P01611 117 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 GYPCP04921 128 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 IL6P05231 212 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 IL3P08700 152 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 CD7P09564 240 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 NQO1P15559 274 aaKnown RBP0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 CTLA4P16410 223 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 UGT2B7P16662 529 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 FUSP35637 526 aaKnown RBP eCLIP0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 SLCO1A2P46721 670 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 NKX2-5P52952 324 aaPredicted RBP0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 AP2S1P53680 142 aaPredicted RBP0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 RAB5BP61020 215 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 HOXC5Q00444 222 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 BCL2A1Q16548 175 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 HIST3H3Q16695 136 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 TRMT12Q53H54 448 aaKnown RBP0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 SPATA31B1PQ5VZV4 182 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 CST9Q5W186 159 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 LPCAT4Q643R3 524 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 EBLN2Q6P2I7 272 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 C1orf158Q8N1D5 194 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 RIBC1Q8N443 379 aaPredicted RBP0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 ZNF565Q8N9K5 539 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 Q8NAQ8 132 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 OR4A5Q8NH83 315 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 ERMNQ8TAM6 284 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 MUC7Q8TAX7 377 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 C16orf78Q8WTQ4 265 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 CYGBQ8WWM9 190 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 TMBIM1Q969X1 311 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 MS4A6EQ96DS6 147 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 UPK3BQ9BT76 320 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 TMEM208Q9BTX3 173 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 MROQ9BYG7 248 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 ULBP1Q9BZM6 244 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 NKX6-2Q9C056 277 aaPredicted RBP0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 GABARAPL1Q9H0R8 117 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 C3orf18Q9UK00 162 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 BTRCQ9Y297 605 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 KLK5Q9Y337 293 aaPredicted RBP0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 MRPS16Q9Y3D3 137 aaKnown RBP0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 PHLDA3Q9Y5J5 127 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 ICOSQ9Y6W8 199 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 SSH2Q76I76 1423 aa0.94□□□□□ -2.26
HMGB1P33-201ENST00000563485 DHRS12A0PJE2 317 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 C5orf49A4QMS7 147 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 GGTLC3B5MD39 225 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 DISC1C4P0D8 188 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 M0QZ92 97 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 LECT2O14960 151 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 IFNA5P01569 189 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 IGHMP01871 453 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 TRGV3P03979 118 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 OR5G3P0C626 314 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 OR12D1P0DN82 309 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 ATP6V0CP27449 155 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 OR10J1P30954 320 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 LINC00313P59037 77 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 FKBP1AP62942 108 aaKnown RBP0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 CTAG1AP78358 180 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 FADDQ13158 208 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 UAP1Q16222 522 aaPredicted RBP0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 BATFQ16520 125 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 MAPK14Q16539 360 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 PLPPR5Q32ZL2 321 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 TMEM176BQ3YBM2 270 aaPredicted RBP0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 AKIRIN2Q53H80 203 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 MESTQ5EB52 335 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 N4BP2L1Q5TBK1 243 aaPredicted RBP0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 FAM78BQ5VT40 261 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 XKRXQ6PP77 449 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 DOLPP1Q86YN1 238 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 TMEM75Q8N9X5 138 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 LY6G5BQ8NDX9 201 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 TMEM161BQ8NDZ6 487 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 OR1M1Q8NGA1 313 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 OR2D3Q8NGH3 330 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 OR2V1Q8NHB1 315 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 RAB8BQ92930 207 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms