RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 VDAC2P45880 294 aaPredicted RBP13.18□□□□□ -0.3
CDT1-202ENST00000562747 SERPINB10P48595 397 aa13.18□□□□□ -0.3
CDT1-202ENST00000562747 PITPNAQ00169 270 aa13.18□□□□□ -0.3
CDT1-202ENST00000562747 C2orf68Q2NKX9 166 aa13.18□□□□□ -0.3
CDT1-202ENST00000562747 ZNF260Q3ZCT1 412 aa13.18□□□□□ -0.3
CDT1-202ENST00000562747 ABCA11PQ4W5N1 156 aa13.18□□□□□ -0.3
CDT1-202ENST00000562747 ARSJQ5FYB0 599 aaPredicted RBP13.18□□□□□ -0.3
CDT1-202ENST00000562747 HACD4Q5VWC8 232 aa13.18□□□□□ -0.3
CDT1-202ENST00000562747 Q6ZS46 218 aa13.18□□□□□ -0.3
CDT1-202ENST00000562747 Q6ZS49 121 aa13.18□□□□□ -0.3
CDT1-202ENST00000562747 ZNF833PQ6ZTB9 187 aa13.18□□□□□ -0.3
CDT1-202ENST00000562747 KLHDC1Q8N7A1 406 aa13.18□□□□□ -0.3
CDT1-202ENST00000562747 OR2T10Q8NGZ9 312 aa13.18□□□□□ -0.3
CDT1-202ENST00000562747 SLC25A38Q96DW6 304 aa13.18□□□□□ -0.3
CDT1-202ENST00000562747 CABLES2Q9BTV7 478 aa13.18□□□□□ -0.3
CDT1-202ENST00000562747 TOLLIPQ9H0E2 274 aa13.18□□□□□ -0.3
CDT1-202ENST00000562747 OR1A1Q9P1Q5 309 aa13.18□□□□□ -0.3
CDT1-202ENST00000562747 SAA2-SAA4A0A096LPE2 208 aa13.17□□□□□ -0.3
CDT1-202ENST00000562747 IGKV1-6A0A0C4DH72 117 aa13.17□□□□□ -0.3
CDT1-202ENST00000562747 RAB29O14966 203 aa13.17□□□□□ -0.3
CDT1-202ENST00000562747 ST8SIA5O15466 376 aa13.17□□□□□ -0.3
CDT1-202ENST00000562747 SAA2P0DJI9 122 aaPredicted RBP13.17□□□□□ -0.3
CDT1-202ENST00000562747 VSIG10L2P0DP72 767 aa13.17□□□□□ -0.3
CDT1-202ENST00000562747 HNF4GQ14541 408 aa13.17□□□□□ -0.3
CDT1-202ENST00000562747 HERPUD1Q15011 391 aa13.17□□□□□ -0.3
CDT1-202ENST00000562747 PNLIPRP3Q17RR3 467 aa13.17□□□□□ -0.3
CDT1-202ENST00000562747 ANKRD13BQ86YJ7 626 aa13.17□□□□□ -0.3
CDT1-202ENST00000562747 Q8N6K4 173 aa13.17□□□□□ -0.3
CDT1-202ENST00000562747 EAF1Q96JC9 268 aaPredicted RBP13.17□□□□□ -0.3
CDT1-202ENST00000562747 ZNF230Q9UIE0 474 aaPredicted RBP13.17□□□□□ -0.3
CDT1-202ENST00000562747 PEX14O75381 377 aa13.16□□□□□ -0.3
CDT1-202ENST00000562747 MOSP00540 346 aa13.16□□□□□ -0.3
CDT1-202ENST00000562747 CSF1P09603 554 aa13.16□□□□□ -0.3
CDT1-202ENST00000562747 GSTT2P0CG29 244 aa13.16□□□□□ -0.3
CDT1-202ENST00000562747 GSTT2BP0CG30 244 aa13.16□□□□□ -0.3
CDT1-202ENST00000562747 NCS1P62166 190 aa13.16□□□□□ -0.3
CDT1-202ENST00000562747 LSAMPQ13449 338 aa13.16□□□□□ -0.3
CDT1-202ENST00000562747 C5orf56Q8N8D9 126 aa13.16□□□□□ -0.3
CDT1-202ENST00000562747 OR8H1Q8NGG4 311 aa13.16□□□□□ -0.3
CDT1-202ENST00000562747 SLC25A46Q96AG3 418 aa13.16□□□□□ -0.3
CDT1-202ENST00000562747 S1PR3Q99500 378 aa13.16□□□□□ -0.3
CDT1-202ENST00000562747 NABP2Q9BQ15 211 aa13.16□□□□□ -0.3
CDT1-202ENST00000562747 AGMATQ9BSE5 352 aa13.16□□□□□ -0.3
CDT1-202ENST00000562747 WNT10AQ9GZT5 417 aa13.16□□□□□ -0.3
CDT1-202ENST00000562747 PARP12Q9H0J9 701 aaKnown RBP13.16□□□□□ -0.3
CDT1-202ENST00000562747 C11orf54Q9H0W9 315 aaPredicted RBP13.16□□□□□ -0.3
CDT1-202ENST00000562747 DCSTAMPQ9H295 470 aa13.16□□□□□ -0.3
CDT1-202ENST00000562747 DIABLOQ9NR28 239 aa13.16□□□□□ -0.3
CDT1-202ENST00000562747 ELF5Q9UKW6 265 aaPredicted RBP13.16□□□□□ -0.3
CDT1-202ENST00000562747 DNAH3Q8TD57 4116 aa13.15□□□□□ -0.3
CDT1-202ENST00000562747 TRBV6-7A0A0A0MS04 114 aa13.15□□□□□ -0.3
CDT1-202ENST00000562747 TMEM235A6NFC5 223 aa13.15□□□□□ -0.3
CDT1-202ENST00000562747 ZNF736B4DX44 427 aaPredicted RBP13.15□□□□□ -0.3
CDT1-202ENST00000562747 GABARAPO95166 117 aa13.15□□□□□ -0.3
CDT1-202ENST00000562747 OR3A3P47888 321 aa13.15□□□□□ -0.3
CDT1-202ENST00000562747 ALDH3B2P48448 385 aa13.15□□□□□ -0.3
CDT1-202ENST00000562747 GNG2P59768 71 aa13.15□□□□□ -0.3
CDT1-202ENST00000562747 VBP1P61758 197 aa13.15□□□□□ -0.3
CDT1-202ENST00000562747 OR10J5Q8NHC4 309 aa13.15□□□□□ -0.3
CDT1-202ENST00000562747 WIPF2Q8TF74 440 aaPredicted RBP13.15□□□□□ -0.3
CDT1-202ENST00000562747 MAFIPQ8WZ33 124 aa13.15□□□□□ -0.3
CDT1-202ENST00000562747 KCTD12Q96CX2 325 aaKnown RBP13.15□□□□□ -0.3
CDT1-202ENST00000562747 ZNF251Q9BRH9 671 aa13.15□□□□□ -0.3
CDT1-202ENST00000562747 MRPL20Q9BYC9 149 aaKnown RBP13.15□□□□□ -0.3
CDT1-202ENST00000562747 ABCG5Q9H222 651 aa13.15□□□□□ -0.3
CDT1-202ENST00000562747 RDH8Q9NYR8 311 aa13.15□□□□□ -0.3
CDT1-202ENST00000562747 PLXNB1O43157 2135 aa13.15□□□□□ -0.3
CDT1-202ENST00000562747 BET1O15155 118 aa13.14□□□□□ -0.31
CDT1-202ENST00000562747 TMEM95Q3KNT9 176 aa13.14□□□□□ -0.31
CDT1-202ENST00000562747 IGSF11Q5DX21 431 aa13.14□□□□□ -0.31
CDT1-202ENST00000562747 UBE2NLQ5JXB2 153 aa13.14□□□□□ -0.31
CDT1-202ENST00000562747 KPRPQ5T749 579 aaPredicted RBP13.14□□□□□ -0.31
CDT1-202ENST00000562747 SAMD5Q5TGI4 173 aa13.14□□□□□ -0.31
CDT1-202ENST00000562747 NUDCD2Q8WVJ2 157 aa13.14□□□□□ -0.31
CDT1-202ENST00000562747 ABHD14BQ96IU4 210 aa13.14□□□□□ -0.31
CDT1-202ENST00000562747 TRAV18A0A075B6X5 111 aa13.13□□□□□ -0.31
CDT1-202ENST00000562747 NCBP2LA6PVI3 153 aaKnown RBP13.13□□□□□ -0.31
CDT1-202ENST00000562747 TFAP2AP05549 437 aa13.13□□□□□ -0.31
CDT1-202ENST00000562747 CTF1Q16619 201 aa13.13□□□□□ -0.31
CDT1-202ENST00000562747 RPL39P5Q59GN2 51 aa13.13□□□□□ -0.31
CDT1-202ENST00000562747 C9orf152Q5JTZ5 239 aa13.13□□□□□ -0.31
CDT1-202ENST00000562747 GPR141Q7Z602 305 aa13.13□□□□□ -0.31
CDT1-202ENST00000562747 Q8N9W7 124 aa13.13□□□□□ -0.31
CDT1-202ENST00000562747 S100A16Q96FQ6 103 aaKnown RBP13.13□□□□□ -0.31
CDT1-202ENST00000562747 GINS4Q9BRT9 223 aa13.13□□□□□ -0.31
CDT1-202ENST00000562747 ST6GALNAC5Q9BVH7 336 aa13.13□□□□□ -0.31
CDT1-202ENST00000562747 LIN7CQ9NUP9 197 aaKnown RBP13.13□□□□□ -0.31
CDT1-202ENST00000562747 ZNF221Q9UK13 617 aa13.13□□□□□ -0.31
CDT1-202ENST00000562747 IGKV1D-8A0A087WSZ0 117 aa13.12□□□□□ -0.31
CDT1-202ENST00000562747 OR5H14A6NHG9 310 aa13.12□□□□□ -0.31
CDT1-202ENST00000562747 SH2D7A6NKC9 451 aaPredicted RBP13.12□□□□□ -0.31
CDT1-202ENST00000562747 XRCC3O43542 346 aa13.12□□□□□ -0.31
CDT1-202ENST00000562747 SSX5O60225 188 aa13.12□□□□□ -0.31
CDT1-202ENST00000562747 FBXO24O75426 580 aa13.12□□□□□ -0.31
CDT1-202ENST00000562747 CTXN2P0C2S0 81 aa13.12□□□□□ -0.31
CDT1-202ENST00000562747 GPR107Q5VW38 600 aa13.12□□□□□ -0.31
CDT1-202ENST00000562747 C11orf44Q8N8P7 122 aa13.12□□□□□ -0.31
CDT1-202ENST00000562747 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.12□□□□□ -0.31
CDT1-202ENST00000562747 NAA50Q9GZZ1 169 aaKnown RBP13.12□□□□□ -0.31
CDT1-202ENST00000562747 PLSCR3Q9NRY6 295 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms