RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 IFI27L2Q9H2X8 130 aa10.04□□□□□ -0.8
SF3B3-202ENST00000562722 RNF150Q9ULK6 438 aa10.04□□□□□ -0.8
SF3B3-202ENST00000562722 FBXO7Q9Y3I1 522 aa10.04□□□□□ -0.8
SF3B3-202ENST00000562722 DNAH7Q8WXX0 4024 aa10.04□□□□□ -0.8
SF3B3-202ENST00000562722 STAB2Q8WWQ8 2551 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 TRIM64CA6NLI5 447 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 RRHO14718 337 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 MYL12BO14950 172 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 RAB29O14966 203 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 SOX15O60248 233 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 CELP19835 753 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 MAPK3P27361 379 aaPredicted RBP10.03□□□□□ -0.8
SF3B3-202ENST00000562722 TPPP2P59282 170 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 CX3CL1P78423 397 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 ST3GAL4Q11206 333 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 ACTBL2Q562R1 376 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 RPL39P5Q59GN2 51 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 PYHIN1Q6K0P9 492 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 FAM71F2Q6NXP2 309 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 ACSM6Q6P461 480 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 UNQ5815/PRO19632Q6UWF5 114 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 GLDNQ6ZMI3 551 aaPredicted RBP10.03□□□□□ -0.8
SF3B3-202ENST00000562722 PPP1R27Q86WC6 154 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 SETD9Q8NE22 299 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 FLYWCH2Q96CP2 140 aaKnown RBP10.03□□□□□ -0.8
SF3B3-202ENST00000562722 CLCC1Q96S66 551 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 SULT4A1Q9BR01 284 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 FAAP24Q9BTP7 215 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 RSRP1Q9BUV0 290 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 PIPOXQ9P0Z9 390 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 GHRLQ9UBU3 117 aa10.03□□□□□ -0.8
SF3B3-202ENST00000562722 OR5H14A6NHG9 310 aa10.02□□□□□ -0.81
SF3B3-202ENST00000562722 HMGN3Q15651 99 aa10.02□□□□□ -0.81
SF3B3-202ENST00000562722 LY6G6FQ5SQ64 297 aa10.02□□□□□ -0.81
SF3B3-202ENST00000562722 TTC23Q5W5X9 447 aa10.02□□□□□ -0.81
SF3B3-202ENST00000562722 ZFAND6Q6FIF0 208 aa10.02□□□□□ -0.81
SF3B3-202ENST00000562722 OR10K2Q6IF99 312 aa10.02□□□□□ -0.81
SF3B3-202ENST00000562722 C6orf201Q7Z4U5 140 aa10.02□□□□□ -0.81
SF3B3-202ENST00000562722 HAPLN4Q86UW8 402 aa10.02□□□□□ -0.81
SF3B3-202ENST00000562722 THRSPQ92748 146 aa10.02□□□□□ -0.81
SF3B3-202ENST00000562722 GGHQ92820 318 aa10.02□□□□□ -0.81
SF3B3-202ENST00000562722 FAM103A1Q9BTL3 118 aaKnown RBP10.02□□□□□ -0.81
SF3B3-202ENST00000562722 ELOVL1Q9BW60 279 aa10.02□□□□□ -0.81
SF3B3-202ENST00000562722 TMEM59Q9BXS4 323 aa10.02□□□□□ -0.81
SF3B3-202ENST00000562722 SLC23A1Q9UHI7 598 aa10.02□□□□□ -0.81
SF3B3-202ENST00000562722 WASHC3Q9Y3C0 194 aa10.02□□□□□ -0.81
SF3B3-202ENST00000562722 EFCAB10A6NFE3 127 aa10.01□□□□□ -0.81
SF3B3-202ENST00000562722 FCN1O00602 326 aa10.01□□□□□ -0.81
SF3B3-202ENST00000562722 HSPB1P04792 205 aaKnown RBP10.01□□□□□ -0.81
SF3B3-202ENST00000562722 UBBP0CG47 229 aa10.01□□□□□ -0.81
SF3B3-202ENST00000562722 CT45A6P0DMU7 189 aa10.01□□□□□ -0.81
SF3B3-202ENST00000562722 CT45A5P0DMU8 189 aa10.01□□□□□ -0.81
SF3B3-202ENST00000562722 CT45A7P0DMV0 189 aa10.01□□□□□ -0.81
SF3B3-202ENST00000562722 MC5RP33032 325 aa10.01□□□□□ -0.81
SF3B3-202ENST00000562722 CRIP2P52943 208 aaPredicted RBP10.01□□□□□ -0.81
SF3B3-202ENST00000562722 C19orf54Q5BKX5 351 aa10.01□□□□□ -0.81
SF3B3-202ENST00000562722 C6orf141Q5SZD1 244 aa10.01□□□□□ -0.81
SF3B3-202ENST00000562722 ANKRD13BQ86YJ7 626 aa10.01□□□□□ -0.81
SF3B3-202ENST00000562722 SGPP2Q8IWX5 399 aa10.01□□□□□ -0.81
SF3B3-202ENST00000562722 SVOPQ8N4V2 548 aa10.01□□□□□ -0.81
SF3B3-202ENST00000562722 ZNF485Q8NCK3 441 aa10.01□□□□□ -0.81
SF3B3-202ENST00000562722 ABHD14BQ96IU4 210 aa10.01□□□□□ -0.81
SF3B3-202ENST00000562722 ZNF355PQ9NSJ1 428 aa10.01□□□□□ -0.81
SF3B3-202ENST00000562722 GAR1Q9NY12 217 aaKnown RBP10.01□□□□□ -0.81
SF3B3-202ENST00000562722 METTL1Q9UBP6 276 aaKnown RBP10.01□□□□□ -0.81
SF3B3-202ENST00000562722 GAB2Q9UQC2 676 aa10.01□□□□□ -0.81
SF3B3-202ENST00000562722 H0YJW9 148 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 LDLRAD4O15165 306 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 HSPA12AO43301 675 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 RBBP9O75884 186 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 CA2P00918 260 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 TRGV3P03979 118 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 CPEP16870 476 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 WNT4P56705 351 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 RPS27AP62979 156 aaKnown RBP10□□□□□ -0.81
SF3B3-202ENST00000562722 RBM48Q5RL73 367 aaKnown RBP10□□□□□ -0.81
SF3B3-202ENST00000562722 GLT8D1Q68CQ7 371 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 CD200R1LQ6Q8B3 271 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 AHSA2Q719I0 299 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 MOB1BQ7L9L4 216 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 LYPD6Q86Y78 171 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 LFNGQ8NES3 379 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 GRPEL2Q8TAA5 225 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 PARP12Q9H0J9 701 aaKnown RBP10□□□□□ -0.81
SF3B3-202ENST00000562722 SLA2Q9H6Q3 261 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 TPSG1Q9NRR2 321 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 CNOT2Q9NZN8 540 aaKnown RBP10□□□□□ -0.81
SF3B3-202ENST00000562722 STUB1Q9UNE7 303 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 NUBP2Q9Y5Y2 271 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 SACSQ9NZJ4 4579 aa10□□□□□ -0.81
SF3B3-202ENST00000562722 EPPK1P58107 5090 aaKnown RBP9.99□□□□□ -0.81
SF3B3-202ENST00000562722 C13orf42A0A1B0GVH6 325 aa9.99□□□□□ -0.81
SF3B3-202ENST00000562722 IGHV4-30-4P0DP06 118 aa9.99□□□□□ -0.81
SF3B3-202ENST00000562722 EGR2P11161 476 aaPredicted RBP9.99□□□□□ -0.81
SF3B3-202ENST00000562722 HTR2CP28335 458 aa9.99□□□□□ -0.81
SF3B3-202ENST00000562722 INSL4Q14641 139 aa9.99□□□□□ -0.81
SF3B3-202ENST00000562722 PSG5Q15238 335 aa9.99□□□□□ -0.81
SF3B3-202ENST00000562722 AKIRIN2Q53H80 203 aa9.99□□□□□ -0.81
SF3B3-202ENST00000562722 DHRSXQ8N5I4 330 aa9.99□□□□□ -0.81
SF3B3-202ENST00000562722 DRAXINQ8NBI3 349 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms