RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 RPL39P5Q59GN2 51 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 LRRTM1Q86UE6 522 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 DHRSXQ8N5I4 330 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 IL1F10Q8WWZ1 152 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 NEDD4LQ96PU5 975 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 NICN1Q9BSH3 213 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 TOLLIPQ9H0E2 274 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 PARP12Q9H0J9 701 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 KCNK15Q9H427 330 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 FBXL15Q9H469 300 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 STEAP1Q9UHE8 339 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 LRRC42Q9Y546 428 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 LYSTQ99698 3801 aa12.9□□□□□ -0.34
VPS9D1-AS1-201ENST00000562298 IGHV4OR15-8A0A075B7B6 117 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 A0A087WW49 117 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 RRHO14718 337 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 RAB29O14966 203 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 NAPSAO96009 420 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 LGALS1P09382 135 aaKnown RBP12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 UBBP0CG47 229 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 SNRPBP14678 240 aaKnown RBP12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 SPNP16150 400 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 CX3CL1P78423 397 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 UNC119Q13432 240 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 ZNF660Q6AZW8 331 aaPredicted RBP12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 ZNF880Q6PDB4 577 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 GLDNQ6ZMI3 551 aaPredicted RBP12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 OVCH2Q7RTZ1 564 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 PACRGLQ8N7B6 248 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 NANOGP1Q8N7R0 232 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 THRSPQ92748 146 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 RCHY1Q96PM5 261 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 PIPOXQ9P0Z9 390 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 ABRACLQ9P1F3 81 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 SLC23A1Q9UHI7 598 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 FOXA2Q9Y261 457 aaPredicted RBP12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 A3GALT2U3KPV4 340 aa12.89□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 CSMD3Q7Z407 3707 aa12.88□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 LINC01619G3V211 115 aa12.88□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 FRMD6-AS1P0C7T7 363 aa12.88□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 GP9P14770 177 aa12.88□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 GABPB1Q06547 395 aaPredicted RBP12.88□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 ACSM3Q53FZ2 586 aa12.88□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 C1orf100Q5SVJ3 147 aa12.88□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 FBLIM1Q8WUP2 373 aa12.88□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 ARPC1AQ92747 370 aa12.88□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 TM2D1Q9BX74 207 aa12.88□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 TMEM59Q9BXS4 323 aa12.88□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 PLCXD1Q9NUJ7 323 aa12.88□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 FKBP14Q9NWM8 211 aa12.88□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 GAB2Q9UQC2 676 aa12.88□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 ERGIC3Q9Y282 383 aa12.88□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 NUBP2Q9Y5Y2 271 aa12.88□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 STARD9Q9P2P6 4700 aa12.87□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 A0A0A6YYD4 124 aa12.87□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 OR5H14A6NHG9 310 aa12.87□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 H0YJW9 148 aa12.87□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 QRFPP83859 136 aa12.87□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 CASC10Q5T4H9 136 aa12.87□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 ACSM6Q6P461 480 aa12.87□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 CD200R1LQ6Q8B3 271 aa12.87□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 C8orf59Q8N0T1 100 aaPredicted RBP12.87□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 TCTEX1D1Q8N7M0 179 aa12.87□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 MUC7Q8TAX7 377 aa12.87□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 SETD6Q8TBK2 473 aa12.87□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 ABHD14BQ96IU4 210 aa12.87□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 AGMATQ9BSE5 352 aa12.87□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 FAM103A1Q9BTL3 118 aaKnown RBP12.87□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 CHMP1AQ9HD42 196 aaPredicted RBP12.87□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 C8orf4Q9NR00 106 aa12.87□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 TRIM64CA6NLI5 447 aa12.86□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 TMEM14DPA8MWL7 114 aa12.86□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 IGHV3-11P01762 117 aa12.86□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 PLGLAQ15195 96 aa12.86□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 RBM48Q5RL73 367 aaKnown RBP12.86□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 GLT8D1Q68CQ7 371 aa12.86□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 BPIFB6Q8NFQ5 453 aa12.86□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 OR5AN1Q8NGI8 311 aa12.86□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 KCNG3Q8TAE7 436 aa12.86□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 ABHD5Q8WTS1 349 aa12.86□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 PHYHIPQ92561 330 aa12.86□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 HDHD3Q9BSH5 251 aaPredicted RBP12.86□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 TMED9Q9BVK6 235 aa12.86□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 OR1A1Q9P1Q5 309 aa12.86□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 WASHC3Q9Y3C0 194 aa12.86□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 H7C2Y5 167 aa12.85□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 ITGB1BP1O14713 200 aa12.85□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 SLC22A1O15245 554 aa12.85□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 PROP1O75360 226 aa12.85□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 GSTP1P09211 210 aaKnown RBP12.85□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 OR8U9P0C7N5 309 aa12.85□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 CD37P11049 281 aa12.85□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 MC5RP33032 325 aa12.85□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 ACTBL2Q562R1 376 aa12.85□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 PYHIN1Q6K0P9 492 aa12.85□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 MOB1BQ7L9L4 216 aa12.85□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 PPP1R27Q86WC6 154 aa12.85□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 MS4A15Q8N5U1 240 aa12.85□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 LFNGQ8NES3 379 aa12.85□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 OR6Q1Q8NGQ2 317 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms