RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 C6orf15Q6UXA7 325 aaPredicted RBP11.36□□□□□ -0.59
CLK3-206ENST00000562078 LHFPL4Q7Z7J7 247 aa11.36□□□□□ -0.59
CLK3-206ENST00000562078 MYPOPQ86VE0 399 aaPredicted RBP11.36□□□□□ -0.59
CLK3-206ENST00000562078 MCEMP1Q8IX19 187 aa11.36□□□□□ -0.59
CLK3-206ENST00000562078 FADS6Q8N9I5 356 aa11.36□□□□□ -0.59
CLK3-206ENST00000562078 PXMP4Q9Y6I8 212 aa11.36□□□□□ -0.59
CLK3-206ENST00000562078 SHANK1Q9Y566 2161 aa11.36□□□□□ -0.59
CLK3-206ENST00000562078 DMXL1Q9Y485 3027 aa11.36□□□□□ -0.59
CLK3-206ENST00000562078 ZFHX2Q9C0A1 2572 aaPredicted RBP11.36□□□□□ -0.59
CLK3-206ENST00000562078 FOXI3A8MTJ6 420 aaPredicted RBP11.36□□□□□ -0.59
CLK3-206ENST00000562078 C9orf172C9J069 976 aa11.36□□□□□ -0.59
CLK3-206ENST00000562078 G3V3Y1 287 aa11.36□□□□□ -0.59
CLK3-206ENST00000562078 ANOS1P23352 680 aa11.36□□□□□ -0.59
CLK3-206ENST00000562078 ADMP35318 185 aa11.36□□□□□ -0.59
CLK3-206ENST00000562078 CTRLP40313 264 aa11.36□□□□□ -0.59
CLK3-206ENST00000562078 FOLR3P41439 243 aa11.36□□□□□ -0.59
CLK3-206ENST00000562078 CLUHP3Q96NS8 147 aa11.36□□□□□ -0.59
CLK3-206ENST00000562078 RBM24Q9BX46 236 aaKnown RBP11.36□□□□□ -0.59
CLK3-206ENST00000562078 UQCR10Q9UDW1 63 aa11.36□□□□□ -0.59
CLK3-206ENST00000562078 ZNF814B7Z6K7 855 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 SYNGR4O95473 234 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 FTH1P19P0C7X4 201 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 CCL3P10147 92 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 BMI1P35226 326 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 RPS18P62269 152 aaKnown RBP11.35□□□□□ -0.59
CLK3-206ENST00000562078 UEVLDQ8IX04 471 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 FAM89BQ8N5H3 189 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 DYRK2Q92630 601 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 ATP5SQ99766 215 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 AGMATQ9BSE5 352 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 HSPB7Q9UBY9 170 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 ST3GAL6Q9Y274 331 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 ARHGAP21Q5T5U3 1957 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 A0A1W2PNU3 283 aaPredicted RBP11.35□□□□□ -0.59
CLK3-206ENST00000562078 ZNF850A8MQ14 1090 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 SERF1AO75920 110 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 OPRM1P35372 400 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 MRGPRGQ86SM5 289 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 OR4B1Q8NGF8 309 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 OR2D3Q8NGH3 330 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 OR2V1Q8NHB1 315 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 BTF3L4Q96K17 158 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 PLK3Q9H4B4 646 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 ANXA10Q9UJ72 324 aa11.35□□□□□ -0.59
CLK3-206ENST00000562078 KNTC1P50748 2209 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 CLEC18AA5D8T8 446 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 ZNF737O75373 536 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 IGLC2P0DOY2 106 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 IGLC3P0DOY3 106 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 SRP14P37108 136 aaKnown RBP11.34□□□□□ -0.59
CLK3-206ENST00000562078 FFAR4Q5NUL3 377 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 CLEC18CQ8NCF0 446 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 OR5AU1Q8NGC0 362 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 OR56B2PQ8NGI1 322 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 CT55Q8WUE5 264 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 WDYHV1Q96HA8 205 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 PARLQ9H300 379 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 KLHL13Q9P2N7 655 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 FBXL7Q9UJT9 491 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 RTTNQ86VV8 2226 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 TRAF3IP2O43734 574 aaPredicted RBP11.34□□□□□ -0.59
CLK3-206ENST00000562078 AADACP22760 399 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 SSR4P51571 173 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 CLRN1P58418 232 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 KRTDAPP60985 99 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 SUMO1P63165 101 aaKnown RBP11.34□□□□□ -0.59
CLK3-206ENST00000562078 PAFAH1B2P68402 229 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 MORN2Q502X0 79 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 CARD17Q5XLA6 110 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 KCNIP4Q6PIL6 250 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 Q8N976 141 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 C11orf40Q8WZ69 217 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 ANAPC16Q96DE5 110 aa11.34□□□□□ -0.59
CLK3-206ENST00000562078 SERPINE3A8MV23 424 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 F2Z2F3 143 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 H3BP45 60 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 NDUFS8O00217 210 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 SH2D1BO14796 132 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 TNFSF15O95150 251 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 GYPAP02724 150 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 TESK1Q15569 626 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 VAMP3Q15836 100 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 ABHD12BQ7Z5M8 362 aaPredicted RBP11.33□□□□□ -0.6
CLK3-206ENST00000562078 MBD3L1Q8WWY6 194 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 FAM71F1Q96KD3 344 aaPredicted RBP11.33□□□□□ -0.6
CLK3-206ENST00000562078 FAM103A1Q9BTL3 118 aaKnown RBP11.33□□□□□ -0.6
CLK3-206ENST00000562078 MRPL13Q9BYD1 178 aaKnown RBP11.33□□□□□ -0.6
CLK3-206ENST00000562078 PCSK5Q92824 1860 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 DOCK11Q5JSL3 2073 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 RIF1Q5UIP0 2472 aaKnown RBP11.33□□□□□ -0.6
CLK3-206ENST00000562078 IGKV1-9A0A0C4DH69 117 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 AQP7P3A6NL99 342 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 SMPD2O60906 423 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 MMP23AO75900 390 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 OTX2P32243 289 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 MEF2BQ02080 365 aaPredicted RBP11.33□□□□□ -0.6
CLK3-206ENST00000562078 MSMO1Q15800 293 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 RPS19BP1Q86WX3 136 aaKnown RBP11.33□□□□□ -0.6
CLK3-206ENST00000562078 GPR146Q96CH1 333 aa11.33□□□□□ -0.6
CLK3-206ENST00000562078 REPIN1Q9BWE0 567 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms