RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 RAMP3O60896 148 aa15.93■□□□□ 0.14
RAB40C-206ENST00000561781 CD38P28907 300 aa15.93■□□□□ 0.14
RAB40C-206ENST00000561781 RRADP55042 308 aa15.93■□□□□ 0.14
RAB40C-206ENST00000561781 SSC4DQ8WTU2 575 aa15.93■□□□□ 0.14
RAB40C-206ENST00000561781 SIGLEC12Q96PQ1 595 aa15.93■□□□□ 0.14
RAB40C-206ENST00000561781 TMEM222Q9H0R3 208 aa15.93■□□□□ 0.14
RAB40C-206ENST00000561781 TBL2Q9Y4P3 447 aaKnown RBP15.93■□□□□ 0.14
RAB40C-206ENST00000561781 TNRC6BQ9UPQ9 1833 aaKnown RBP15.93■□□□□ 0.14
RAB40C-206ENST00000561781 TDRD6O60522 2096 aaKnown RBP15.93■□□□□ 0.14
RAB40C-206ENST00000561781 DPRXA6NFQ7 191 aa15.93■□□□□ 0.14
RAB40C-206ENST00000561781 CHST1O43916 411 aa15.93■□□□□ 0.14
RAB40C-206ENST00000561781 CELA2BP08218 269 aaPredicted RBP15.93■□□□□ 0.14
RAB40C-206ENST00000561781 IL11P20809 199 aa15.93■□□□□ 0.14
RAB40C-206ENST00000561781 FUT7Q11130 342 aa15.93■□□□□ 0.14
RAB40C-206ENST00000561781 SGMS2Q8NHU3 365 aa15.93■□□□□ 0.14
RAB40C-206ENST00000561781 C11orf40Q8WZ69 217 aa15.93■□□□□ 0.14
RAB40C-206ENST00000561781 B4DGG1 531 aa15.92■□□□□ 0.14
RAB40C-206ENST00000561781 TESK1Q15569 626 aa15.92■□□□□ 0.14
RAB40C-206ENST00000561781 KISS1Q15726 138 aa15.92■□□□□ 0.14
RAB40C-206ENST00000561781 OR4F17Q8NGA8 305 aa15.92■□□□□ 0.14
RAB40C-206ENST00000561781 OR8B12Q8NGG6 310 aa15.92■□□□□ 0.14
RAB40C-206ENST00000561781 CLPSP04118 112 aa15.92■□□□□ 0.14
RAB40C-206ENST00000561781 UCP1P25874 307 aa15.92■□□□□ 0.14
RAB40C-206ENST00000561781 ARG2P78540 354 aa15.92■□□□□ 0.14
RAB40C-206ENST00000561781 PAX2Q02962 417 aa15.92■□□□□ 0.14
RAB40C-206ENST00000561781 PMCHL1Q16048 86 aa15.92■□□□□ 0.14
RAB40C-206ENST00000561781 CRIP3Q6Q6R5 217 aa15.92■□□□□ 0.14
RAB40C-206ENST00000561781 S100A7AQ86SG5 101 aa15.92■□□□□ 0.14
RAB40C-206ENST00000561781 PRR22Q8IZ63 422 aa15.92■□□□□ 0.14
RAB40C-206ENST00000561781 CCL4L1Q8NHW4 92 aa15.92■□□□□ 0.14
RAB40C-206ENST00000561781 BAHD1Q8TBE0 780 aaPredicted RBP15.92■□□□□ 0.14
RAB40C-206ENST00000561781 CPT1CQ8TCG5 803 aa15.92■□□□□ 0.14
RAB40C-206ENST00000561781 SGCZQ96LD1 299 aa15.92■□□□□ 0.14
RAB40C-206ENST00000561781 MOB1AQ9H8S9 216 aa15.92■□□□□ 0.14
RAB40C-206ENST00000561781 ADAM20O43506 726 aa15.91■□□□□ 0.14
RAB40C-206ENST00000561781 REG1AP05451 166 aa15.91■□□□□ 0.14
RAB40C-206ENST00000561781 OPRM1P35372 400 aa15.91■□□□□ 0.14
RAB40C-206ENST00000561781 PRRX1P54821 245 aa15.91■□□□□ 0.14
RAB40C-206ENST00000561781 PET117Q6UWS5 81 aa15.91■□□□□ 0.14
RAB40C-206ENST00000561781 TMEM108Q6UXF1 575 aa15.91■□□□□ 0.14
RAB40C-206ENST00000561781 SFTPA2Q8IWL1 248 aa15.91■□□□□ 0.14
RAB40C-206ENST00000561781 WFDC12Q8WWY7 111 aa15.91■□□□□ 0.14
RAB40C-206ENST00000561781 ASB10Q8WXI3 467 aa15.91■□□□□ 0.14
RAB40C-206ENST00000561781 OR1E3Q8WZA6 343 aa15.91■□□□□ 0.14
RAB40C-206ENST00000561781 NEIL1Q96FI4 390 aaPredicted RBP15.91■□□□□ 0.14
RAB40C-206ENST00000561781 KLHDC7BQ96G42 594 aa15.91■□□□□ 0.14
RAB40C-206ENST00000561781 CCDC3Q9BQI4 270 aa15.91■□□□□ 0.14
RAB40C-206ENST00000561781 MRPL18Q9H0U6 180 aaKnown RBP15.91■□□□□ 0.14
RAB40C-206ENST00000561781 FAM186AA6NE01 2351 aa15.91■□□□□ 0.14
RAB40C-206ENST00000561781 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 TAX1BP3O14907 124 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 MPPED1O15442 326 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 TNFSF12O43508 249 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 PIAS2O75928 621 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 EIF3IQ13347 325 aaKnown RBP15.9■□□□□ 0.14
RAB40C-206ENST00000561781 C1orf61Q13536 156 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 DEFB110Q30KQ9 67 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 SAMD13Q5VXD3 122 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 FAM180AQ6UWF9 173 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 UEVLDQ8IX04 471 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 UBE2J1Q9Y385 318 aaPredicted RBP15.9■□□□□ 0.14
RAB40C-206ENST00000561781 TRAV9-1A0A075B6T8 112 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 TMED7-TICAM2A0A0A6YYA0 188 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 J3QR06 171 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 OR7C2O60412 319 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 KCNK17Q96T54 332 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 NXF5Q9H1B4 397 aaKnown RBP15.9■□□□□ 0.14
RAB40C-206ENST00000561781 FAM60AQ9NP50 221 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 PRTFDC1Q9NRG1 225 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 SMPXQ9UHP9 88 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 TMEM131Q92545 1883 aa15.9■□□□□ 0.14
RAB40C-206ENST00000561781 NPIPA5E9PKD4 350 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 SCGB1A1P11684 91 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 AMTP48728 403 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 PAX9P55771 341 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 TMEM95Q3KNT9 176 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 AMMECR1LQ6DCA0 310 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 ASCL5Q7RTU5 278 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 GMPPAQ96IJ6 420 aaPredicted RBP15.89■□□□□ 0.13
RAB40C-206ENST00000561781 MED29Q9NX70 200 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 NPIPA1Q9UND3 350 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 SAA2-SAA4A0A096LPE2 208 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 A0A1B0GV72 72 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 PRSS38A1L453 326 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 G3V4G9 280 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 RBFOX2O43251 390 aaKnown RBP eCLIP15.89■□□□□ 0.13
RAB40C-206ENST00000561781 ATXN8OSP0DMR3 200 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 GP1BBP13224 206 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 LGALS7P47929 136 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 ZNF121P58317 390 aaPredicted RBP15.89■□□□□ 0.13
RAB40C-206ENST00000561781 WFDC8Q8IUA0 241 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 POLR1DQ9Y2S0 133 aa15.89■□□□□ 0.13
RAB40C-206ENST00000561781 SPTY2D1-AS1A0A0U1RR47 76 aa15.88■□□□□ 0.13
RAB40C-206ENST00000561781 ODAMA1E959 279 aa15.88■□□□□ 0.13
RAB40C-206ENST00000561781 C17orf112F2Z3M2 114 aa15.88■□□□□ 0.13
RAB40C-206ENST00000561781 TMPRSS2O15393 492 aa15.88■□□□□ 0.13
RAB40C-206ENST00000561781 CLDN15P56746 228 aa15.88■□□□□ 0.13
RAB40C-206ENST00000561781 IGLV3-21P80748 117 aaPredicted RBP15.88■□□□□ 0.13
RAB40C-206ENST00000561781 SELENOHQ8IZQ5 122 aaKnown RBP15.88■□□□□ 0.13
RAB40C-206ENST00000561781 OR5P3Q8WZ94 311 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms