RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 LINC01387J3KSC0 135 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 IBA57Q5T440 356 aaKnown RBP8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 RBKSQ9H477 322 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 TMEM38BQ9NVV0 291 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 IL19Q9UHD0 177 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 MOSPD3O75425 235 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 MGPP08493 103 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 STAG3L2P0CL84 134 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 LY6DQ14210 128 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 NRN1LQ496H8 165 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 OR8B3Q8NGG8 313 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 ZNF385AQ96PM9 386 aaKnown RBP8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 CISD1Q9NZ45 108 aaKnown RBP8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 CD74P04233 296 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 SP9P0CG40 484 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 FABP2P12104 132 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 BMI1P35226 326 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 HIKESHIQ53FT3 197 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 TRBV5-7A0A0A0MS05 114 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 CARFQ8N187 725 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 ATG2BQ96BY7 2078 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 IGKV1-8A0A0C4DH67 115 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 PRR19A6NJB7 356 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 TMPRSS2O15393 492 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 AGAP20933 346 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 EFNB1P98172 346 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 DOLPP1Q86YN1 238 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 SFTPA2Q8IWL1 248 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 TPRX1Q8N7U7 411 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 ZNF441Q8N8Z8 693 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 RAB1CQ92928 201 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 OR2V2Q96R30 315 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 GPR35Q9HC97 309 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 KCNMB2Q9Y691 235 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 MS4A18H0YCH9 400 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 SRIP30626 198 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 CLDN18P56856 261 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 MS4A18Q3C1V0 323 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 TMEM108Q6UXF1 575 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 GBGT1Q8N5D6 347 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 MYOZ3Q8TDC0 251 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 FAM222BQ8WU58 562 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 SCNM1Q9BWG6 230 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 KLF3P57682 345 aaPredicted RBP8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 HERVK_113P61574 105 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 RPL30P62888 115 aaKnown RBP8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 PQLC2Q6ZP29 291 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 SELENOHQ8IZQ5 122 aaKnown RBP8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 PAXXQ9BUH6 204 aa8.85□□□□□ -0.99
GTF3C1-202ENST00000561623 SCN3AQ9NY46 2000 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 LY75O60449 1722 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 H7C2G1 150 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 DNLZQ5SXM8 178 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 ADTRPQ96IZ2 230 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 OR51B2Q9Y5P1 312 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 CACNA1BQ00975 2339 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 MSGN1A6NI15 193 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 H0Y980 276 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 IZUMO4Q1ZYL8 232 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 MOGAT3Q86VF5 341 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 TAF15Q92804 592 aaKnown RBP eCLIP8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 PARLQ9H300 379 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 F11RQ9Y624 299 aaKnown RBP8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 DNPH1O43598 174 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 TMEM183AQ8IXX5 376 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 OR10S1Q8NGN2 331 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 GPR146Q96CH1 333 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 SYNGR1O43759 233 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 CCL3P10147 92 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 GCSHP23434 173 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 MIC13Q5XKP0 118 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 POC1AQ8NBT0 407 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 J3QT63 122 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 PLAUP00749 431 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 HOXC4P09017 264 aaPredicted RBP8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 ZXDCQ2QGD7 858 aaPredicted RBP8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 OIT3Q8WWZ8 545 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 NUDT16L1Q9BRJ7 211 aaKnown RBP8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 LHX9Q9NQ69 397 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 PAPPAQ13219 1627 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 NHSL1Q5SYE7 1610 aa8.84□□□□□ -0.99
GTF3C1-202ENST00000561623 J3QR06 171 aa8.84□□□□□ -1
GTF3C1-202ENST00000561623 EGR1P18146 543 aa8.84□□□□□ -1
GTF3C1-202ENST00000561623 PMCHL1Q16048 86 aa8.84□□□□□ -1
GTF3C1-202ENST00000561623 RASL11BQ9BPW5 248 aa8.84□□□□□ -1
GTF3C1-202ENST00000561623 PRNDQ9UKY0 176 aa8.84□□□□□ -1
GTF3C1-202ENST00000561623 CARHSP1Q9Y2V2 147 aaKnown RBP8.84□□□□□ -1
GTF3C1-202ENST00000561623 MIA3Q5JRA6 1907 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 LOC107984156A0A0G2JMH3 177 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 SPINT1O43278 529 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 REG1BP48304 166 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 TWIST1Q15672 202 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 C12orf54Q6X4T0 127 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 ARL17AQ8IVW1 177 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 HARBI1Q96MB7 349 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 DHRS7CA6NNS2 312 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 AMY1AP04745 511 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 KLRB1Q12918 225 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 ZNF721Q8TF20 911 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms