RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 PKD1L1Q8TDX9 2849 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 IGHV3OR15-7A0A075B7D8 119 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 IGHV3OR16-10A0A075B7F0 116 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 TRBV23-1A0A0A0MS06 115 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 A0A1B0GUS0 222 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 PQLC2LA1A4F0 135 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 ZNF850A8MQ14 1090 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 FOXI3A8MTJ6 420 aaPredicted RBP5.63□□□□□ -1.51
SPG11-224ENST00000561268 RNASEK-C17orf49H0YIS7 233 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 M0R1W7 72 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 CDIPTO14735 213 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 HOXA3O43365 443 aaPredicted RBP5.63□□□□□ -1.51
SPG11-224ENST00000561268 RHBDL1O75783 438 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 SNAPINO95295 136 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 SFT2D2O95562 160 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 RLN2P04090 185 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 ACAA1P09110 424 aaPredicted RBP5.63□□□□□ -1.51
SPG11-224ENST00000561268 PGA5P0DJD9 388 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 FAHP16930 419 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 ERVK11-1P61568 191 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 IL15RAQ13261 267 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 UNC119Q13432 240 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 PPP1R1AQ13522 171 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 SRSF7Q16629 238 aaKnown RBP eCLIP5.63□□□□□ -1.51
SPG11-224ENST00000561268 GUCA2BQ16661 112 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 C2orf68Q2NKX9 166 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 CEACAM21Q3KPI0 293 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 LCE3BQ5TA77 95 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 HCP5Q6MZN7 132 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 FAAP20Q6NZ36 180 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 ALKAL2Q6UX46 152 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 VMO1Q7Z5L0 202 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 TRAPPC6BQ86SZ2 158 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 BAP18Q8IXM2 172 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 C3orf56Q8N813 242 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 POC1AQ8NBT0 407 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 OR5A2Q8NGI9 324 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 OR14K1Q8NGZ2 314 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 OR4K15Q8NH41 348 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 LYPD6BQ8NI32 183 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 NPRL2Q8WTW4 380 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 SSMEM1Q8WWF3 244 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 DYRK2Q92630 601 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 MRGPRFQ96AM1 343 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 SPSB1Q96BD6 273 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 RAB3CQ96E17 227 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 FAM71F1Q96KD3 344 aaPredicted RBP5.63□□□□□ -1.51
SPG11-224ENST00000561268 SMIM8Q96KF7 97 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 DUX5Q96PT3 197 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 CCL13Q99616 98 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 PDCD10Q9BUL8 212 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 TMEM59Q9BXS4 323 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 LPAR5Q9H1C0 372 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 CHMP1AQ9HD42 196 aaPredicted RBP5.63□□□□□ -1.51
SPG11-224ENST00000561268 C12orf4Q9NQ89 552 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 GPR84Q9NQS5 396 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 TAS2R3Q9NYW6 316 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 MBD2Q9UBB5 411 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 ZMAT5Q9UDW3 170 aaKnown RBP5.63□□□□□ -1.51
SPG11-224ENST00000561268 VSIG4Q9Y279 399 aa5.63□□□□□ -1.51
SPG11-224ENST00000561268 TMEM218A2RU14 115 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 FAM90A10PA6NDY2 464 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 FAM90A18PA6NE21 464 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 FAM90A16PA6NEW6 464 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 TMEM235A6NFC5 223 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 FAM90A20PA6NIJ5 464 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 NKX6-3A6NJ46 265 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 FAM90A8PA6NJQ4 464 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 FAM90A7PA6NKC0 464 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 OR2AT4A6NND4 320 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 FAM90A22PA8MWA6 464 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 FAM90A12PA8MX19 464 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 FAM90A5PA8MXJ8 464 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 FAM90A23PA8MXZ1 464 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 J3QT63 122 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 SPRY1O43609 319 aaPredicted RBP5.62□□□□□ -1.51
SPG11-224ENST00000561268 TSPAN9O75954 239 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 JTBO76095 146 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 SPDEFO95238 335 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 FAM90A15PP0C7V4 464 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 FAM90A13PP0C7W8 464 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 FAM90A14PP0C7W9 464 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 FAM90A24PP0C7X0 464 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 PSG2P11465 335 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 ZNF20P17024 532 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 MDKP21741 143 aaPredicted RBP5.62□□□□□ -1.51
SPG11-224ENST00000561268 DTYMKP23919 212 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 IER3P46695 156 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 RAB5CP51148 216 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 GPM6AP51674 278 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 BLOC1S1P78537 153 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 S100A12P80511 92 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 PLA2G7Q13093 441 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 LRRC10Q5BKY1 277 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 DHRS7BQ6IAN0 325 aaPredicted RBP5.62□□□□□ -1.51
SPG11-224ENST00000561268 ASCL4Q6XD76 172 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 ACP7Q6ZNF0 438 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 C11orf42Q8N5U0 333 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 LRTM2Q8N967 370 aa5.62□□□□□ -1.51
SPG11-224ENST00000561268 BOLLQ8N9W6 283 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms